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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100056g5.10477.mrna |
| Orig protein id | gnl|cribi|Naga_100056g5.10477 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:883471..885025 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3650 ID=rna3650|Name=rna3650|organism=Nannochloropsis gaditana|type=mRNA|length=1398bp
TGACAGACAGTAGTCATGACACAGTCAAAACTATCAGCGTTTTTTCGTTC
GTCAAGCCACAAGAAAACTGCGCCGAAAACGGGCGAGGACTGTTCGTCTG
AATCGCGGCTGGAAAAACGGGTTTTGGACGACATTGACGATAACAGTGGT
ACATTGGAGAAGCATGACGTTGTGGCTGTTGTACAGCCTCCCGAGAAGAA
AACGGCTTGCGGAAAAAAAATCGAGGTTACCGCTGCATCGTTGGCTTTTG
CTGCTCCCTTGAAGTCCTCCCCTACTCCATCGCCCTCTCCTTGTCTGCCA
CCGGCCCTGACAGCCCATCCCGTGCTGCAGTCTCTCGACGCGATGGACGA
TGGTTGGCGTCACTTTGTCGTATCTCAGGCTGGCAAACCCTACTTTTCGC
GGCTTCTTGCATTCCTTTCGCAAGAAATTTCTAGTAGGCAAGTTGTGTAT
CCACCCTATCCCTTAGTGTTCTCTGCCTTAACCCTCTGCCGCTGGCTGGA
TGTCCGGGTAGTTATCATAGGCCAAGACCCTTATCATGGACCGAATCAAG
CGCATGGGCTGGCATTTTCAGTGCTGCCTCCTACGCAGCCCCCTCCGAGC
CTCAACAACATGTTCAAAGAGGCGATGGAGGACGTCAGCGGATTCACTAA
GCCCTCTCACGGAAACTTGGAAGCCTGGAGCCGGCAAGGTGTCCTTTTGC
TCAACACGGTGCTCACAGTTCGTCGTGGGCAGGCCAATTCGCATAAGGGT
AAAGGATGGGAAACGTTCACGGATGCTGTGATCAAGGAGCTGGACGTGAA
GAAGAAGGGGTTGGTCTTTGTTTTATGGGGGAAGCCTGCGCAGGAAAAAT
GTAAAAGCATCAATCGCGCAAAGCATAGGGTCATCCGATGCGCGCACCCC
TCACCGCTCTCCGCAACCAAGACAAACGCACCATTTATTGGATCCAAAAG
CTTCTCGCGGACAAATGCTGCACTTGTGGAACTTGGAAAAGAGCCGATCG
ACTGGCGCTTGTGATCCATGCGGGCCATAAGGCTCTCAAGATTGAGGACG
TGGCCGAAGGCCGTCGCACAATGTAGCCAAGCTTGCCCAGGCTCTGCAGA
GCGCGAGATTTATCCAGGCAGAAAGTTTTGGTTGGAATACGTTCTACGTT
GGACAGGGCATGCGGGCCGTCTGTACAGATAATGGGGGGCACAGTCTGGG
AGGCATGGGGCTCGGCTCAGGGATGGCGCAAGGAACGGAAGAGGGGCTGA
AGTTCCGTTTGACGTTACGTTACATGATGACTTACAAATATGACTTTTGA
CAAGCTTTTTGGACTCTTTGTCAAATGTCTGTTGCTCTCCCTGGAAGAGC
GACCGCGACCGAGGCGGCGATATGAAGAACGTATACTTAGTTCTCTCA back to topprotein sequence of rna3650 >rna3650-protein ID=rna3650-protein|Name=rna3650|organism=Nannochloropsis gaditana|type=polypeptide|length=361bp
MPRPSQHLSTCSPSWLSPNSRLKQITAKRVFLATFIIATLAWGLGLAAVL
LPEWTVEDANVQSTLDAHIGLFETIYHVGEVRESSTPRFCNGLGPMYSTE
KCVWWRISQITALLSLGMGYTGVLLLFLVIGSSWIRPQHVYSLAAWVWNI
FLFAGVCGIGSAAAWNLLVLAFLRDHRELQDGYSVHMGLSMFVMAAMGAV
FISLPLWRMVFERCILTWSSSSGTLAGRMWPFATRNASLESAGSSKIQSG
NFPGHKSGQGSGSGCARTGNALVNEEEGVVEAKSSRGCAGARSPRRGVAS
YCGGNQPNILETWNSQEIRHLNECGKVAGSQSAGMGEGKETSEIGLEEGN
TFMGITSPLSQ back to topmRNA from alignment at CM002461.1:883471..885025- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3650 ID=rna3650|Name=rna3650|organism=Nannochloropsis gaditana|type=mRNA|length=1555bp|location=Sequence derived from alignment at CM002461.1:883471..885025- (Nannochloropsis gaditana)
AACATAATGTCCATATTTTCTGAGCAATCCAAACTCAAATCTTGACATAT
AATTACTTGTCTGAATTTCTCCGGATTCACGACAGTTTTTGCTTAGCTGA
AAAATTCCCTGTCATTGCATTTCCTCTAGTACAAGCAGCCCGGGCTTTGC
TTCCACATAAACCTCTCGCAGGTGCGCTCATGCCGCGACCTTCCCAGCAC
CTGTCAACCTGCTCGCCATCGTGGCTGTCTCCTAACTCAAGACTTAAACA
AATTACTGCCAAACGCGTCTTTTTGGCAACTTTCATCATTGCCACTCTGG
CTTGGGGTTTGGGCTTGGCTGCTGTTCTCCTGCCGGAGTGGACCGTAGAG
GATGCAAACGTTCAGAGCACCTTAGATGCTCACATAGGGCTTTTTGAGAC
AATATATCATGTTGGAGAAGTTCGAGAATCATCAACTCCTCGTTTTTGTA
ATGGTCTAGGTCCCATGTATTCAACGGAAAAATGTGTTTGGTGGCGAATT
TCGCAAATAACAGCTTTGTTGAGCTTGGGCATGGGATATACTGGCGTCCT
GCTACTCTTTCTGGTTATAGGGAGCTCATGGATCCGCCCGCAGCATGTTT
ATAGTCTTGCGGCTTGGGTCTGGAACATCTTCCTCTTTGCTGGAGTCTGC
GGTATCGGCAGTGCGGCTGCCTGGAATCTTCTGGTTCTCGCTTTCCTTCG
TGACCACCGCGAGCTCCAGGATGGCTACTCTGTTCATATGGGGCTCTCTA
TGTTTGTGATGGCAGCAATGGGAGCCGTCTTTATTTCGCTGCCATTGTGG
CGCATGGTATTTGAGCGTTGTATCCTGACTTGGAGTAGCAGTTCCGGTAC
TTTAGCTGGCCGGATGTGGCCCTTTGCGACCCGAAATGCGAGCCTGGAAA
GCGCGGGGTCGAGCAAAATTCAGAGTGGCAATTTTCCAGGGCATAAGAGT
GGTCAAGGAAGTGGAAGTGGTTGCGCTCGCACTGGCAATGCCCTCGTCAA
CGAGGAAGAAGGCGTCGTCGAAGCGAAAAGCAGCAGAGGCTGTGCGGGGG
CCCGTTCCCCTAGGCGTGGCGTGGCCTCATACTGTGGAGGAAATCAACCC
AATATCCTAGAGACATGGAATTCACAGGAGATTCGACATTTGAACGAGTG
TGGAAAGGTGGCGGGAAGCCAGAGTGCGGGCATGGGGGAGGGGAAAGAGA
CAAGCGAGATCGGGTTGGAGGAGGGAAATACGTTCATGGGTATCACAAGT
CCATTGTCACAGTAATAGCTAGGCACAAAACTGTAAACCAGAAAATTGGA
GAAGACGTGATGGCTCGATGTAAAATAAAAAGGAAGATGTGAGGCATGTA
TGTGTGAGAGAACTAAGTATACGTTCTTCATATCGCCGCCTCGGTCGCGG
TCGCTCTTCCAGGGAGAGCAACAGACATTTGACAAAGAGTCCAAAAAGCT
TGTCAAAAGTCATATTTGTAAGTCATCATGTAACGTAACGTCAAACGGAA
CTTCAGCCCCTCTTCCGTTCCTTGCGCCATCCCTGAGCCGAGCCCCATGC
CTCCC back to topCoding sequence (CDS) from alignment at CM002461.1:883471..885025- >rna3650 ID=rna3650|Name=rna3650|organism=Nannochloropsis gaditana|type=CDS|length=1086bp|location=Sequence derived from alignment at CM002461.1:883471..885025- (Nannochloropsis gaditana)
ATGCCGCGACCTTCCCAGCACCTGTCAACCTGCTCGCCATCGTGGCTGTC
TCCTAACTCAAGACTTAAACAAATTACTGCCAAACGCGTCTTTTTGGCAA
CTTTCATCATTGCCACTCTGGCTTGGGGTTTGGGCTTGGCTGCTGTTCTC
CTGCCGGAGTGGACCGTAGAGGATGCAAACGTTCAGAGCACCTTAGATGC
TCACATAGGGCTTTTTGAGACAATATATCATGTTGGAGAAGTTCGAGAAT
CATCAACTCCTCGTTTTTGTAATGGTCTAGGTCCCATGTATTCAACGGAA
AAATGTGTTTGGTGGCGAATTTCGCAAATAACAGCTTTGTTGAGCTTGGG
CATGGGATATACTGGCGTCCTGCTACTCTTTCTGGTTATAGGGAGCTCAT
GGATCCGCCCGCAGCATGTTTATAGTCTTGCGGCTTGGGTCTGGAACATC
TTCCTCTTTGCTGGAGTCTGCGGTATCGGCAGTGCGGCTGCCTGGAATCT
TCTGGTTCTCGCTTTCCTTCGTGACCACCGCGAGCTCCAGGATGGCTACT
CTGTTCATATGGGGCTCTCTATGTTTGTGATGGCAGCAATGGGAGCCGTC
TTTATTTCGCTGCCATTGTGGCGCATGGTATTTGAGCGTTGTATCCTGAC
TTGGAGTAGCAGTTCCGGTACTTTAGCTGGCCGGATGTGGCCCTTTGCGA
CCCGAAATGCGAGCCTGGAAAGCGCGGGGTCGAGCAAAATTCAGAGTGGC
AATTTTCCAGGGCATAAGAGTGGTCAAGGAAGTGGAAGTGGTTGCGCTCG
CACTGGCAATGCCCTCGTCAACGAGGAAGAAGGCGTCGTCGAAGCGAAAA
GCAGCAGAGGCTGTGCGGGGGCCCGTTCCCCTAGGCGTGGCGTGGCCTCA
TACTGTGGAGGAAATCAACCCAATATCCTAGAGACATGGAATTCACAGGA
GATTCGACATTTGAACGAGTGTGGAAAGGTGGCGGGAAGCCAGAGTGCGG
GCATGGGGGAGGGGAAAGAGACAAGCGAGATCGGGTTGGAGGAGGGAAAT
ACGTTCATGGGTATCACAAGTCCATTGTCACAGTAA back to top
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