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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100003g121.1830.mrna |
| Orig protein id | gnl|cribi|Naga_100003g121.1830 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:901601..904042 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna370 ID=rna370|Name=rna370|organism=Nannochloropsis gaditana|type=mRNA|length=4272bp
ATCAGTGGGACATGGCTTCACTCACTACATCAGCCAGCGCTTTGTATGTA
CTCACCCCGAAATAGTTAGGTCGTCCTTTCACCTAGTGCGAATACGAGAT
AAAATGTGCATTGAAGCAACACGCGGCGTTGATCTTATATCGAGAACTCT
CCAATAATAACCAAATCTATCAACCGCAGGCCTGGGGCATAATTTGCCCA
CTTCTGACAACAAACGACATGAAACTTTGCCGCGCATTCGTGTTTCTTTT
CCTCTTCGCATCTTTCGCCGACGCCTTTTTCAAGCCGTCCGTTGGCAGAA
GGTCACTTGAGCTAGGGTCTAAGATAAACACAAAAGTGGAATTGGAGAAT
CCCAAGGTTGTGACCATGACTCAGCTTGCTCCTGGCGAGAAGAAGGTATT
TTGCCGCTGCTGGCAAAGCGGGACATTCCCATTGTGCGATGGCGCGCACA
TGAAGCATAATGAGGCCACTGGAGACAATGTTGGGCCTCTCATTATCTCA
AATCCGAAGCCAGCAACATAAGACATGATTTTTCATACCACCATACCGGG
ACCAGTTTTTGAAGAAATACCTCAGGTTAACCGAAATGATGCTGTGCATG
AAGATTTGATGATGGAGGGGAACATAGCATATGACTTATACTGGGAAAAC
GTAAGCTCTGTGCTTGATCTTTTTCGAATCCACTTTGCGTGACAGTTTGT
GGAAATTTAACCTCACCTTTCGCGAGGACCATTCCTCTTTTGCAAAAAAC
ATTTGAACAAGTGTGACATGCCTGATAACATGTGAATGACCAAAGTTTCT
TTCAATTCTGAAGTGGTATAAAATTACTAAACAAGCTAATACATCGGTTC
AATTGAATAAGGTTCATACTGGTTCGTTCTTGTTTGCTTAGTTTTTGACT
TTTGAGTCATATTCCACCAGTCACCTTGAGTACCACAGGCGTCGATCACG
CAGCGGTAAATATTATAGCTCACTTCAAAGGGTTGATGCATTCAATGCAC
CACCTCTGCAAACCATATTATAAGCTAGGGCTGCGGTCAAAAGTGCGTGG
CCGCTCGAACACCGCCAGCACTTGTGAAAGATATATCTTCAGTCTCGCAA
ATCGTGAACCTGTCTTCAAATGTGTGAGAGGCGGACACCCTGGCAGCGTT
CTAGAGCATTTTTTCCTGGAAGTGGCGGTGAGAGCACGGTGGTCACAGGC
AAACAAGCAGGGTTTTTCATGGAATAAGTAAGTGGCTTTTGTGGTGCTGA
GTTGCCAGGCGCGACCGAGGCAGGAGCTGAGGCGTGCAATCTCCGAGGGG
CAAGGGTGCCATTCGTCCCACAAAATGGTTGAAAATGCACGGGTGAGTGC
AGTGTATGCTGAGAGGTCAGCTCAGGGTGTACATGTCGCCTTGCGACGTC
AAAAGGCGGGGTCACTGAAGATTGTAGTGACTTCTGACAAATTCATTTCT
GTGGGTGTACTGGACGATAACTTCGCTTTGGTGGCGCGCTCTTTAAGGCG
CGGGAACTGCATCGGCTTTTTCCATTGAGCTATTAGACATTGAGTTGAGA
GCAAAACGCAAACTCGCTGACGACTCTTGAGCTCTTCGTGGTCCTCATGC
TGTACTCCTACACGGCTTCCGACTTCTGACCTCGGGACGATACACGGGAA
TCAAAAAGTACAAACTGCGGTTGCTGACAGCGTCTCGTTCTGATGTGAGG
GCATGACGAAAACAAGTTAAGGTTTAAAGGTGGGTTGCAGATCCAGGGCG
GAATCTAAGTGGCCGAGAGGAGAAGGAGCTTGATAAAATAAGTAATACAA
AATAACCCGGGTAAACATTGGCAGATTTCTCGGCCATCTTCTCAGTTGAT
GCGAAGCCTGGTAGACAGTGGTATGAGGAAAAAGCAAAAGGGGATAGCGA
CATGCGAATTCGCATGTTGGCATGTTACCTCATGTAGTCAGTGGGCTTCA
CTCAATTTCTCAAGCACGCGCTTTTCCAGGGCTGCGAGTGCAGATTGGTG
TCCATCCGATACGGGTAGGCTGGAGCTGACAAATATCTGCTGCCCTGTCC
GACTCGCAAGCCGGATGGCCATGGATTGAGCCTGATCATTGTCTGGCGCG
TCACGCAGCAGAGTAGATGTGACAGGGAGCGTATCGTACGGAGTCAGGGT
TGCTACACACAAAGAGCCCATAAGCGGGACGTTGCTCTTCTCTCCAAACC
AAATGAAACAACATCCGTTTCCTATCAACACATGCATAACAATGACTGAA
TCAAGATCTTCTCTTTCCTCTGTCTCCGTGTATAGTTGCATGCTTTGAAG
ATCCTGATGAGATGATGCTGTGAAACAATTGTGAAGGAAACCGCGTTAGA
CCCATTAACTGAATCCTCCCGAAAAAAAGCTTTTCTTCAGCCAAAGATCT
TGATAAGCATACGTAACTTGGTTTTGGCGAGAATCACACGAGGGATGCAC
GCTGAAGCGGGGCCGATAAGCCACACACAAATCAAACCAATACACTACAT
CGAAACATTCAAAGAAGTAAAGCGAAAAGTCACACACATTGGCTAGGAGT
AAGTATACGTGCTTGACAGGGGTTTCTGTGCCGGGTAAACATGAGATGAG
AAGCCGGGCGTGGACACGTACTACTCGTCGTTTATCCCTCAGGATGTGAA
GGCCGGGGGATTGCTTGTGGTGGGAGTGAGGACAAGTACGCGAATATAAC
ACTTGTGATGCCGTCGCCCAGAAAAGCAGTGATGTGATGAAAACTGCCGT
GGATTTTTTGGACGTGTGCAAAGGTGGAAAGCAATTTGGCAGTTTTTTCC
AGGATGACCTTCGATTCGAAAGAGGTAGTCATTGATGGCCGTGGACATTT
GCTTGGTCGGTTGTCTTCAATTGTGGCCAAGGAATTGCTTTCGGGTCAGA
AAGTTGTGGTAGTACGATGTGAGGAGCTCATGATCTCAGGGGGTCTTGTG
CGTAACCACACCCGATACATGCAATTTCTGCGCAAGCGCACGAATACAAA
TCCCAAGCGCGGCCCCTTCCACTATCGGGCTCCGTCTCGCATCCTTTGGC
GCACAATTCGCGGGATGTTGCCCCACAAGACTTTCCGTGGTGCCCAGGCT
CTCGCAAGACTCACGACTTTCGAGGGCATTCCCGCGCCTTATGATACGAA
AAAGCGAGTGGTGGTGCCACAAGCCCTCAAAATCCTTCGTCTGAAACCTG
GACGTCGCTTCTGCACACTGAGTCGGCTAGCGCACGAGGTAGGATGGGGT
CATCGTGACTTGGTTGCGCGCTTGGAGGCGAAGCGAAAGATCAAGGCTGA
GGCCTACTACCAGCAGAAGAAGGCTGGCACTGCTGCGAAAGCCCTTGCTG
AGCGCAAAGCTGCATCTGAGCTAAGCGCGGTGAATAATGTACTCGCTGGC
TTCGGTTATCATGTTGCCCCCACCCCCACCGCTGAGCGTATTTGAATTTT
AGAAACGATGCAGCAAGAGGGCCCCCCGCGAAGACAAGGGGAGTGAAAGA
GACCTCGTTAGCCTTTCGCAACTCATCAAAGTCTTCCAGTTTTACGTCCG
CGAGGTGTTCTCTATGTCAGGCATCACGCGCACACCTGATAGCCATTCTT
GAACTCTTGATTCTGGAGGCGTGCGTAGAGAGCGAAAGAAACCTCACAGA
TCGGCTTAACGAGGAAGGGGGACTCACTAAAAGCAACAAGGAGCACGTGG
TGACGAAGGATTGATAGCGGAAATTAATTGCGTCGGCGGTAACAATGCTA
ATGTTGTACCGTTATATGTCTCTATGTTTCTTTGTAGCTGTAGCTGGCTA
AGGATGGAGGAAATTCTGCTTAGAAAACATTGCCGACAAGTGCATGACAG
GGAAAAGCTTTGAACCTAACTTGTGTTGCTCAAGACATGTGTACGGAACG
GCCCCTTCTGAGCAAGTAGTCACTTTGAGTGTCCCGGTGCTTCACCTATT
TACATCGCGTGACCAGGTGGGCCGTGTTTGTTTTTTCCAGGAGCTTCGGG
CTTCTTGACTTTCAACGGCTTCACCCAGAGACGGATTTGCCATGCGGTGA
GATGTCATAGTTTCTTAAAGTATCTAACGAGTAGCTTGCTGTGTGCATAT
CGGAGCGTGGGAAGAATCTGACACCAGAAAGCGTGGAGTCATGCTGGAAG
TTATTACCTCTCGCTGAGGATCACGATTAAAATAGATAACAAGGTCCTAA
AAGAATATATCGGACACCGCAGGGCATCTCACTGCATGAAGTCAATCAAG
AGGTCGAACGGAAATATAAAGG back to topprotein sequence of rna370 >rna370-protein ID=rna370-protein|Name=rna370|organism=Nannochloropsis gaditana|type=polypeptide|length=399bp
MLSMFASTCSSPVAHPTHRSSVHLLLKLEHLFVQIEEHMNPSLIGRAFVI
VDTLEAKEQQESEDDSLTPLDYSAEAFNSGIRQNMTLGFIMRHFPDVALV
LAASWRSRSTSMLQEYQNVANKGPVQLLRRVVEGDGLTLVEDFGDGQFGE
YSVALPTSEHDCTRPSYLGEIEQAKELGGFLRAELKRLLGYRLTFGVGRT
LEEARRTAKGLLVFRGDGSMPSPPLRRHHENSFSGQDHDARPTSHGFFFE
DGDESGTFSQNYESSNRQEIRVDEEEIVLGASMNRAWSMRSSKCRTSPSD
VENAQQASHSGQAQKVSTNRVAPFCSQDTKLRVTDDKMKTQQCVEAFKCR
QSTAISGHRLRLHGHGTVVMSWILDTFTDASELASFLCSVEAPSIQFTS back to topmRNA from alignment at CM002455.1:901601..904042- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna370 ID=rna370|Name=rna370|organism=Nannochloropsis gaditana|type=mRNA|length=2442bp|location=Sequence derived from alignment at CM002455.1:901601..904042- (Nannochloropsis gaditana)
AACTTCCCGTCAATTGTGGCGAGGGCAAATTCTAATTCGAATCCTACTCG
GAAGGATATACCGTGTCGGGCCTGAGCTTTCTCCAAAATACGAGCGAGAC
AGCTGCGTGGGCAGAGAGACCATGGAGCATGGGAGATGGGATCGAGCATG
CGAACAGCCCCCATAAAATGCTTAGGTCGCCACGGGAGGCACATCAGGTT
GCTCATAGGATCCTCCAATTGTAAACATATGTCTCCTACAAAGGGAACAC
CACTATCAGGGCTTGGAGTATCTTCGTGTGCTGGAAGCGAAATACACGCA
CGGCTCAAAGACACAGACGGCATGGGCTTTGGGAGCCATTTTAAATAGCC
GTTCTCATCTATGTCAGCATATTGGTCGACCCTTTTTTTGTCGTACATTG
TATGTACGGGTACGACGCGGAGGCACCGCAGCCCTGCAAGAGAGCACCAA
AGAAAATTTATATGCTTTGTCTCTTGCGGCATATCCTTGTGACCTGCTCC
TGCAGAATAGCGGTACATTTTGCGATGAAGATGCACCGGAAAGGATGTCA
CATGACGTGCTGTAAGCGTAAATACAGAAGATGGGGAGCTCTATGCCTGA
TTTCCGAATTGCAGTGCGCACAGCGGGCTCCGGTCGAAGTGCTTGGGACT
TCGACGAGCAAGTCGAAGAATGGAAAATGGGGCGACAGCTGACGCCCCGA
CCGTGAGCTGCCATACTTCGTGTGTTGGAAAAGGGGAGCTTATGCAGCAT
TTCGAACGCTACATCCCGCATCATCTCTCCACAGGTGACTCAAGCGATTA
AGTAAATCACGGCTGGGCCAAGCTTTTGGAAGTTTCTCTCTTATCGATTG
TGTGTTTGCGACGAAACAAACTGAACGCGGCAACACGGCCCCGTCAGGGA
AAGAGGCAGGTAGCAAGGAGGCGATTCTCCATTGCGGCCAAGGGGCCAGA
TTAGAGAAATCGGAAACCTAAGGACTGCTACGTGGAAAAATGTTATCGAT
GTTCGCATCAACATGCTCTTCGCCTGTAGCACATCCTACCCATAGGTCAT
CTGTCCACCTTCTTCTCAAGCTCGAGCATCTTTTCGTTCAGATAGAGGAG
CACATGAATCCATCCCTTATTGGCCGTGCCTTTGTCATTGTAGACACTTT
GGAAGCAAAAGAACAGCAAGAATCTGAGGATGACTCACTGACACCTTTGG
ATTATAGTGCCGAAGCCTTCAACTCAGGAATTCGGCAGAATATGACCCTA
GGATTCATAATGCGACATTTTCCTGATGTTGCACTTGTCCTTGCTGCTTC
ATGGAGATCGCGGTCTACTTCTATGCTGCAAGAATATCAAAACGTTGCCA
ATAAAGGTCCCGTTCAGCTGCTGCGTCGCGTCGTGGAGGGTGACGGGTTG
ACGCTCGTTGAGGACTTTGGAGATGGGCAGTTCGGCGAGTACAGCGTCGC
GCTGCCGACTTCCGAACATGATTGCACGAGACCATCGTACCTGGGGGAAA
TAGAGCAAGCGAAAGAGTTGGGCGGATTTCTTCGAGCGGAGTTAAAACGC
TTGCTTGGCTACCGTCTTACTTTTGGTGTTGGTAGAACTTTAGAAGAAGC
TCGCCGGACAGCAAAGGGACTACTTGTTTTTCGCGGAGATGGGTCAATGC
CTAGCCCACCTCTGCGACGGCATCATGAAAACTCATTTTCGGGTCAAGAC
CATGATGCGAGACCCACCTCACACGGCTTCTTTTTTGAAGATGGGGATGA
ATCTGGAACTTTCTCACAAAACTACGAAAGCTCCAATCGACAAGAAATAC
GCGTGGACGAAGAAGAGATCGTGCTCGGCGCGTCAATGAATCGTGCATGG
AGTATGCGCTCTTCGAAATGCCGCACATCGCCGTCCGATGTCGAAAACGC
GCAGCAGGCTTCCCACTCTGGACAGGCTCAAAAGGTATCCACGAACAGAG
TTGCACCATTTTGTTCTCAGGATACAAAACTGCGAGTTACAGATGATAAA
ATGAAAACACAGCAATGCGTGGAAGCTTTTAAGTGTCGGCAATCCACAGC
GATTTCAGGACATCGATTAAGGTTACATGGACATGGAACGGTCGTCATGA
GCTGGATTTTAGACACATTCACCGATGCTTCTGAGTTGGCTTCCTTTCTC
TGCAGTGTGGAAGCTCCTTCAATTCAATTCACAAGTTAAAACTAGGCTGC
ACTGAAAGGAAAGCTTATGTATTCACAAATCACGGAAGTCGTGACCCACT
CAATTTGTCTCAATGTAAAATTGCTGCGCGGACACTCGTTTCATTTTGTA
CAGCAACTTGATTTTGTCAAGCTGGCATCAAAAACAATTGCCTTTCTATA
AATAGAGCTTGCAACATCATACTTTTTGACGTTGAATGGAGTCTTTATTT
TTGAAATCTTCTTCCTAAAACTACTTTCTAAACATTACTCAC back to topCoding sequence (CDS) from alignment at CM002455.1:901601..904042- >rna370 ID=rna370|Name=rna370|organism=Nannochloropsis gaditana|type=CDS|length=1200bp|location=Sequence derived from alignment at CM002455.1:901601..904042- (Nannochloropsis gaditana)
ATGTTATCGATGTTCGCATCAACATGCTCTTCGCCTGTAGCACATCCTAC
CCATAGGTCATCTGTCCACCTTCTTCTCAAGCTCGAGCATCTTTTCGTTC
AGATAGAGGAGCACATGAATCCATCCCTTATTGGCCGTGCCTTTGTCATT
GTAGACACTTTGGAAGCAAAAGAACAGCAAGAATCTGAGGATGACTCACT
GACACCTTTGGATTATAGTGCCGAAGCCTTCAACTCAGGAATTCGGCAGA
ATATGACCCTAGGATTCATAATGCGACATTTTCCTGATGTTGCACTTGTC
CTTGCTGCTTCATGGAGATCGCGGTCTACTTCTATGCTGCAAGAATATCA
AAACGTTGCCAATAAAGGTCCCGTTCAGCTGCTGCGTCGCGTCGTGGAGG
GTGACGGGTTGACGCTCGTTGAGGACTTTGGAGATGGGCAGTTCGGCGAG
TACAGCGTCGCGCTGCCGACTTCCGAACATGATTGCACGAGACCATCGTA
CCTGGGGGAAATAGAGCAAGCGAAAGAGTTGGGCGGATTTCTTCGAGCGG
AGTTAAAACGCTTGCTTGGCTACCGTCTTACTTTTGGTGTTGGTAGAACT
TTAGAAGAAGCTCGCCGGACAGCAAAGGGACTACTTGTTTTTCGCGGAGA
TGGGTCAATGCCTAGCCCACCTCTGCGACGGCATCATGAAAACTCATTTT
CGGGTCAAGACCATGATGCGAGACCCACCTCACACGGCTTCTTTTTTGAA
GATGGGGATGAATCTGGAACTTTCTCACAAAACTACGAAAGCTCCAATCG
ACAAGAAATACGCGTGGACGAAGAAGAGATCGTGCTCGGCGCGTCAATGA
ATCGTGCATGGAGTATGCGCTCTTCGAAATGCCGCACATCGCCGTCCGAT
GTCGAAAACGCGCAGCAGGCTTCCCACTCTGGACAGGCTCAAAAGGTATC
CACGAACAGAGTTGCACCATTTTGTTCTCAGGATACAAAACTGCGAGTTA
CAGATGATAAAATGAAAACACAGCAATGCGTGGAAGCTTTTAAGTGTCGG
CAATCCACAGCGATTTCAGGACATCGATTAAGGTTACATGGACATGGAAC
GGTCGTCATGAGCTGGATTTTAGACACATTCACCGATGCTTCTGAGTTGG
CTTCCTTTCTCTGCAGTGTGGAAGCTCCTTCAATTCAATTCACAAGTTAA back to top
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