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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100444g4.1598.mrna |
| Orig protein id | gnl|cribi|Naga_100444g4.1598 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:915477..917207 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3665 ID=rna3665|Name=rna3665|organism=Nannochloropsis gaditana|type=mRNA|length=558bp
ATGACCGCAAATAAATTCACAATTTTGTGCGTTTCATTGCTGGTTGTCAT
CAGCAGCATTGAAGCTTTCGTGCCACGTTCTACAAGTCATCGCCTGGTGT
CAAAGAGGCTTCCATCGCCTTCAAAGGCCACATGCCCGAATCCAACGTCG
AAGACTCTACTTTTGGCCAGTAGTGGTGACGATGAAGCCGAGGAGATTGG
GGGAGCGGGTCTTGCGGTAACAGCGCTCGGACTTGTAGCATGTCCTGTTG
TTCTCTACTCGGAATACGTCCTTAAGACGACGGGGTGCGGTCTTCCGGCA
GGACCGGGCGGATCCCTTGGCGCTCTGGAAGGGATTTCCTATCTAGTTGT
CGTCGGTATTGCGGGCTGGTCCATCGTGAAGAAAATCCGGACGGGCACGG
GTCTGCCAGCAGGACCAGCAGGGTTGCTGGGGGCTGTAGAGGGCTTGAGC
TTTCTAGCCATTTTGGTCGGAGCGGTGGTTCTTGGCACCACGATCCAGCA
ATACGGGTCTGTCCCTGAGGCAGTGCCCTTGGAAGGAGGGCGCTGCAGTG
ACATTTGA back to topprotein sequence of rna3665 >rna3665-protein ID=rna3665-protein|Name=rna3665|organism=Nannochloropsis gaditana|type=polypeptide|length=426bp
MVNEDSYLVPPKLLEAFRRDGVVVLPGVFTEEEILEAKTGLATTLKIHEV
DVQDLEKTAGNLRKLSTTGGSGGVLDIFYAPWKLRLSENPRFFSAISQLW
AATYAEGRASSKGGVCMDVRRGTMEGQGEEREEERGIDATDDEQPLYAHP
HGPFDPRRGYFYLDRCGFRVPDRISAQHAKGKRPLQRSLTPHLDCCPAAL
YTSDKAVPRWRPVQSFVALTDNLGPQTGGFECVKGWHRTFQSWADHRPTC
RQTGKAAPCVGDFTPIRPVEDAEVIARFAPVYYQAGSVIAFDWRIPHANA
THHVGPEPRQVSYASFLPDVPVNREYARRQAQRFYNGLQPDDQWKENSDS
REVYGDGSVFEFSDLGRRLLGFGAEEVSLRAENEIGALERGDAGREDNLC
RFSGRRQPGDPCSAGQKRECGKQGCT back to topmRNA from alignment at CM002461.1:915477..917207+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3665 ID=rna3665|Name=rna3665|organism=Nannochloropsis gaditana|type=mRNA|length=1731bp|location=Sequence derived from alignment at CM002461.1:915477..917207+ (Nannochloropsis gaditana)
CTGTCGCATTCTAATAAATTCCCTTCACATGAATCCTGAAATTCCACAGC
CCCGGGAATGGTGAATGAAGACAGCTATCTTGTACCGCCAAAACTTCTGG
AGGCCTTTCGCCGAGACGGGGTCGTGGTATTGCCTGGAGTCTTCACTGAA
GAGGAGATACTCGAGGCCAAGACCGGGTTAGCGACAACACTTAAAATACA
TGAAGTGGTGAGCAAAACAATGATGCGATGCCGATGATGACTTCCCCGTT
TTCTTCCGCCCTCTCGAAGTTCTCCCCTGTCTGATACATATTGTTATGTC
GCCTTTCACCATGTCTCGAAAAACCTTCTCAATTTCCTTCGCTCACTGTG
ACAAATTAGGACGTTCAAGATCTTGAGAAGACGGCTGGTAATTTACGCAA
ACTTTCTACCACCGGGGGCTCCGGAGGCGTTCTAGACATTTTTTACGCTC
CTTGGAAGCTTCGCCTTTCAGAAAATCCTCGATTCTTCAGCGCGATTTCT
CAATTATGGGCAGCTACTTACGCAGAAGGACGCGCATCGTCAAAGGGAGG
CGTTTGTATGGATGTGAGAAGAGGGACGatggaaggacagggagaggaga
gggaggaagaaagagggattGACGCGACAGATGACGAGCAGCCGCTGTAT
GCCCATCCCCACGGACCCTTCGACCCCCGGCGCGGCTATTTCTACCTGGA
CCGGTGTGGTTTCCGTGTGCCTGATCGCATCAGTGCACAACATGCCAAGG
GGAAACGGCCTCTGCAACGCTCGCTCACTCCCCACCTCGATTGTTGCCCG
GCAGCGCTCTATACCTCAGACAAGGCGGTCCCACGCTGGCGCCCCGTCCA
GAGCTTCGTGGCCCTCACAGACAATTTGGGGCCTCAGACCGGCGGCTTTG
AATGCGTGAAAGGCTGGCATCGTACCTTCCAGAGCTGGGCGGACCATCGA
CCGACCTGTCGTCAAACGGGGAAAGCCGCGCCTTGCGTCGGCGACTTCAC
CCCCATCCGTCCCGTGGAAGACGCCGAGGTGATTGCTCGCTTTGCTCCTG
TCTACTACCAGGCTGGAAGCGTCATAGCCTTCGATTGGCGCATCCCCCAT
GCCAACGCCACGCACCATGTCGGGCCGGAACCTCGGCAAGTCAGCTACGC
CAGTTTTCTTCCCGATGTGCCAGTGAACCGGGAATATGCCCGGCGCCAAG
CTCAACGGTTTTACAACGGGTTGCAGCCGGACGACCAATGGAAAGAAAAT
TCCGACAGTAGGGAGGTATATGGCGATGGCTCTGTCTTCGAGTTCTCCGA
CTTGGGGCGCCGCTTGCTGGGATTCGGTGCGGAGGAAGTGAGTTTACGTG
CTGAAAATGAAATCGGAGCTCTAGAAAGAGGCGATGCGGGCAGAGAGGAC
AATTTGTGCAGATTCTCAGGACGTAGACAGCCGGGAGATCCTTGTAGTGC
GGGACAGAAAAGGGAATGTGGGAAACAAGGGTGTACCTAGAGGTTTTTCG
CAAAATTCTCATAGTTTTCTTTAAAAAGCTTATTAGATTGCCTGCATTAC
AGGAAAGGAGTGCAATATAGCTAAAGCCCTGGATTGGACCGTACGAAATC
GTCCTGTCCAGGGGTTTGCTAATCCATCGGAGACTCCTTTCTTGTGAAAT
GGACAATATAATCAAGCTCCTGTACGATAGACACGTTGGCAGGGATATAA
AGCAAATGTAGGACTATGATCGCTGTTGTCC back to topCoding sequence (CDS) from alignment at CM002461.1:915477..917207+ >rna3665 ID=rna3665|Name=rna3665|organism=Nannochloropsis gaditana|type=CDS|length=2562bp|location=Sequence derived from alignment at CM002461.1:915477..917207+ (Nannochloropsis gaditana)
ATGGTGAATGAAGACAGCTATCTTGTACCGCCAAAACTTCTGGAGGCCTT
TCGCCGAGACGGGGTCGTGGTATTGCCTGGAGTCTTCACTGAAGAGGAGA
TACTCGAGGCCAAGACCGGGTTAGCGACAACACTTAAAATACATGAAGTG
GACGTTCAAGATCTTGAGAAGACGGCTGGTAATTTACGCAAACTTTCTAC
CACCGGGGGCTCCGGAGGCGTTCTAGACATTTTTTACGCTCCTTGGAAGC
TTCGCCTTTCAGAAAATCCTCGATTCTTCAGCGCGATTTCTCAATTATGG
GCAGCTACTTACGCAGAAGGACGCGCATCGTCAAAGGGAGGCGTTTGTAT
GGATGTGAGAAGAGGGACGatggaaggacagggagaggagagggaggaag
aaagagggattGACGCGACAGATGACGAGCAGCCGCTGTATGCCCATCCC
CACGGACCCTTCGACCCCCGGCGCGGCTATTTCTACCTGGACCGGTGTGG
TTTCCGTGTGCCTGATCGCATCAGTGCACAACATGCCAAGGGGAAACGGC
CTCTGCAACGCTCGCTCACTCCCCACCTCGATTGTTGCCCGGCAGCGCTC
TATACCTCAGACAAGGCGGTCCCACGCTGGCGCCCCGTCCAGAGCTTCGT
GGCCCTCACAGACAATTTGGGGCCTCAGACCGGCGGCTTTGAATGCGTGA
AAGGCTGGCATCGTACCTTCCAGAGCTGGGCGGACCATCGACCGACCTGT
CGTCAAACGGGGAAAGCCGCGCCTTGCGTCGGCGACTTCACCCCCATCCG
TCCCGTGGAAGACGCCGAGGTGATTGCTCGCTTTGCTCCTGTCTACTACC
AGGCTGGAAGCGTCATAGCCTTCGATTGGCGCATCCCCCATGCCAACGCC
ACGCACCATGTCGGGCCGGAACCTCGGCAAGTCAGCTACGCCAGTTTTCT
TCCCGATGTGCCAGTGAACCGGGAATATGCCCGGCGCCAAGCTCAACGGT
TTTACAACGGGTTGCAGCCGGACGACCAATGGAAAGAAAATTCCGACAGT
AGGGAGGTATATGGCGATGGCTCTGTCTTCGAGTTCTCCGACTTGGGGCG
CCGCTTGCTGGGATTCGGTGCGGAGGAAGTGAGTTTACGTGCTGAAAATG
AAATCGGAGCTCTAGAAAGAGGCGATGCGGGCAGAGAGGACAATTTGTGC
AGATTCTCAGGACGTAGACAGCCGGGAGATCCTTGTAGTGCGGGACAGAA
AAGGGAATGTGGGAAACAAGGGTGTACCTAGATGGTGAATGAAGACAGCT
ATCTTGTACCGCCAAAACTTCTGGAGGCCTTTCGCCGAGACGGGGTCGTG
GTATTGCCTGGAGTCTTCACTGAAGAGGAGATACTCGAGGCCAAGACCGG
GTTAGCGACAACACTTAAAATACATGAAGTGGACGTTCAAGATCTTGAGA
AGACGGCTGGTAATTTACGCAAACTTTCTACCACCGGGGGCTCCGGAGGC
GTTCTAGACATTTTTTACGCTCCTTGGAAGCTTCGCCTTTCAGAAAATCC
TCGATTCTTCAGCGCGATTTCTCAATTATGGGCAGCTACTTACGCAGAAG
GACGCGCATCGTCAAAGGGAGGCGTTTGTATGGATGTGAGAAGAGGGACG
atggaaggacagggagaggagagggaggaagaaagagggattGACGCGAC
AGATGACGAGCAGCCGCTGTATGCCCATCCCCACGGACCCTTCGACCCCC
GGCGCGGCTATTTCTACCTGGACCGGTGTGGTTTCCGTGTGCCTGATCGC
ATCAGTGCACAACATGCCAAGGGGAAACGGCCTCTGCAACGCTCGCTCAC
TCCCCACCTCGATTGTTGCCCGGCAGCGCTCTATACCTCAGACAAGGCGG
TCCCACGCTGGCGCCCCGTCCAGAGCTTCGTGGCCCTCACAGACAATTTG
GGGCCTCAGACCGGCGGCTTTGAATGCGTGAAAGGCTGGCATCGTACCTT
CCAGAGCTGGGCGGACCATCGACCGACCTGTCGTCAAACGGGGAAAGCCG
CGCCTTGCGTCGGCGACTTCACCCCCATCCGTCCCGTGGAAGACGCCGAG
GTGATTGCTCGCTTTGCTCCTGTCTACTACCAGGCTGGAAGCGTCATAGC
CTTCGATTGGCGCATCCCCCATGCCAACGCCACGCACCATGTCGGGCCGG
AACCTCGGCAAGTCAGCTACGCCAGTTTTCTTCCCGATGTGCCAGTGAAC
CGGGAATATGCCCGGCGCCAAGCTCAACGGTTTTACAACGGGTTGCAGCC
GGACGACCAATGGAAAGAAAATTCCGACAGTAGGGAGGTATATGGCGATG
GCTCTGTCTTCGAGTTCTCCGACTTGGGGCGCCGCTTGCTGGGATTCGGT
GCGGAGGAAGTGAGTTTACGTGCTGAAAATGAAATCGGAGCTCTAGAAAG
AGGCGATGCGGGCAGAGAGGACAATTTGTGCAGATTCTCAGGACGTAGAC
AGCCGGGAGATCCTTGTAGTGCGGGACAGAAAAGGGAATGTGGGAAACAA
GGGTGTACCTAG back to top
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