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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100056g2.10466.mrna |
| Orig protein id | gnl|cribi|Naga_100056g2.10466 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:888176..890508 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3653 ID=rna3653|Name=rna3653|organism=Nannochloropsis gaditana|type=mRNA|length=1077bp
ATGAGTGTCAGTGGGCCTCTCAAGAACGCTTACGTGGAGGAGTGGATGCG
AAATGCTTTGTACTTGCCGAAACGTCCCGCTCTCCTCATGCTTAACGGTG
GAGGGGGTTCTCGTAAGCCTGCTTCGGATGAAGACATTTTAGAGCCTCGT
ACAGGGTCTCCGCCTCTTTATGGCTATGGAGGAGATAAAGGTGATTTGTT
CGAGTATTATGATGCTTTTGGCGTGCATTCGCAAGCAATGCATGAGGCTG
TCTGGAAGCTGGATCACCTTGACAAATACAACTTTCATGCTTTGGTCCAG
GTTGGAAAATCGACGCCAAAACCTGCGAAATGGCATCCAGGTCCGGGTGG
ACACTTGCTTCGGGCTCAGATATTGGCACACCACTATCTGAGATTACTGG
ACGAAGCCATCATATCAGTGCTGGCAGCATTAAATGGAGAGAATACCATG
CTTAAATTGGAAACGCTTTTGGAAACGACGACTCCACTTGAGCAAGACCC
GACTGTGAACGAATTCAAGCTTCCACCCCCGTTGTATTGTGATGACTTCT
TTTGCGGGTCTCCAGCTTCATGCGCCATGACCTTTGAGCCGATCGCTCAA
GGGTCACTCTTAGAACTCGTCGTCTCCCCGCCGGAGCCGAAGACGGCAAA
GCCAACGATAGAGTCTCAAAACAACAGTGTGTGGCACACACAACTTATTA
CCTATGATCAGAATGCTGTCGTAAATGCCCGAAACCGTGGTGCTCAATAC
TTAGATATGAAATACGTGCTTCAGGGCAACAAGTATGCAGGGCCTTTAGT
GCTGGGAGTGAAAACGCATAAAAAGCACCACATGCTATTTTGCCAGCCGC
CGGGAAGCGGACAGAATCAAGCTCCTATAGGCCGCAATTCCAGCGTTCTC
GTCGATGGTAAAGACTCACCTTTCGAATTGGAAGACAGTTTTTACTTGAC
TCACACAATTCGAGCACCCTGCTGGGCCACAAAACATCAATTGGAGCCAG
GAAACCACACAATCACTATTACCCCCACAAATGCAGATGGAAAATATATA
AGCTTATCGGCAGTCATCTGGTTTTAG back to topprotein sequence of rna3653 >rna3653-protein ID=rna3653-protein|Name=rna3653|organism=Nannochloropsis gaditana|type=polypeptide|length=657bp
MSPLEADGATAGRGTDYDRHHLLQRDDEETCIDGLNTSNKHQNEEFWRKK
TSRWDEGSSLRRMLKVFIFVTVLLFVTNLVYETQSSKKSDDLSLATIQHG
ESSSADEENEVAAAAEDEGLHQETSSNGNKADLIQMSVANDTAKMLTARQ
TIASALKALQKDVGPEYASELFGSVRFWNRSYIKQKLIRALLGQNGCPGK
AQSDHDFIMSFAGTSVTAGHDNYFNQSYPIVLERLLLDSYTAAGLNLEVR
NHAMGNNPAIPAAFCVRSQLGEDTDVAAWEFEMMVSGPLKNAYVEEWMRN
ALYLPKRPALLMLNGGEGAREPDAEGALPVDARTGPPPPFSYGGDKGDLF
EYYDAFGVHSQAMHEAVWKLDHLDKYNFHALVQAGKPTPKPAKWHPGPGG
HLLRAQILAHHYLRLLDDAIVVVQETFSETGQDNPTIDIIDGADSAVRKD
MGTYSAGIENVEDATLGLPPPLYCDHFFCGSPASCAMTFEPKEQGSLLDL
VLSPANLRSTKPTVEPQKPKLWHVQLYAADFDAVVFSKKQGFQYLDMKYV
LQGNHKAGPLKLAVKSRSENHIFFCQPPKVWGHMPAHCGDLKDDAVVKID
EKRVSMVKSSSLYDKESSQPPNCWISEWKVKPGSHVITITPTNSDGSYVA
LSALIWF back to topmRNA from alignment at CM002461.1:888176..890508+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3653 ID=rna3653|Name=rna3653|organism=Nannochloropsis gaditana|type=mRNA|length=2333bp|location=Sequence derived from alignment at CM002461.1:888176..890508+ (Nannochloropsis gaditana)
GAGCAAAGCATGGAAGTGTCGGACAAAATACAAGGAGAGAACTGCCTAAC
GGATAGACACTTCCTGTCATTTAACATTTACGCATGGCCTTCCGCCACTT
TTTCAGCCAGGCACCGAACCTCCTCTTCAAACCATGTCCCCACTAGAGGC
CGATGGGGCCacagcagggagaggaactGATTACGATCGACATCACTTGC
TCCAACGAGACGATGAGGAGACTTGTATCGATGGGCTCAACACGTCAAAT
AAGCACCAGAACGAGGAAttttggagaaagaaaaccAGCCGATGGGACGA
GGGAAGCTCACTGCGCCGCATGCTCAAGGTGTTCATCTTTGTGACCGTGC
TCCTCTTCGTGACAAATCTGGTCTATGAAACGCAAAGCAGTAAGAAATCG
GATGATCTTAGCCTGGCTACAATCCAGCATGGAGAGAGCTCGAGCGCAGA
CGAGGAAAATGAGGTTGCCGCAGCTGCCGAAGATGAGGGTTTGCATCAAG
AAACATCCAGCAACGGGAACAAGGCAGATCTTATTCAGATGAGTGTGGCA
AATGACACCGCCAAGATGTTGACTGCTCGGCAAACCATCGCCTCTGCCCT
TAAGGCGCTTCAAAAAGATGTAGGGCCCGAGTATGCTTCGGAGCTGTTTG
GGTCAGTACGTTTTTGGAACAGAAGCTACATCAAGCAGAAGCTGATTCGC
GCTCTGCTGGGTCAGAACGGCTGTCCGGGCAAGGCCCAGAGTGACCACGA
CTTCATCATGTCTTTCGCAGGGACCTCTGTGACGGCTGGGCATGACAATT
ACTTCAATCAGTCCTATCCGATTGTTCTAGAAAGGCTTTTGCTCGACTCG
TACACTGCTGCAGGATTGAATCTGGAAGTCCGAAATCATGCTATGGGAAA
CAATCCTGCCATTCCCGCGGCATTCTGTGTGAGGAGCCAATTAGGAGAAG
ACACGGATGTGGCGGCTTGGGAGTTCGAGATGATGGTCAGTGGGCCTCTC
AAGAACGCTTACGTGGAGGAGTGGATGCGAAATGCTTTGTACTTGCCGAA
ACGTCCCGCTCTCCTCATGCTTaacggtggggagggtgctCGTGAGCCTG
ATGCGGAGGGCGCACTTCCAGTAGACGCCCGCAccgggcctccacctccg
ttCAGCTATGGAGGAGATAAAGGTGATTTGTTCGAGTATTATGATGCTTT
TGGCGTGCATTCGCAAGCAATGCATGAGGCTGTCTGGAAGCTGGATCACC
TTGACAAATACAACTTTCATGCTTTGGTCCAGGCGGGGAAACCGACGCCA
AAACCTGCGAAATGGCATCCAGGTCCGGGTGGACACTTGCTTCGGGCTCA
GATATTGGCACACCACTATCTGAGATTACTGGACGATGCTATTGTCGTGG
TACAAGAGACATTTTCCGAGACTGGCCAAGATAATCCCACAATAGATATC
ATAGATGGTGCTGACAGTGCTGTCAGAAAAGACATGGGTACCTATTCCGC
AGGAATAGAAAATGTGGAAGACGCTACGttgggcctccctccccctttgt
ACTGTGACCACTTTTTCTGTGGCTCTCCGGCTTCATGCGCTATGACTTTC
GAGCCCAAAGAACAAGGGTCACTGCTCGACCTCGTTCTCTCACCTGCGAA
CTTAAGATCGACCAAGCCTACCGTTGAGCCTCAAAAGCCCAAATTGTGGC
ACGTGCAGCTGTATGCCGCCGACTTTGATGCTGTGGTCTTCTCGAAAAAA
CAAGGTTTTCAATACTTGGATATGAAGTACGTGCTTCAAGGTAATCACAA
AGCTGGGCCTTTAAAGTTGGCTGTCAAATCACGAAGCGAAAATCATATCT
TCTTTTGTCAACCGCCAAAGGTATGGGGACACATGCCAGCGCATTGTGGA
GATCTGAAAGATGATGCGGTAGTAAAAATAGATGAAAAGCGCGTCTCAAT
GGTCAAGTCGTCAAGTCTTTACGACAAGGAATCCTCGCAGCCACCCAATT
GCTGGATTTCGGAGTGGAAAGTCAAACCGGGGTCACACGTTATTACCATC
ACTCCCACAAATAGTGATGGAAGCTATGTTGCCTTGTCGGCCTTGATCTG
GTTTTGAAATCTGTAGGAAATTTCAAGCCTTTCGACGGACATATCTCTAT
TTTTTGCGAGCATACTACATGTGTATAAATAACCACGCTCGGATGGAAAG
AAGTGCGGTCTGtatggggaaaaaaagaatacATACAAAACGTGTCATGC
TTTGTGAAGATGTGACCATGCCTCCACGTCCGAATATGTTACTGCTCCCT
TTTTTTATTAAAGGAAAAGGTGCGAAATTTAGA back to topCoding sequence (CDS) from alignment at CM002461.1:888176..890508+ >rna3653 ID=rna3653|Name=rna3653|organism=Nannochloropsis gaditana|type=CDS|length=1974bp|location=Sequence derived from alignment at CM002461.1:888176..890508+ (Nannochloropsis gaditana)
ATGTCCCCACTAGAGGCCGATGGGGCCacagcagggagaggaactGATTA
CGATCGACATCACTTGCTCCAACGAGACGATGAGGAGACTTGTATCGATG
GGCTCAACACGTCAAATAAGCACCAGAACGAGGAAttttggagaaagaaa
accAGCCGATGGGACGAGGGAAGCTCACTGCGCCGCATGCTCAAGGTGTT
CATCTTTGTGACCGTGCTCCTCTTCGTGACAAATCTGGTCTATGAAACGC
AAAGCAGTAAGAAATCGGATGATCTTAGCCTGGCTACAATCCAGCATGGA
GAGAGCTCGAGCGCAGACGAGGAAAATGAGGTTGCCGCAGCTGCCGAAGA
TGAGGGTTTGCATCAAGAAACATCCAGCAACGGGAACAAGGCAGATCTTA
TTCAGATGAGTGTGGCAAATGACACCGCCAAGATGTTGACTGCTCGGCAA
ACCATCGCCTCTGCCCTTAAGGCGCTTCAAAAAGATGTAGGGCCCGAGTA
TGCTTCGGAGCTGTTTGGGTCAGTACGTTTTTGGAACAGAAGCTACATCA
AGCAGAAGCTGATTCGCGCTCTGCTGGGTCAGAACGGCTGTCCGGGCAAG
GCCCAGAGTGACCACGACTTCATCATGTCTTTCGCAGGGACCTCTGTGAC
GGCTGGGCATGACAATTACTTCAATCAGTCCTATCCGATTGTTCTAGAAA
GGCTTTTGCTCGACTCGTACACTGCTGCAGGATTGAATCTGGAAGTCCGA
AATCATGCTATGGGAAACAATCCTGCCATTCCCGCGGCATTCTGTGTGAG
GAGCCAATTAGGAGAAGACACGGATGTGGCGGCTTGGGAGTTCGAGATGA
TGGTCAGTGGGCCTCTCAAGAACGCTTACGTGGAGGAGTGGATGCGAAAT
GCTTTGTACTTGCCGAAACGTCCCGCTCTCCTCATGCTTaacggtgggga
gggtgctCGTGAGCCTGATGCGGAGGGCGCACTTCCAGTAGACGCCCGCA
ccgggcctccacctccgttCAGCTATGGAGGAGATAAAGGTGATTTGTTC
GAGTATTATGATGCTTTTGGCGTGCATTCGCAAGCAATGCATGAGGCTGT
CTGGAAGCTGGATCACCTTGACAAATACAACTTTCATGCTTTGGTCCAGG
CGGGGAAACCGACGCCAAAACCTGCGAAATGGCATCCAGGTCCGGGTGGA
CACTTGCTTCGGGCTCAGATATTGGCACACCACTATCTGAGATTACTGGA
CGATGCTATTGTCGTGGTACAAGAGACATTTTCCGAGACTGGCCAAGATA
ATCCCACAATAGATATCATAGATGGTGCTGACAGTGCTGTCAGAAAAGAC
ATGGGTACCTATTCCGCAGGAATAGAAAATGTGGAAGACGCTACGttggg
cctccctccccctttgtACTGTGACCACTTTTTCTGTGGCTCTCCGGCTT
CATGCGCTATGACTTTCGAGCCCAAAGAACAAGGGTCACTGCTCGACCTC
GTTCTCTCACCTGCGAACTTAAGATCGACCAAGCCTACCGTTGAGCCTCA
AAAGCCCAAATTGTGGCACGTGCAGCTGTATGCCGCCGACTTTGATGCTG
TGGTCTTCTCGAAAAAACAAGGTTTTCAATACTTGGATATGAAGTACGTG
CTTCAAGGTAATCACAAAGCTGGGCCTTTAAAGTTGGCTGTCAAATCACG
AAGCGAAAATCATATCTTCTTTTGTCAACCGCCAAAGGTATGGGGACACA
TGCCAGCGCATTGTGGAGATCTGAAAGATGATGCGGTAGTAAAAATAGAT
GAAAAGCGCGTCTCAATGGTCAAGTCGTCAAGTCTTTACGACAAGGAATC
CTCGCAGCCACCCAATTGCTGGATTTCGGAGTGGAAAGTCAAACCGGGGT
CACACGTTATTACCATCACTCCCACAAATAGTGATGGAAGCTATGTTGCC
TTGTCGGCCTTGATCTGGTTTTGA back to top
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