rna3692, rna3692 (mRNA) Nannochloropsis gaditana

Overview
Namerna3692
Unique Namerna3692
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2826
Alignment locationCM002461.1:992232..992557 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100127g2.6218.mrna
Orig protein idgnl|cribi|Naga_100127g2.6218
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:992232..992557 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100127g2gene3556Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3692rna3692-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26986.1cds3683Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3692 ID=rna3692|Name=rna3692|organism=Nannochloropsis gaditana|type=mRNA|length=2826bp
ATGCTTCCCCCACACGTGAACCTGATCTTCCTCTCGGCCACGACCCCCAA
CACAAGCGAGTTCGGCGACTGGATCGGACGCATTCGACGGCGCCCTGTGC
ATGTCATCACTACCACCTACAGGCCCGTTCCCCTCTCGCACTCTCTCTTC
GCGGGGGGGGAACTTTTCCAAATCCTGGACCAGCGGACTCCCTTTGCGGC
CGCGATGCATCAAAAGGCGCAGGAGTCTTTCATGAAGAAGAGGGATTTGG
AGCTGATCAAGCAAGGAATCAAACCCCCATTGCGGGGAGGAGGAGGACGG
GGAGGAGGGGGAGGGGGAGGGGGAGGGAGGTGGGTGGATGGGGCTGGCAG
CAAGACTCAGTGGCAGTCATTGTTGAATCGTTTAAAAAAAGAAGCGCTTC
TGCCGTGCGTAGTCTTCAATTTCAGCAAGAAGAAATGCGAGGAATGCGCC
GACTATTTGGGGTCGGAGGACTTAAATGCCGCCAAGGAAAAGAGTCAGGT
GCATATCTTCACTTCCAGCGCAATCAAAAGGCTCCAGGCCAAAGACCAGG
ACCTTCCACAGGTCATCCGGGTACTTGACCTCTGTAAACGCGGCATTGGA
GTGCACCATGGCGGTCTCCTTCCCCTCCTTAAGGAAATCGTGGAGATCCT
CTTCTCGCGGGGCTTGATCAAAATCCTTTTCGCCACCGAGACATTCGCCA
TGGGGGTGAACATGCCCGCTCGGACGGTGGTTTTCAACGCCTTGCGGAAG
CACGACGGCCGAGACTTTAGGGACCTTTACCCTGGCGAGTATACGCAGAT
GGCGGGGCGGGCAGGTCGCCGAGGCTTGGACAAAGTGGGTACCGTCATTA
TCACCTGTTGGAAGGAAGTGCCCCCCCTTCCAACCCTCTCCCGGATGCTC
ACGGGGAGGGCGACCCTTCTGTCCAGTCAATTCCGCTTGACATATAATAT
GATTTTAAACCTCCTTCGCACGGAGGACATGTCGATGGAGGATATGATCA
AGCGCTCATTTTCCGAGTTTGCCACTCAAAGGGCTTTAGGCGCTCGTAAC
CTCCCATTGCAGCTTCAAAAGGCCGAGAAAATTCTCGGAAAAATCCGAAA
GGAAGGTTTAGCCCCCTGTTTGCGAGGGGATCCGCCTGCCATCGAAGATT
ATTATGCACAGAGCCGTCGGACAGCCCGACAAACCACGACAGTCGTCGCT
CAGGCATTGAATCTGGCCAAGACTGGGAGCAAATCCATGCTTGGGGAAGG
CAGGTTCCTCAAAGTGACCCTGCCGCCCGCCCTCGTCAACGTGTGGGGCC
TGGTGGTTCGGGGGCTGGAAGGGGGGGAGGGAGGGAGGGAGGGGGGGAAA
CAGGTTATGACGGTCTTGATTCTGTGTCCGGAGGGTTTCCTCCCTCCCAC
GTCGGTGGACAAGGAGGAAGCCGGGGCTGGGAGGAAGAAAGGGGAGAGAA
CAGAGACGGCGGAGGCCAGAAAAGTCCCGGTGCCGCCGTTTGGGGGCAAG
GGCTTGATACCTGCCCCGCAGACGACCGGGGGCATGCCGCACACGGCGCC
GGACGAGGAAAACCGGGAGGTGTATGGGACGGCAGGGAGTCGGCACTTCG
CCCTCCGGACCCTCTCATTGGAGGATGTCATCCTTGTCACCGGGCGCCGG
AGAAAAGACCGGTTTGACTCGGAGAAAATCCTCGCGTTCGGCGATGCCCT
GCAACGGCCGACCCGTCAGCTGGCCACCACGTCCCTGCCCACCTTCTCCG
TCTCTACCCCCTCTGTTATCGCCGACTTGGTGAAGGATTTGGTGGCATGC
GAAGAAGCAGAGGCGCATACCCAGTCCCTTAGCCCTTCCTCGCCCCCCGC
CGTCCTCCCTCTCGCGCCTCTCAATTTCCCCAAGGAGCTGAAAATCAACG
ATCTTTCCTTTATTGAGGCATATTCCCGCCTTCAACCCGAGCAGGAAGCC
CTTTTTGCATCCAAGTGCCACACATGCCCCATCCTGCCGGCACAATACGC
CCACGTGCACCGCCGCCGTCGTGTGGAAGCCAAAGTCGAATCCATGCGAC
ACCTTCTATCCAACGAGTCCCTGTCCCTCTTCCCTGAGTTCCAGGACCGC
CTGCGGGTCCTGAGTGCCTTGGGGTACATTGATCCCACCACGCAGGCGGT
ACAGTTGAAAGGCAGGGTGGCGTGCGAAGTGAACACGTGCGACGAATTGC
TCTTGACCGAGACAGTCTTTGAAAACGTCTTGGCGCCCCTGACGCCCGCC
GAGATCGCCGGCCTCCTCTCCGTCCTGGTTTGCCAGGAGAAGGGGGGGCG
GGCATCCGGAAACGGGGAAGGACACGAGGCACAAGGAGGGATCTTAGACC
CAGCCACAGAAGAAGCCGCGACCATCCCACCCGCTCTGCGACACGCTTGC
AGAGAGCTGTTGGAAATTGCCAGGAATTTGGGGAACGTTCAACGGCGTTT
CAGCCTGCCCTCCGACCCGGAGTCCTACGCCGCCCAGCATGTGAACTTGA
TTGCCGTCGGGGTGGTGTACGCGTGGGCGAGTGGCGTCTCGTTTCGGGAG
ATCATGGCCACGACCGAGATCCAAGAAGGTTCCATTGTCCGGTGTATCAC
GCGCCTGGACGAGTTGTGCCGCGAGGTACGGAATGCGGCCCGCCTGATGG
GAGACCCGGCGTTGTATCGGAAAATGGAAGAAGCCAGCGAGAGGGTTCGT
CGGGACATTGTCTTTGCGGGAAGTTTGTATTTAATGTAGATAAAGGGCGA
CAGGACTGAGAAGGGAGGCGTGCAGATCGCCAGGAAACCAGAAAGGAAGA
AAAAAAAAGTGGTTTATTGCACAAAA
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protein sequence of rna3692

>rna3692-protein ID=rna3692-protein|Name=rna3692|organism=Nannochloropsis gaditana|type=polypeptide|length=91bp
MRRSCPLLITHPSIMQRFSFLSFFPSFYLFFWGCGTNGGATRRRRRRRSE
SPRECVALIPVPYSRSGSNRVTTPFQGSDCGSRNMCATLHS
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mRNA from alignment at CM002461.1:992232..992557-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3692 ID=rna3692|Name=rna3692|organism=Nannochloropsis gaditana|type=mRNA|length=326bp|location=Sequence derived from alignment at CM002461.1:992232..992557- (Nannochloropsis gaditana)
ATGCGGCGCTCTTGCCCCCTCCTTATTACCCACCCGAGCATTATGCAGCG
ATTTTCCTTCCTCTCCTTCTTCCCATCTTTCTACCTCTTCTTCTGGGGCT
GTGGCACGAATGGAGGCGCTACAAGGAGAAGAAGAAGAAGAAGAAGCGAA
AGTCCGCGTGAGTGCGTGGCGCTCATCCCTGTGCCATACTCGAGGTCGGG
TAGCAACCGTGTGACAACCCCTTTCCAAGGAAGTGACTGCGGATCAAGGA
ACATGTGTGCCACACTAGTTTCTCTCATTAGGACTGGAGCGCACTCATTA
TCAAACTTGGAAAATAGCATTCTTAA
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Coding sequence (CDS) from alignment at CM002461.1:992232..992557-

>rna3692 ID=rna3692|Name=rna3692|organism=Nannochloropsis gaditana|type=CDS|length=552bp|location=Sequence derived from alignment at CM002461.1:992232..992557- (Nannochloropsis gaditana)
CATTCTTAAATGCGGCGCTCTTGCCCCCTCCTTATTACCCACCCGAGCAT
TATGCAGCGATTTTCCTTCCTCTCCTTCTTCCCATCTTTCTACCTCTTCT
TCTGGGGCTGTGGCACGAATGGAGGCGCTACAAGGAGAAGAAGAAGAAGA
AGAAGCGAAAGTCCGCGTGAGTGCGTGGCGCTCATCCCTGTGCCATACTC
GAGGTCGGGTAGCAACCGTGTGACAACCCCTTTCCAAGGAAGTGACTGCG
GATCAAGGAACATGTGTGCCACACTACATTCTTAAATGCGGCGCTCTTGC
CCCCTCCTTATTACCCACCCGAGCATTATGCAGCGATTTTCCTTCCTCTC
CTTCTTCCCATCTTTCTACCTCTTCTTCTGGGGCTGTGGCACGAATGGAG
GCGCTACAAGGAGAAGAAGAAGAAGAAGAAGCGAAAGTCCGCGTGAGTGC
GTGGCGCTCATCCCTGTGCCATACTCGAGGTCGGGTAGCAACCGTGTGAC
AACCCCTTTCCAAGGAAGTGACTGCGGATCAAGGAACATGTGTGCCACAC
TA
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Synonyms
Publications