rna3706, rna3706 (mRNA) Nannochloropsis gaditana

Overview
Namerna3706
Unique Namerna3706
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length390
Alignment locationCM002461.1:1020137..1021021 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100127g20.6217.mrna
Orig protein idgnl|cribi|Naga_100127g20.6217
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1020137..1021021 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100127g20gene3570Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26985.1cds3697Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3706rna3706-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3706 ID=rna3706|Name=rna3706|organism=Nannochloropsis gaditana|type=mRNA|length=390bp
ATGGAGAAGCAACCATTGCGGGAGAAGAGGGGGAGGACGGGACAGAGTTC
GAGATGGACGAGGAGATGGATTTGTCGGGAAACGAGGATGATTAAGGAAG
GAGGGGCATGCAAACATGTGCATAAAGAGTCGACTTCCGACAAAGCGATT
TCTTGCATCCTAAAGCCCGATCGTCATTTTGGTCCCTCCCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCTCCACCTGGGTCCAAAACTGCCACCCGCCGGA
TCCCGTATCGAGCACGCGCGTGCATGGCAGCCACCCCGGAGTGCTTGACA
AAACAAAAGCCCATGGACTACCCGTTCACAGGTAGGGCATGCATGTTGAT
CGCGGTTGTTGTCGCTTTGTTGTTGTTGGGGAGCTGGTGA
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protein sequence of rna3706

>rna3706-protein ID=rna3706-protein|Name=rna3706|organism=Nannochloropsis gaditana|type=polypeptide|length=294bp
MKRYCEAALRAGLLLSVLLALPHIGQVSKCESGCQVGLKNPNRDSLVVVA
AFFNVDLVQACLDSILRSSSGEPFPGDVVVVQQPSNHTEEMTQMIQERRK
MDNGRAAGILHHILTEDTPLVGQLWAMPFAHNVVETSKYAITCISDGDVI
LFGDWLAEIRSILDGYPSVYWASVSLHPFNNINPDYISNGAEHADFIEAP
TGMQMVCFRTPEFIRLYKSGTTIQDAHILEWIKSQGRRVVRTKRNHLVHM
MWSVYEEKIPVHKDYLEYKNERAKSGNLWKSFKKAHDANMTIVF
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mRNA from alignment at CM002461.1:1020137..1021021-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3706 ID=rna3706|Name=rna3706|organism=Nannochloropsis gaditana|type=mRNA|length=885bp|location=Sequence derived from alignment at CM002461.1:1020137..1021021- (Nannochloropsis gaditana)
ATGAAACGATATTGCGAAGCCGCCTTACGCGCTGGCTTGCTTCTATCCGT
TCTGTTAGCTCTGCCGCACATTGGACAAGTTTCAAAATGCGAGTCCGGGT
GTCAAGTTGGCTTAAAGAATCCAAATAGAGATTCTCTCGTGGTGGTGGCA
GCATTCTTTAATGTGGACCTTGTGCAGGCATGTCTTGATTCAATCCTGCG
ATCTTCTTCTGGTGAGCCCTTTCCGGGAGACGTTGTAGTGGTGCAGCAAC
CCTCCAACCACACTGAGGAAATGACCCAAATGATCCAGGAGCGAAGGAAA
ATGGACAATGGAAGAGCAGCCGGTATCCTTCATCACATTCTTACAGAGGA
TACCCCGCTCGTTGGTCAGTTGTGGGCCATGCCTTTTGCACATAATGTTG
TTGAAACTTCCAAGTACGCCATTACGTGCATATCCGATGGTGACGTCATA
TTGTTTGGGGATTGGTTGGCGGAGATTCGATCAATCTTGGATGGGTATCC
TAGTGTTTACTGGGCATCCGTTTCTCTTCACCCTTTCAACAACATTAACC
CAGACTACATTTCGAATGGCGCCGAGCATGCAGACTTTATTGAAGCTCCA
ACGGGGATGCAAATGGTGTGTTTTCGCACCCCGGAATTCATAAGACTCTA
CAAATCCGGGACGACCATACAAGATGCGCATATTCTTGAATGGATCAAGA
GCCAAGGAAGAAGGGTAGTAAGGACGAAAAGGAACCATTTAGTGCACATG
ATGTGGTCAGTGTACGAGGAAAAGATACCTGTGCACAAGGATTATCTCGA
GTACAAAAATGAACGGGCAAAGAGTGGAAATTTGTGGAAATCTTTCAAAA
AAGCTCACGATGCCAACATGACCATAGTTTTTTAG
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Coding sequence (CDS) from alignment at CM002461.1:1020137..1021021-

>rna3706 ID=rna3706|Name=rna3706|organism=Nannochloropsis gaditana|type=CDS|length=885bp|location=Sequence derived from alignment at CM002461.1:1020137..1021021- (Nannochloropsis gaditana)
ATGAAACGATATTGCGAAGCCGCCTTACGCGCTGGCTTGCTTCTATCCGT
TCTGTTAGCTCTGCCGCACATTGGACAAGTTTCAAAATGCGAGTCCGGGT
GTCAAGTTGGCTTAAAGAATCCAAATAGAGATTCTCTCGTGGTGGTGGCA
GCATTCTTTAATGTGGACCTTGTGCAGGCATGTCTTGATTCAATCCTGCG
ATCTTCTTCTGGTGAGCCCTTTCCGGGAGACGTTGTAGTGGTGCAGCAAC
CCTCCAACCACACTGAGGAAATGACCCAAATGATCCAGGAGCGAAGGAAA
ATGGACAATGGAAGAGCAGCCGGTATCCTTCATCACATTCTTACAGAGGA
TACCCCGCTCGTTGGTCAGTTGTGGGCCATGCCTTTTGCACATAATGTTG
TTGAAACTTCCAAGTACGCCATTACGTGCATATCCGATGGTGACGTCATA
TTGTTTGGGGATTGGTTGGCGGAGATTCGATCAATCTTGGATGGGTATCC
TAGTGTTTACTGGGCATCCGTTTCTCTTCACCCTTTCAACAACATTAACC
CAGACTACATTTCGAATGGCGCCGAGCATGCAGACTTTATTGAAGCTCCA
ACGGGGATGCAAATGGTGTGTTTTCGCACCCCGGAATTCATAAGACTCTA
CAAATCCGGGACGACCATACAAGATGCGCATATTCTTGAATGGATCAAGA
GCCAAGGAAGAAGGGTAGTAAGGACGAAAAGGAACCATTTAGTGCACATG
ATGTGGTCAGTGTACGAGGAAAAGATACCTGTGCACAAGGATTATCTCGA
GTACAAAAATGAACGGGCAAAGAGTGGAAATTTGTGGAAATCTTTCAAAA
AAGCTCACGATGCCAACATGACCATAGTTTTTTAG
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Synonyms
Publications