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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101115g3.7776.mrna |
| Orig protein id | gnl|cribi|Naga_101115g3.7776 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:1115645..1117749 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3747 ID=rna3747|Name=rna3747|organism=Nannochloropsis gaditana|type=mRNA|length=1503bp
AAGTGGAGGCCTCCATCAGAGGGAAAAGCCGCTCCTCCCATCCACTCAAA
GGGAGCAGTACCGCCGGCGCCACCGTTGCGTCCTCGCTCGCTTCCTCTCT
CCCTTCCTCCCTTCCTGCCTCCAGCGTGGCCTGGGAAGGTGGTTTGTCGT
TGGAGGGAGGAAAAGTTGAGGGCTGCGGGGCAGAAGAGAGCATCGCATAC
AAAGACAGCAGCACCAGAGCCGAGAACGGAGGGCGGGCAGGCGCTTCTCC
CTCCCCCCTCCCTCCCCCCCTTCCTCCTCCTACCCCCTGCTCCACAGTGG
ATCCATGACGGTGAAAAGGGAAGGAGGAGGGGAACGAGGAGGGGAGGAAA
GGAGGAGGGGAGCTGCAGAGATCGAAGCGGCACAGAGCTTGATGCGATTC
ATGGCGAGCCCTCTCGGCTCCCGGTCGTCCTCCTCCCCTCCCGACGCGGA
CCCGGACTCGGCGTGATGGAAGTTTCTGGAAGGTGAGGGGGAGAGAAGGC
CGGGCAGTCTCCAGATTAGGCACAAAAAGGCAGGCGCTCTTGGGAGGAGG
GGATCGGGGAGGCAAATGAAACAGGGAGGAGGCGCCATGGCGGGGGAGCG
CGGATGGGTATGCTCGGTGATGAGGACCATGCACAGGCGTGAGAAATACT
GTGATGTGTCGAAGCCAAAGAAATGCCAGCCACATTGTAGAGAAGAAGGA
GAGGAGGGGGGGGGGGACGCGGAGAGGGGAGGAGGGGAAGGAGGGCGTGA
AGGAGGAAGGGAGGGAGAGAGAAAATCAGCCACGCCCTCACAGTTTCATG
CATTTTATACGAAAGTGGAGCCGCGTCTGTGCGTGTACTGTAGTTAGTCA
TCATCCTTGCGTGCAAACTGCGCGCGGCATGTCCGTGGCGGAGGCAGGTG
CCGGTCCGGTGGGAAGGGAAGAAGGGGTGGAGAAGGGGGCAGGCCGAGTG
TAGTGTAGAATTTGATAGGGCACCATTTTCGCCAGTAATGTTTGTCGTGC
AGCGAGTGCCGCGCGAGCGAAGTGGCGTGGATGTACGTAGAATGGTAGGA
TTAATAAAACTTCCGAACACTTTTTTTAATTGCTCGACTTACGTCGGTGC
GTGGCGCGTTGTTTTGGTTTTGGGGAGGAACGGCTATCAGTATGATTGGC
TTCCGTAAAACTCTGATGCGTGTGCTAAGAATCTGACACGACGCGCTCAC
CCTTGCTTAAGTCATACAAAGCCGTGAAAGACGTCACAGCCATGGCAGTT
CGTTTCATTCAAATTTTAGTCCTTCTGCAAACAACAAAAGTCTCGATAGC
GAGTAAAATTAAGTCAAAGAGGTGCACTGTCTCACACGTAAGAGGAACTA
GAAGAAGGGGGGGAAAATCAAATGAGGGCTCCCTGAAAGCCCCGAGGGAC
ACGCACTACAGCCTCTGAGAGCAGCATGTGGGCTCCGATAAAGAGTAAGA
AAAGTGGTGTGGGACGCATGGGAGAGAGAAGAATAATTAAGCAAACAACT
CCA back to topprotein sequence of rna3747 >rna3747-protein ID=rna3747-protein|Name=rna3747|organism=Nannochloropsis gaditana|type=polypeptide|length=175bp
MGREAGHPVAGNVESGREEDEMGECKKEKAMTSTCTHASDVALKRHKPRA
CAKGLDRSLLYDSIQLHLMPVPRRRHPLPALRPSYPSPCSNHQAVRTPPF
PPHPSTRGRWRDARGPSKCVERIGSRPGRQAESLRLPREGGREEGGVRTL
LGGVKAMMSLLSPLPPLLAPNLHAS back to topmRNA from alignment at CM002461.1:1115645..1117749- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3747 ID=rna3747|Name=rna3747|organism=Nannochloropsis gaditana|type=mRNA|length=2105bp|location=Sequence derived from alignment at CM002461.1:1115645..1117749- (Nannochloropsis gaditana)
GAGAGAGGGCATAAACTTCCTGAGTCTTCAGCGGACAGAAGAGGTGGGAG
AAGGAATGACCTCGAAAAAGCGATGCTTGTAGAGAGTCATCAAAGGTCGT
TTGGTGTCATTCCGCATCGATTTGTCAGCTTAAATGTACAGTGGTGCGTT
TGTGGACCGCGTTATGCACGGTAATGAGCAAATTTTGGAACGAGGGAGGG
CGGCGGGAAGTCTATCGTAAGAAGCACGCTCTATTGGCTATCTCATGCAT
CGTACAACACATGAAGAAGTGCGGTTTCCCGGGGACGTAATTGTTTCTTG
GGTCCTCTTTTTTTTTAGCGCATCGGGGAAAAATCTATCCATGTCACTCG
AGAAGAATTTGGTCAGATACATGGTATGCGACAATCTGGTCAAAGGGCTT
GAGGTGTTATAAAAATAGCCCCGACGTGCTGTACATCCTGAGTAACTCAC
GGCACGCTTTGTGGCCTCCTCATAACATTTTATCTGGGCGACCATGCCAT
GTCTTCGTGTCGAGGCGGTGCTTTCTGCGTACGTTTTCCTACCTGTGAAC
CGCTTTGACGACCTGCACCTAACCTCTTTCTCACAGAACAGGCGGGCAAT
CGTCTTCACACCAGCGTAGCATGTCCCTCTTTGTCATCGTAGGCAAAAAT
GAACCCATTTTCGAGGCAGATTTCTCGACATCTTCCACCTCGACGGGAGC
CAGCCCCAATAAAGTACGTCTGGGCACATGCAAGCCTGATATCGAAGCCA
TCATGTTGTTTCACATTGCATAACGTACAATTTCCTCTTGCTCCGTGGAC
GTGGCGTCATGCATGCCAGGATTCTGAGGACGACTGGGAGGAGTCATCTC
AGTCATGCCATGATCATCGTGGGTGTAATAAGCGGCCTTTTTCAATCGCT
AACCTAACCTTTCTTGCCACCCTCCCTCCCTCCCTCCCTCCCTCCTTCCC
TCCCCCCTGTTCTCAGGTCTCGGCCGCGGAGGAAGGCAACGCGCAGTTGA
ACCAATTCATCCTGCATTCGTCCTTGGACATGCTGGAAAAAGCCATGTGG
TCGTCTCCGTACATGAATCTGCGGGCCATCGACCGTTTCAACGGGCACAT
CGTCCACGCCTTCCTCACAGCGGGGGGCACGGCCTTCCTCCTCCTCCACG
ACGGAAACCGGGGGGAGGAGTCTCTCGTCGGCTTTTTCAAGGACGTGTAC
GAATTGTACGTCAAATTGTTGATGAACCCGTTCTGTGAGATGGACAGGCC
CATTGTTAGCAGCAGCTTTGAAGCGCGGGTACGGGTCTTGGAAAAACGTT
GGTTGAGATGATGAGATGGGAAGGGAGGCCGGGCACCCCGTCGCCGGGAA
TGTAGAAAGCGGGAGGGAGGAAGACGAGATGGGGGAATGTAAAAAGGAAA
AAGCCATGACATCCACCTGTACGCACGCATCCGACGTGGCTCTAAAAAGG
CATAAGCCAAGAGCGTGCGCCAAAGGATTGGATCGGTCACTCCTGTATGA
TTCCATACAATTACATCTCATGCCTGTGCCTCGGCGCCGTCATCCCCTGC
CCGCCCTCCGTCCCTCCTACCCCTCGCCCTGCTCAAATCACCAAGCTGTC
CGCACGCCCCCATTTCCTCCGCACCCTTCGACTCGCGGACGGTGGAGAGA
CGCCCGTGGTCCTTCAAAATGCGTCGAAAGGATCGGATCGCGTCCGGGGA
GGCAGGCAGAAAGTTTGCGCCTGCCGAGGGAGGGAGGGAGGGAGGAAGGG
GGGGTGAGAACATTGCTTGGAGGGGTCAAAGCAATGATGTCCCTCCTCAG
CCCTCTTCCCCCCCTCCTTGCCCCGAACCTTCATGCGAGTTGAAGTGGAT
GAGGTTGATCACGCAGTCCATCCCTTCCGTCATCGCTGCCAGCCTCTCGG
CGTCTTTCTCGTCATCATTCACCCCCGCCAAGAGCAGGTACTCCAGAGCC
ACAGGCCCCCGCCGCCGCCGCTCCCTCCGTCCGGTGCTCGTCGCAGCTCG
AGGGAGGGGGAAGTGCCGGCGCAGGGAGGGAAGGAGGGAGCTGGAGAGGG
GGTACCGGCGATTGATCGGCATGAAGGAGCTTCGGACCTGGGGAGGGAGG
GAGGA back to topCoding sequence (CDS) from alignment at CM002461.1:1115645..1117749- >rna3747 ID=rna3747|Name=rna3747|organism=Nannochloropsis gaditana|type=CDS|length=528bp|location=Sequence derived from alignment at CM002461.1:1115645..1117749- (Nannochloropsis gaditana)
ATGGGAAGGGAGGCCGGGCACCCCGTCGCCGGGAATGTAGAAAGCGGGAG
GGAGGAAGACGAGATGGGGGAATGTAAAAAGGAAAAAGCCATGACATCCA
CCTGTACGCACGCATCCGACGTGGCTCTAAAAAGGCATAAGCCAAGAGCG
TGCGCCAAAGGATTGGATCGGTCACTCCTGTATGATTCCATACAATTACA
TCTCATGCCTGTGCCTCGGCGCCGTCATCCCCTGCCCGCCCTCCGTCCCT
CCTACCCCTCGCCCTGCTCAAATCACCAAGCTGTCCGCACGCCCCCATTT
CCTCCGCACCCTTCGACTCGCGGACGGTGGAGAGACGCCCGTGGTCCTTC
AAAATGCGTCGAAAGGATCGGATCGCGTCCGGGGAGGCAGGCAGAAAGTT
TGCGCCTGCCGAGGGAGGGAGGGAGGGAGGAAGGGGGGGTGAGAACATTG
CTTGGAGGGGTCAAAGCAATGATGTCCCTCCTCAGCCCTCTTCCCCCCCT
CCTTGCCCCGAACCTTCATGCGAGTTGA back to top
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