rna3735, rna3735 (mRNA) Nannochloropsis gaditana

Overview
Namerna3735
Unique Namerna3735
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1338
Alignment locationCM002461.1:1094659..1095439 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102328g1.3395.mrna
Orig protein idgnl|cribi|Naga_102328g1.3395
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1094659..1095439 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102328g1gene3599Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3735rna3735-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26947.1cds3726Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3735 ID=rna3735|Name=rna3735|organism=Nannochloropsis gaditana|type=mRNA|length=1338bp
ACCGTCCGCACCTCGATTTTCCCCCACGATCCCGCCCCGCTCGATCTGCC
ACCCAGGCTTCCACATCCCGCCTGTTTCTTCTCCCTCCGTCCCGTCCTCC
CTCCCTCCCCCCTTCCCCCTCCCACACCTGCCTCTGGACCGCCACAGGTG
CCCCCGCCGCCGCTGTCCGAGCGAGAACTGCCGTTGTCTCCCCTACCGCC
TCTCTTGGCGCCTGCTCACGATCCCTGGTCGGCAGGGCTTTCGCTATCAC
CCTGCTTGGGACCAGGACCGAACGTCGACAGGACAGAGAGCCTGTCTGAC
TTGGCCCCCCACCGCCTGGACGACCTGCCTCCCTTCCTACCCAGCACCGA
TTCTGTTCCCCCCCGGGGCCCCCTCCTCTTCCCAGCAGACATAAGTGCCG
AGCTTCCCTCGGTCCAAGCGTTGGACGTTGACGTGGGAGGGATCGGTGGG
CTGGGTGCCATTGGCTCTGACGGACACGTCCTGGACGCTGGCGCCTACCC
AGCGGCGGGCCCTGCGGGGGCAGGTCCGGGGGAAGGGAGGCTGCCTGCGG
CGAGTATCTTGGCGGAGGATGGCCGTGTGATGGAGTTGTTGGATTTGGCG
GACGATTTCCTCCCTTTGTTCGGTCAAGACTGAAGGGATCGACAGGCGCG
GGAGGCGGGCCAGGGGGGAGAGGCTGGAGCCCGGGGTGGCTGGTTGAAGA
AGGAGGAGGTCGAGGGGAAGAATAGCAGAGGCTAGGACGGGCATGCTTGT
GAGATGTTTGTATGTGTGGATATACAATTAGAGATTAGGAAAGAGAGAGA
AAGAGATGGAGACAGCGGTGATCCATTCGGGTGGCACGTGAAAGGGGAAG
CCGGTGATGTGGAGAAGGCTCGAAAATGTAAGGAGACCCCTCGAGAGGGA
GGCGAGGCGAGCCGCGAGGGCAACGGGTGTCTGACTGAAATGTATGACTG
AAATTCATTACTGAAATTCATCGTTCTTCTGGGATGGTACGATTTGCAAA
TTTGAAGAGACTTCAGAGGAACACTAATCCGAGTGACCGGGTAATTGCTT
GCGGTAAAGGGCAAAGAGGGTTTCCTCCTCTTTTTGTGCACACAAGCGGG
AGGCAGCGTGGACGGTTATGACAGAAGTTGGATTCTTTTTTTGGGCGCAT
GGCATGCGTGAATCACAAGCAGACTGGGCGAGAGCCCCGGCAAGTAGGAG
GCTCACGGGGTCCAGGAGCGTTGAGGTCCATAGAGAGGGAGGTCATCCCT
TGATATGGCAAGAGCCTCACCACAGGATGTGATGGACGCTGGATGCTACG
TAATAAAGCAAATTCCACATTTTTTGCGCATTGGCTTT
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protein sequence of rna3735

>rna3735-protein ID=rna3735-protein|Name=rna3735|organism=Nannochloropsis gaditana|type=polypeptide|length=235bp
MHTVVRRFQKPREDQTTPPPSLPPSLPPSLPPSLPPGPTAASSASDSSAS
GSDPGEGWRKGSSAPPPAPRIHNDSSTGSLAAGSSEGRSEGEGEGGGEEG
SLGTGGKRTVLPLLLTRQHYPGLESVLQKEIEMRRERTRKKEEEQRLVER
GRVDAAEAQGEGGREDRPDGERTVLLGELSLPSLPGMACLPFPSEREARQ
GNLVPCDLGTTLAERQGGGKTVLPSIFPPARTECT
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mRNA from alignment at CM002461.1:1094659..1095439-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3735 ID=rna3735|Name=rna3735|organism=Nannochloropsis gaditana|type=mRNA|length=781bp|location=Sequence derived from alignment at CM002461.1:1094659..1095439- (Nannochloropsis gaditana)
ATGCACACGGTCGTCCGTCGCTTTCAAAAACCACGCGAGGACCAGACAAC
TCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCCCCGGGGCCCACCGCCGCCTCCTCCGCCTCGGATTCCTCGGCATCT
GGCAGCGACCCCGGGGAGGGATGGAGGAAAGGCTCTTCTGCCCCACCGCC
CGCACCACGTATACACAACGACAGCAGCACCGGCAGCTTGGCCGCTGGGA
GCAGCGAAGGCCGGAGCGAGGGCGAGGGGGAGGGCGGGGGGGAGGAAGGG
AGCCTAGGGACGGGAGGAAAGCGAACGGTCTTGCCCCTCCTGCTCACCCG
CCAGCACTATCCAGGCTTGGAGAGTGTCTTGCAAAAAGAAATTGAGATGC
GCCGCGAGAGGACAAGGAAGAAAGAAGAAGAGCAACGGCTCGTGGAAAGG
GGAAGAGTGGACGCGGCGGAGGCCCAGGGGGAGGGCGGGAGGGAGGACAG
GCCGGACGGAGAGCGGACGGTGCTGTTGGGGGAACTTTCTCTTCCTTCCT
TGCCTGGTATGGCCTGTCTACCTTTTCCATCCGAGCGGGAAGCGCGGCAG
GGTAACTTAGTGCCGTGCGACTTGGGCACCACTTTGGCAGAGAGGCAGGG
GGGGGGGAAGACGGTGCTCCCTTCTATTTTCCCTCCGGCGCGGACGGAGT
GGTTGGACGCGATGACGGAATGGGGAGCCTCGGTGTTTGCCTCGGGCGTG
CCACTGGAGGTGGTGACGCATCAGCACGTAG
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Coding sequence (CDS) from alignment at CM002461.1:1094659..1095439-

>rna3735 ID=rna3735|Name=rna3735|organism=Nannochloropsis gaditana|type=CDS|length=1416bp|location=Sequence derived from alignment at CM002461.1:1094659..1095439- (Nannochloropsis gaditana)
CACGTAGATGCACACGGTCGTCCGTCGCTTTCAAAAACCACGCGAGGACC
AGACAACTCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCCCCGGGGCCCACCGCCGCCTCCTCCGCCTCGGATTCCTC
GGCATCTGGCAGCGACCCCGGGGAGGGATGGAGGAAAGGCTCTTCTGCCC
CACCGCCCGCACCACGTATACACAACGACAGCAGCACCGGCAGCTTGGCC
GCTGGGAGCAGCGAAGGCCGGAGCGAGGGCGAGGGGGAGGGCGGGGGGGA
GGAAGGGAGCCTAGGGACGGGAGGAAAGCGAACGGTCTTGCCCCTCCTGC
TCACCCGCCAGCACTATCCAGGCTTGGAGAGTGTCTTGCAAAAAGAAATT
GAGATGCGCCGCGAGAGGACAAGGAAGAAAGAAGAAGAGCAACGGCTCGT
GGAAAGGGGAAGAGTGGACGCGGCGGAGGCCCAGGGGGAGGGCGGGAGGG
AGGACAGGCCGGACGGAGAGCGGACGGTGCTGTTGGGGGAACTTTCTCTT
CCTTCCTTGCCTGGTATGGCCTGTCTACCTTTTCCATCCGAGCGGGAAGC
GCGGCAGGGTAACTTAGTGCCGTGCGACTTGGGCACCACTTTGGCAGAGA
GGCAGGGGGGGGGGAAGACGGTGCTCCCTTCTATTTTCCCTCCGGCGCGG
ACGGAGTGCACGTAGATGCACACGGTCGTCCGTCGCTTTCAAAAACCACG
CGAGGACCAGACAACTCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCCCCGGGGCCCACCGCCGCCTCCTCCGCCTCG
GATTCCTCGGCATCTGGCAGCGACCCCGGGGAGGGATGGAGGAAAGGCTC
TTCTGCCCCACCGCCCGCACCACGTATACACAACGACAGCAGCACCGGCA
GCTTGGCCGCTGGGAGCAGCGAAGGCCGGAGCGAGGGCGAGGGGGAGGGC
GGGGGGGAGGAAGGGAGCCTAGGGACGGGAGGAAAGCGAACGGTCTTGCC
CCTCCTGCTCACCCGCCAGCACTATCCAGGCTTGGAGAGTGTCTTGCAAA
AAGAAATTGAGATGCGCCGCGAGAGGACAAGGAAGAAAGAAGAAGAGCAA
CGGCTCGTGGAAAGGGGAAGAGTGGACGCGGCGGAGGCCCAGGGGGAGGG
CGGGAGGGAGGACAGGCCGGACGGAGAGCGGACGGTGCTGTTGGGGGAAC
TTTCTCTTCCTTCCTTGCCTGGTATGGCCTGTCTACCTTTTCCATCCGAG
CGGGAAGCGCGGCAGGGTAACTTAGTGCCGTGCGACTTGGGCACCACTTT
GGCAGAGAGGCAGGGGGGGGGGAAGACGGTGCTCCCTTCTATTTTCCCTC
CGGCGCGGACGGAGTG
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Synonyms
Publications