rna3734, rna3734 (mRNA) Nannochloropsis gaditana

Overview
Namerna3734
Unique Namerna3734
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1385
Alignment locationCM002461.1:1093171..1094508 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100929g3.2081.mrna
Orig protein idgnl|cribi|Naga_100929g3.2081
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1093171..1094508 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100929g3gene3598Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26949.1cds3725Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3734rna3734-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3734 ID=rna3734|Name=rna3734|organism=Nannochloropsis gaditana|type=mRNA|length=1385bp
GGGAGAGTGTATGCGATTGATCGCACCATGCCATCCTCTCCCCCTCTTCC
AAGGCGTCTTCCCTCTCTTTTGCAACCGGCACGCCCCCACTCATCCTTTT
CCCCTTTCTCCTCTGTGTAGGGCGAGCAAGACGTGCACTCCCCGGCGGAC
GACTATCGGTGCCTCTTCCCTTCCTTGATCCGCTCCTGGCGGGGGCAGTT
CCTTCCAGCGAACGCCTTGGGCCCCATGGCCTTTGGATTCCTACAGCTTC
ATGGTTACGAAGACCCGTACATGGACATCACGGCCCAGGGGGTGGAGGTT
GGCAGCATCCGCCTGGCCCAATACAGCGGTTTGACCGCCCCGCATACCTT
CATGGCAGCAGCCTACGACCTGAACGACGACGCGTCCCCCTTTGGCGCGG
TACATTTTCGAAACAAGCAGGAAGCGGGGGCCCGTCTGGCCCGGGCGGCG
CTGGCGAACGGGTACGGAAAGGGGGGTTCCATGTTGGGACCCGTGGCCAG
AGACATTGTGGTGGTAGTGGGTAAAGGAGACGGTGGACGACGGCGCGCAC
GCCCCGTCTCCATGGCATCCGGGCACACGAATCTTGAGGCGGGAAAGCGA
GGGAGTGGCTCGCTTGCGGCAGGCAATGTGGGTGCCGACGGGAAGGGAGC
CAGTCTTGGTGTTGAGGGAGAGGACGACCTAGGTCGAGCGAAAGCTCAAA
CCGAGGCGCCGATAGCGCCAGCCAATGCCACGGTGCCGTTTTCCATTCTC
ATATCCTATATTGGGGTAGGGAGTCAGGGCTTGGTTGACAGTGGGATAAA
TTTGTTTGAGCTGGCGACGGAAGTTGACGCGACAGACACCGCAGGTGGAC
AGGTTGTTCCCTCCAGTCACCTGAGCGTGCTGGGGAAGAACAACGAGCAG
TTGCTGGTTGAATTTGAGCTGCCTGTAGACTCTCCTTTCGTGGAAGAGGG
GGTGTTGCGTATTTTGAGATATGCCTACCGCAACCGTCCTTGCCCGCCCA
CGGAGGTTGAAAATCCTCACGTGGGAACATGGTGTGGGTTGTACAGCTTC
CCGGAAGGGGTTCCGGCCCTTCCCTTTGTGCAAGATGTATGAATATTGAA
TGATACTGTAGCTGAAGGGTGATGGCCACACATACATCTCGATTGCGTTT
TGTATGTTTCATATACTTCAGTAACAATTAATTTGTTTCCTTGTCTGTCG
CGCTTGCCATGAGGATTTCTTTTCTACGGTGGCTTTATTACGAATGATTT
GAGCCTTTAAACCCGCCAAAAAGAGAAATTTTTCATTTGCATCGACCATC
GGCAGGTCTGAAAATCATGGATGGAGTATACACGTGCAATGAAAGTTTGC
AGTGGTCTCCCACAACTCGTACTACTGTGTACCGC
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protein sequence of rna3734

>rna3734-protein ID=rna3734-protein|Name=rna3734|organism=Nannochloropsis gaditana|type=polypeptide|length=210bp
TVRTSIFPHDPAPLDLPPRLPHPACFFSLRPVLPPSPLPPPTPASGPPQV
PPPPLSERELPLSPLPPLLAPAHDPWSAGLSLSPCLGPGPNVDRTESLSD
LAPHRLDDLPPFLPSTDSVPPRGPLLFPADISAELPSVQALDVDVGGIGG
LGAIGSDGHVLDAGAYPAAGPAGAGPGEGRLPAASILAEDGRVMELLDLA
DDFLPLFGQD
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mRNA from alignment at CM002461.1:1093171..1094508-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3734 ID=rna3734|Name=rna3734|organism=Nannochloropsis gaditana|type=mRNA|length=1338bp|location=Sequence derived from alignment at CM002461.1:1093171..1094508- (Nannochloropsis gaditana)
ACCGTCCGCACCTCGATTTTCCCCCACGATCCCGCCCCGCTCGATCTGCC
ACCCAGGCTTCCACATCCCGCCTGTTTCTTCTCCCTCCGTCCCGTCCTCC
CTCCCTCCCCCCTTCCCCCTCCCACACCTGCCTCTGGACCGCCACAGGTG
CCCCCGCCGCCGCTGTCCGAGCGAGAACTGCCGTTGTCTCCCCTACCGCC
TCTCTTGGCGCCTGCTCACGATCCCTGGTCGGCAGGGCTTTCGCTATCAC
CCTGCTTGGGACCAGGACCGAACGTCGACAGGACAGAGAGCCTGTCTGAC
TTGGCCCCCCACCGCCTGGACGACCTGCCTCCCTTCCTACCCAGCACCGA
TTCTGTTCCCCCCCGGGGCCCCCTCCTCTTCCCAGCAGACATAAGTGCCG
AGCTTCCCTCGGTCCAAGCGTTGGACGTTGACGTGGGAGGGATCGGTGGG
CTGGGTGCCATTGGCTCTGACGGACACGTCCTGGACGCTGGCGCCTACCC
AGCGGCGGGCCCTGCGGGGGCAGGTCCGGGGGAAGGGAGGCTGCCTGCGG
CGAGTATCTTGGCGGAGGATGGCCGTGTGATGGAGTTGTTGGATTTGGCG
GACGATTTCCTCCCTTTGTTCGGTCAAGACTGAAGGGATCGACAGGCGCG
GGAGGCGGGCCAGGGGGGAGAGGCTGGAGCCCGGGGTGGCTGGTTGAAGA
AGGAGGAGGTCGAGGGGAAGAATAGCAGAGGCTAGGACGGGCATGCTTGT
GAGATGTTTGTATGTGTGGATATACAATTAGAGATTAGGAAAGAGAGAGA
AAGAGATGGAGACAGCGGTGATCCATTCGGGTGGCACGTGAAAGGGGAAG
CCGGTGATGTGGAGAAGGCTCGAAAATGTAAGGAGACCCCTCGAGAGGGA
GGCGAGGCGAGCCGCGAGGGCAACGGGTGTCTGACTGAAATGTATGACTG
AAATTCATTACTGAAATTCATCGTTCTTCTGGGATGGTACGATTTGCAAA
TTTGAAGAGACTTCAGAGGAACACTAATCCGAGTGACCGGGTAATTGCTT
GCGGTAAAGGGCAAAGAGGGTTTCCTCCTCTTTTTGTGCACACAAGCGGG
AGGCAGCGTGGACGGTTATGACAGAAGTTGGATTCTTTTTTTGGGCGCAT
GGCATGCGTGAATCACAAGCAGACTGGGCGAGAGCCCCGGCAAGTAGGAG
GCTCACGGGGTCCAGGAGCGTTGAGGTCCATAGAGAGGGAGGTCATCCCT
TGATATGGCAAGAGCCTCACCACAGGATGTGATGGACGCTGGATGCTACG
TAATAAAGCAAATTCCACATTTTTTGCGCATTGGCTTT
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Coding sequence (CDS) from alignment at CM002461.1:1093171..1094508-

>rna3734 ID=rna3734|Name=rna3734|organism=Nannochloropsis gaditana|type=CDS|length=633bp|location=Sequence derived from alignment at CM002461.1:1093171..1094508- (Nannochloropsis gaditana)
ACCGTCCGCACCTCGATTTTCCCCCACGATCCCGCCCCGCTCGATCTGCC
ACCCAGGCTTCCACATCCCGCCTGTTTCTTCTCCCTCCGTCCCGTCCTCC
CTCCCTCCCCCCTTCCCCCTCCCACACCTGCCTCTGGACCGCCACAGGTG
CCCCCGCCGCCGCTGTCCGAGCGAGAACTGCCGTTGTCTCCCCTACCGCC
TCTCTTGGCGCCTGCTCACGATCCCTGGTCGGCAGGGCTTTCGCTATCAC
CCTGCTTGGGACCAGGACCGAACGTCGACAGGACAGAGAGCCTGTCTGAC
TTGGCCCCCCACCGCCTGGACGACCTGCCTCCCTTCCTACCCAGCACCGA
TTCTGTTCCCCCCCGGGGCCCCCTCCTCTTCCCAGCAGACATAAGTGCCG
AGCTTCCCTCGGTCCAAGCGTTGGACGTTGACGTGGGAGGGATCGGTGGG
CTGGGTGCCATTGGCTCTGACGGACACGTCCTGGACGCTGGCGCCTACCC
AGCGGCGGGCCCTGCGGGGGCAGGTCCGGGGGAAGGGAGGCTGCCTGCGG
CGAGTATCTTGGCGGAGGATGGCCGTGTGATGGAGTTGTTGGATTTGGCG
GACGATTTCCTCCCTTTGTTCGGTCAAGACTGA
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Synonyms
Publications