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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102195g1.1262.mrna |
| Orig protein id | gnl|cribi|Naga_102195g1.1262 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:1031359..1032238 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3711 ID=rna3711|Name=rna3711|organism=Nannochloropsis gaditana|type=mRNA|length=2195bp
ACAGAAATTGCTGGAAGAGCCGGTTCTCCCACACGGAGACAAGTCTTTTT
GGCCTCTTCCCGAAGGAGAAGGGATAGAACGCCTGGGGGCCACGACAAGG
ACTGTAATTGCTAGCCTTGTAGCCTTTCATAGCAAGATTAAATGCTGTAA
TTTTGGTCATCAAGGATGGCATGTCACTTTCATGTGAATAGGCGGCATGA
ATTTTGGTGGTATTCCTGACTTGCAAGCTCCTTGTGTTTCGTGCGATTTT
CGCGCGCTTTTTCGCAAAGTCTAGGTCCTGACCCGCCCAAGATCAAGGAG
AATTGCACGATCTTCGGTCCAGGGCATAAAAAATGTAAAAGTGGGGTTCT
AATCAACTCAATCTTAAATATATTCGAAGGATGGAAAGCTCGGCCAAGAA
GCGCAGATGTTGCACGATACCCGCCTTGGCACGGGTTGGAAACCCTCCAC
AACCTCCCCTCACCGCTCCAACAAAAGCTGCAAACACCTCTGCGCCGGCG
CCATTCATGTTCAGCTTCTATAGAGAATCCGAGACCGGCCATCAAGATAG
CAAGGCTGCTCTCTTTCATACATCAGGCAGCGCGACTACAAATACCGCCG
GCCCTTCGTCTATTTTTGCCTCCCGGCTTGTACAGGAACGCAAAGCGAGT
CGTATCTCCACGCGACATGCCCTGTTGCGTCGCACGGCCAAGCAAGATCC
ACATACTGCTACGGATCCTCTGGCACTGCAATCGGAGGAACGGGTACGAG
TATTGTGGGAGGCAAGTAGCAATTCTAGCAACATCAAAGTCCGTCGCTTG
AACGGAGAGGTTGTGCGGGTGACATCAACCGACCTCAGCCCCCTCGCACG
CGCCCCAGACGCTCACTTTTCGAGGCCAACAGAGAACAGCGAAGAGGAAA
ATAGATTGGTGTGTCATATTGATCTTCTTTTCGACGACGTCACGCCTGGT
GCGCATGGGAACAAGCTTAGCCCTACCCCCCCCCAAATTGACACAAGCCT
GGCCAGCCTCATTTATCCTCTGACGCCCGAGTATTTCTTAAAGGAAATCT
GGAACCAAAAGGCTCTCGTCATTCAAGCTGGAGCTGGACGGCTTAAAAAA
ATGTGTCGGAACTTGGATCCCATCGGCGTCTTGCCCTCATCGAATCGTCG
GAAACGTCCCCGTCCTCTCTCGGCCCCTGCCTCCCGCCCTCCCTCCCTCC
CTTTCTCCACCTTGCATTTGCGGGTATCGCGGCTCTTGGAGAGTGCCCAT
CGAATCGTTGTCTGGATGAAAACCAGGACCCGGCACAAAGGAGGTCGTGG
CAATCGGACGAGTCGCAGGGCTGAGCAAGAGACCAGCCCCCACGGCCGCA
GGACCGCCAAGAAAGGGAAATGCGGCGATGAGGAGGGAGGGCGTGGTTGG
GATGACGTCATCCCAGGCCAGAGGCAGACGACCGAGCCTCGGCCTCCTTC
CCGCGAGAACCGCCGGACGCAAGCCTCCTGCCCCCCCCGGCCCTCCAGGG
GGAGGGGGGGGGGAGAAGGGCTCGCGCTCCCCTCCCTCCCTCTCCCCCCA
CGGACGACATTCAATACTTGGACCAGGTACCTCCCTCTGTCGCGGAGGCC
TGTCACAAGGCAGGGCACTCCCTCTACTTCAACCCGCCCTGGGGGACGCA
ACGGCCCTATCTTCGGACGCTCTCCCGAGACCTGGGGCTTCTCCCCGGCG
ACGGTCTGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGGGAGGGAGGG
GGGAAAGGGGGAGGGGACATGGAGGTCTTTGCCGTGCGCCCCCCCCCATC
GTACTCCCTTCCATTGGGACTCCCAGCACAATTTTACGGTCCAGATCCGA
GGCCGAAAACGGTGGACCGTTCAAAATTCCAATGTAAATGAGCCGTTGAG
CAACCACCATCCTTCCTCATCCAACCGTCGGGCGAGGGCGGGGGACACCG
CCCTTCACATGGCCTGTGGGATGCCTGTAGAAGCTCTTCAGGCACCCAGT
TTCCACGGCCCTCCCTCCTCCTCCTCCCCCGCATCGTTTGTCCTGCGGCC
GGGGGCGGTGCTCTACCTTCCCCCGGGCTGGTGGCATGCGGTGGAGGCTT
TGACGGATGAGGAGGGAGGGGAGGAGGAAGGGGAAGAGGTGGAGGTAGAG
GAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGTGCATTCTGTGA back to topprotein sequence of rna3711 >rna3711-protein ID=rna3711-protein|Name=rna3711|organism=Nannochloropsis gaditana|type=polypeptide|length=220bp
MEKEEEEEEEEEEEEEEEEEEEEEEGEEEEEKARQLGSSQARRGLSAAAG
WRGREVVEGEGGREGGKEGRVCLSPKALVFVRSPLAVLVMSMEGERAGEK
EGWVHLTLHRGFPLSASSAAPEASARILIDVPGRIEEAVKMLVSLPPAGG
SASPCSVQALLEAVMGKEGRVEKLGGERPGREGGRGGGREEVEVLVKKLV
GILTYHGYLRPWRHDPEEGG back to topmRNA from alignment at CM002461.1:1031359..1032238+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3711 ID=rna3711|Name=rna3711|organism=Nannochloropsis gaditana|type=mRNA|length=880bp|location=Sequence derived from alignment at CM002461.1:1031359..1032238+ (Nannochloropsis gaditana)
atggagaaggaggaggaggaggaggaggaggaggaggaggaggaggagga
ggaggaggaggaggaggaggaggaaggagaagaggaagaggagaaagcaa
gGCAGCTGGGGTCTTCGCAGGCGCGTCGAGGGCTATCAGCAGCCGCTgga
tggcgggggagggaggtagtggagggggaaggagggagggaaggggggaa
agaggggcgggtgTGCCTATCGCCGAAAGCCTTGGTCTTCGTGCGGAGCC
CGCTGGCCGTCTTGGTGATGAGtatggagggcgagagggcgggcgaaaag
gaaggtTGGGTGCACCTGACCTTGCACCGCGGCTTCCCGTTGAGCGCGTC
TTCGGCAGCGCCCGAGGCAAGCGCGAGGATCCTGATTGATGTGCCTGGAA
GGATAGAGGAGGCTGTGAAGATGCTGGTCTCTTTACCTCCAGCGGGCGGC
AGTGCGTCTCCCTGCAGCGTGCAGGCGTTGCTCGAGGCagtgatggggaa
ggaagggagggtggagaagctgggaggggaacggccggggagagagggcg
ggagaggcggcgggagagaggaggtggaggtgctggtAAAAAAGCTGGTT
GGCATTTTGACGTACCACGGCTATCTTCGCCCCTGGCGACACGACCCGGA
GGAAGGTGGATGAGCCGCGAGCgttgatggggagggaggatgggaggtac
gggggagaggtggggagATTGGGTGAAGGGTCCAGAGGGTGGGTGCTGAT
ggcgatggaagaggggTATGGAGgagtgatggggagggagtgtcTTCCAA
GCACGCGGACGCCCAGTGAGGAGGTTCAGTGATTTCTCTGGAAGAAAAGG
ATTGTGACCCTGCCTGGCGCGGTACAGAGG back to topCoding sequence (CDS) from alignment at CM002461.1:1031359..1032238+ >rna3711 ID=rna3711|Name=rna3711|organism=Nannochloropsis gaditana|type=CDS|length=663bp|location=Sequence derived from alignment at CM002461.1:1031359..1032238+ (Nannochloropsis gaditana)
atggagaaggaggaggaggaggaggaggaggaggaggaggaggaggagga
ggaggaggaggaggaggaggaggaaggagaagaggaagaggagaaagcaa
gGCAGCTGGGGTCTTCGCAGGCGCGTCGAGGGCTATCAGCAGCCGCTgga
tggcgggggagggaggtagtggagggggaaggagggagggaaggggggaa
agaggggcgggtgTGCCTATCGCCGAAAGCCTTGGTCTTCGTGCGGAGCC
CGCTGGCCGTCTTGGTGATGAGtatggagggcgagagggcgggcgaaaag
gaaggtTGGGTGCACCTGACCTTGCACCGCGGCTTCCCGTTGAGCGCGTC
TTCGGCAGCGCCCGAGGCAAGCGCGAGGATCCTGATTGATGTGCCTGGAA
GGATAGAGGAGGCTGTGAAGATGCTGGTCTCTTTACCTCCAGCGGGCGGC
AGTGCGTCTCCCTGCAGCGTGCAGGCGTTGCTCGAGGCagtgatggggaa
ggaagggagggtggagaagctgggaggggaacggccggggagagagggcg
ggagaggcggcgggagagaggaggtggaggtgctggtAAAAAAGCTGGTT
GGCATTTTGACGTACCACGGCTATCTTCGCCCCTGGCGACACGACCCGGA
GGAAGGTGGATGA back to top
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