rna3730, rna3730 (mRNA) Nannochloropsis gaditana

Overview
Namerna3730
Unique Namerna3730
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1290
Alignment locationCM002461.1:1078100..1078741 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100304g2.3101.mrna
Orig protein idgnl|cribi|Naga_100304g2.3101
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1078100..1078741 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100304g2gene3594Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3730rna3730-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26955.1cds3721Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3730 ID=rna3730|Name=rna3730|organism=Nannochloropsis gaditana|type=mRNA|length=1290bp
TCGCGACATAATTACGGGCCCATTACAAGCGCGCATGGTCTGGCGTACAT
ATCAACCATATATAGGCATAAACTTGAAATCGAGGTCTCCTACCTAGATC
TCGTGCGTATCCATTGATTTGCTTCTTATCGTTAAACCTCCTAAGGAGCC
CGGTACTACCCTACCCCCGTAAATGCATGCTTCATCCCACTTTCTTCGGT
TTGAGAAAACAGTGATACTTCTCCTCATCGATGGACATTGCTAGCATATC
TAGTCCTTCAGGATCTTCGAAAGCTCTCTCCGCGCCGGCCGATCAGAATA
GTATGGAAATCAAGAAACAGAAGGAAGATAAGACCTGGGAGCACGCATGG
GAGATGAAGCGCGTGCTGAGAATGACGGAGGAGCTTATAGAGGAGGAAGA
GATAAAAAGTGCTTACGAGGCGCATAAACAGCTTGAGGTGACCAAGAAAG
AAGCAAATCAACGCAAAAAACTCGATAAAGCAGAGGTATTCCAAGCGAAA
ATTGAAGCACTACGCTGCGTCAAAAAAGAGAAAGAAAGGGAGGTAAGCGT
CCAAATCTGTCCAACTCTTTTGAAACTCTGACAAAGCGTGACTACATCTA
GCCTACTGAAAGGCAGCCACAAGTACTCAAAACCCCGGCTTTCTCCAACG
TGTACCTTGGATCCCCGCAGGAAAAATCGATGCGCGTCCTCCTCGGCCGG
GACTATGCCCGTTCCATGGCCCGCAAGAAGAAAGAGGAATCCGAACAGCG
AGCGGCGCGCCAGCTCGACCGAGACCAACGGCGCGAGGCCCTGCTCAAAG
AGCTACAACTGCTGCGAGAGGCGTCTAGGCGCGAAAAAGTCGCCAAAGAG
GCTGAGAAAGATTCGTGGCAGCTGCGTCAGAAGGCTGAAAATGCCATCGA
AGAAAAAGAGAGGACGGAGATGGTGCGCAAAGTACGAGCGTCCATAGAAG
CACAGATAGAAAAACGACGCGCCTCGCTCTACAACGCGTCTGCCGCGTTG
AGCCGGGAAAAATTGTACGAAAAGAGTCCCTCCACAACAACTAAATAAGA
AGGGCAAAAGGTTTCGGCAGAGTAAGCAATCAGGGATGTAAAATTTTACA
CCGAACTTTTACCTACCGGTGAGAGCGACGATACGCTTAATGTGACAGGA
AATGGCAGCAGCCCAACGGGCAATTTATACTGAAGAGAAAGAGGAACAGC
AGCCCCCAGGGGTGGGGGGAAGAATGTAAATCGTGTCTATAGGCGTGGTA
GAAGATTTGTTTTGTCCGTTGCAAATTTAGCTTTTCAACC
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protein sequence of rna3730

>rna3730-protein ID=rna3730-protein|Name=rna3730|organism=Nannochloropsis gaditana|type=polypeptide|length=180bp
MVCREPGGIGVLGALCPEAGNEGKQAYLLYLKARSPATAALSKGFALSFQ
RRNYWTLGIGEKRISLAQGRLASPTDGPLGASFPCSGTGASGGRSREIRM
RGSECMLGLIKCDSLGGYNKGNIPYIGATVVVHTDGISASRSEIVPEATE
TKYHLFQNFGYEGRKNVKEAPVRGAIHGKS
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mRNA from alignment at CM002461.1:1078100..1078741-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3730 ID=rna3730|Name=rna3730|organism=Nannochloropsis gaditana|type=mRNA|length=642bp|location=Sequence derived from alignment at CM002461.1:1078100..1078741- (Nannochloropsis gaditana)
ATGGTGTGTAGAGAACCGGGGGGCATAGGGGTGCTCGGAGCGCTCTGCCC
GGAGGCCGGCAACGAGGGGAAGCAGGCTTATTTATTATATTTAAAAGCAA
GATCCCCCGCCACCGCTGCACTGTCCAAGGGCTTCGCGCTCTCGTTTCAG
CGGCGCAATTACTGGACTCTGGGCATTGGGGAGAAACGCATCTCCCTGGC
ACAAGGGCGTCTGGCGTCGCCCACCGACGGGCCGTGGGATGCGCATTGAA
GGTCCTGGGATGCGGCCGTCGACGTTGGGGAGCTGGTCAAGAGGGAAGAA
GGAGGCTGCGGTGGCTGGTGAGGGCATGCAAGGCTCGGAGCCTCTTTCCC
GTGCTCGGGGACCGGGGCGTCAGGAGGCAGAAGCCGAGAAATCAGAATGA
GAGGCAGCGAGTGCATGCTCGGATTGATCAAATGTGACAGCCTAGGAGGG
TACAACAAAGGCAATATACCATATATCGGAGCTACTGTGGTAGTACACAC
CGACGGAATTAGTGCATCGCGTAGCGAAATCGTACCAGAAGCCACAGAAA
CAAAGTACCACCTGTTTCAGAACTTTGGGTACGAAGGGCGAAAGAATGTG
AAAGAAGCTCCGGTGAGAGGGGCAATACATGGCAAATCGTAG
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Coding sequence (CDS) from alignment at CM002461.1:1078100..1078741-

>rna3730 ID=rna3730|Name=rna3730|organism=Nannochloropsis gaditana|type=CDS|length=1086bp|location=Sequence derived from alignment at CM002461.1:1078100..1078741- (Nannochloropsis gaditana)
GCTCGGAGCCTCTTTCCCGTGCTCGGGGACCGGGGCGTCAGGAGGCAGAA
GCCGAGAAATCAGAATGAGAGGCAGCGAGTGCATGCTCGGATTGATCAAA
TGTGACAGCCTAGGAGGGTACAACAAAGGCAATATACCATATATCGGAGC
TACTGTGGTAGTACACACCGACGGAATTAGTGCATCGCGTAGCGAAATCG
TACCAGAAGCCACAGAAACAAAGTACCACCTGTTTCAGAACTTTGGGTAC
GAAGGGCGAAAGAATGTGAAAGAAGCTCCGGTGAGAGGGGCAATACATGG
CAAATCGTAGATGGTGTGTAGAGAACCGGGGGGCATAGGGGTGCTCGGAG
CGCTCTGCCCGGAGGCCGGCAACGAGGGGAAGCAGGCTTATTTATTATAT
TTAAAAGCAAGATCCCCCGCCACCGCTGCACTGTCCAAGGGCTTCGCGCT
CTCGTTTCAGCGGCGCAATTACTGGACTCTGGGCATTGGGGAGAAACGCA
TCTCCCTGGCACAAGGGCGTCTGGCGTCGCCCACCGACGGGCCGCTCGGA
GCCTCTTTCCCGTGCTCGGGGACCGGGGCGTCAGGAGGCAGAAGCCGAGA
AATCAGAATGAGAGGCAGCGAGTGCATGCTCGGATTGATCAAATGTGACA
GCCTAGGAGGGTACAACAAAGGCAATATACCATATATCGGAGCTACTGTG
GTAGTACACACCGACGGAATTAGTGCATCGCGTAGCGAAATCGTACCAGA
AGCCACAGAAACAAAGTACCACCTGTTTCAGAACTTTGGGTACGAAGGGC
GAAAGAATGTGAAAGAAGCTCCGGTGAGAGGGGCAATACATGGCAAATCG
TAGATGGTGTGTAGAGAACCGGGGGGCATAGGGGTGCTCGGAGCGCTCTG
CCCGGAGGCCGGCAACGAGGGGAAGCAGGCTTATTTATTATATTTAAAAG
CAAGATCCCCCGCCACCGCTGCACTGTCCAAGGGCTTCGCGCTCTCGTTT
CAGCGGCGCAATTACTGGACTCTGGGCATTGGGGAGAAACGCATCTCCCT
GGCACAAGGGCGTCTGGCGTCGCCCACCGACGGGCC
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Synonyms
Publications