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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100056g9.10473.mrna |
| Orig protein id | gnl|cribi|Naga_100056g9.10473 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:877703..879224 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3646 ID=rna3646|Name=rna3646|organism=Nannochloropsis gaditana|type=mRNA|length=1863bp
CCGTAATCCGCCTCATCCGGCACCACCACGGGTGTCATGGCCATGGAGAC
AACATGAGAGTGAGTTGTACACCATGCTGTGAAGGAAAGGCGGACAGGCC
GCAGGTTTCGGTGGTCATGTCGAGGATTTATTTCTGTTGCCCCGATTGTT
ACTCGTGGCCTCGGAAACAACTTGACAGGCCCTTCAACCCATCGCAGGGT
TGCTGCGGTGGGCGGCTTTCGAGACGGGAATCCGCGCGAATGGGTGAAAT
TCTTTAACGTGGCACGATCGGCACGAATGTCTTCATGCCAATGTATCCTC
CCTGGACTGCCAGACAGTATCACGAAGCTTTAGAAAAGCAGCAAAGACAG
TCGAGTATCTCCTCCTCACTTTACGACATGCAACACATACATCAGGACGG
CGTCCCCTCAAGAACTGCGTTGTTGTGATTAGGCACCATGAAAAAGAGCT
TCTTTGGTGGCGTCTCGCGACAGTCCCACGGGATACTGATAAGAGTATTC
TTGTGTGCTATACTGGCGTCCTCATCTTCAGCCTATACCATAAATTCTCC
TTCCCGGTCAGTTTCCGCCTCCCCATTGTGGCGGCCTCTCCGGGAGTCGA
AGCCCCCCCGTGCCTCCACGCGACTTCATTCCGCCGCTTCCTCCGGTCCG
GGAGCCTTTGAAAACGATGACAGTGGATGGAAAGACGTGACCTTCATCCC
TCAAAAAACAGCCGACCTGAAGCCTGGAGCATTCCGCCTGCCCCGACTTA
CAGACTTCTTCGCCACCCTGCCGCCCGCCTCGCGATGGCACAAGCTGCTG
CGCCGGAAGAAACCCGCGTACGAAAGCTTGAGGCATGACGACTACGTCGA
GGCCTGTCGCTCTTTGGGGGTCCCTCCTGACATCGAGGAGGACAAACTCG
CCGCCAAGGTTGAAGCCTTGCTGGTCAAGTATGAGAAGGACCGGAAGAAG
CGGATTATGATCGATTGGGCTAGGGACAAGATTTTCGAGCACCGCATCTT
CCTGCAGCTGGACGGACAGGCGGTGAAGCCTCCGGGGGGCATGGACATGC
GCCTGCTTGACGAGAGGTTTCTAGAAATTTCCCCGAAAGATACCCTGGAC
CTGATGACGGCCCTCGACCTCTCGCCCGCGGATTTGAAAGGGAAACCGGG
CCCGCTCACGGCCGTGGTGAACAACCCCTTGCTGCGAGCATTGCAGATCA
CCCGCTTGGTGAAAATGGGGCGGTTCGTACTGATGGCGTTCGGCGAGTCC
CTGGAAGCCCCCAACCTCCGGCGCTTGCTGTGGCCGGGTACTGTGGGGCT
GGCCTTGGCGCTCTGGTTCGGGAACGCGGTGGACTTCGTCCCTTTGAAAT
ACGTGATCACCACCGTCGCCCACGCAGGGCCCATATACAACCGTGGGGAG
GCCAAGCTGGCAAACAGGCGGGAGCGGCGGCCCATCAAGTGGACGAAGCT
CCTCTTGTCCTTGGCTTTCATGGCATTGTCGACCGCGGGGGCCTGGGCGG
GCGGTAGAGCCTGGTGTGCCTTGAAGTATCCGACGGGGGACTTGCCGGAA
AATATATTTGTCCCCTTGGTGGCGAATCTGGTGACCTACGTCATGAGTTC
ATGTTTCTTCATTCGAGAGAGCACGTTGGCAGGGGGCCGCGCGGCGCGGG
ACGCAGAGGGTGGCGACGGAGGGAAGGGGGGGAGAGGGGGAGGTCGAAGG
CCAGCGTGATCTCAATCCAAAGGGGGGAATGACAGGCGGAATCAGGCGTG
ATTGGACAAAGAATACGGGGATGAGTGGTGAGTAGATGCGTGGGATCCCC
CCCACGCACAGCATGGCGGTTGTGGCGGCTAAAGAAATCCCAAAACCGAG
TCGCGGCACCCGA back to topprotein sequence of rna3646 >rna3646-protein ID=rna3646-protein|Name=rna3646|organism=Nannochloropsis gaditana|type=polypeptide|length=169bp
MLVGRMPGAAAGQQGPPLQPSQRPGSPSSGPTPVSLPPQHQQPAPQQQHQ
YQQQQQQLQQLSHQFPSKEEGPGGRAGATAIMLPASATAAQHPSMGAGVG
AGGGGGGGPLSLPSVGGMVGGLAQLQQRPQQYGGGGGGGRGPNGFGSSGP
TDEGAEGDEDDDLLDEDDT back to topmRNA from alignment at CM002461.1:877703..879224+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3646 ID=rna3646|Name=rna3646|organism=Nannochloropsis gaditana|type=mRNA|length=1522bp|location=Sequence derived from alignment at CM002461.1:877703..879224+ (Nannochloropsis gaditana)
CATCATGTCTCTGGCGCCATCTCAGCACTTTTCCCGAGCTCATCCCCATC
ACTCTTGTCTCCATTGTTTCTCACCAATAAAGACTTTCAGTTGCGCCCGG
AGGACACCGATTGCCGGGGGAGTGCATAGTTACATtcagggaaggcagga
gtgGCTGAGACTGAGGGAAGATCAGGCGGTACACTAAGAGGGATACAGCC
CATTATCAGCACGCGCATCGCCCGCAATCCATAAAAAGAAAGGACCTCCA
CAAACATTCATTGCCATGGCCTCACTTTATCCGTCGCATCCTGCGGGCAA
CGACGAGGGCAGCGCGGGCTCGTACTCTGTCTCAGATAACGGCTCCCCCA
TGCCGGCTGtgggtcgaggggggggcggaggagggaggggggggggacaa
aagcaggggggagaggtggcggaaagcgagggggTAATGCCGGTGTTGGT
GGGGACGACAAGCGCAACAAGAAGCTGGAACTCAATCGCATTGCCTCACG
GGAGAGTCGAAAACGGAAAAAGCGTCGCCTGGAGGAGCTTCAACGATCTG
TCCTTTACTTGACGCACGAGAACCATCAACTCCGTGAACAAAACGAGCTT
CTGCGGCAAATGCTGGTGGGGCGCATGCCAGGGGCGGCCGCCGGTCAGCA
GGGTCCGCCGCTCCAGCCCTCGCAACGTCCAGGCAGCCCCAGTTCAGGGC
CCACACCCGTATCACTGCCGCCGCAGCATCAGCAACCGGCGCCgcaacaa
caacaccaatatcagcaacagcagcagcagctccaGCAGCTTTCGCACCA
GTTTCCgtcgaaagaggaaggacctGGCGGGCGGGCAGGTGCTACGGCCA
TAATGCTTCCCGCCTCTGCCACGGCCGCGCAACACCCGAGCATGGGAGCG
GGAGTGggggccggcggaggagggggaggaggacctctATCGTTGCCCAG
TGTAGGAGGGATGGTCGGGGGGTTAGCCCAGCTCCAACAGCGACCACAAC
AgtacgggggagggggagggggagggcggggtcctAACGGATTTGGGAGC
TCCGGCCCCACGGacgagggagcggagggcgacgaggacgatgatcTCCT
TGACGAGGATGACACATAGATGGGACAGGGGGGGGTGCCAATAAGGGGGA
CACGTCTGGTTTGAGAAATTACTGCGCGCCCACGACTCCCACCGCGtgtg
ccggggaggaagggacacgCTTGTGTGGACGAGTGCTTAAGGATCAAAAG
TTTTTGACGACACAGACACGTGTATGGATTTTGCAGGGAAACAATGGGGT
TTTGCAAGCCGAGCAAATTTGTGTATAGCGAGAAGTGGTTGATGCCACGG
GACCTACGGGGGATGTGGTTCCTCAGAGGCAACCATTGGATTCTCATTCA
TAAATGTCGAATCAATTTCACCGGCATTCACTGATATTTGTTTAGAGAGG
CCATGGAAATCTCAACAGATGGAAACAGAACGGCAGAGATCAAAGAAGCA
CGGACTTGTCAAGTTCCAAAAA back to topCoding sequence (CDS) from alignment at CM002461.1:877703..879224+ >rna3646 ID=rna3646|Name=rna3646|organism=Nannochloropsis gaditana|type=CDS|length=510bp|location=Sequence derived from alignment at CM002461.1:877703..879224+ (Nannochloropsis gaditana)
ATGCTGGTGGGGCGCATGCCAGGGGCGGCCGCCGGTCAGCAGGGTCCGCC
GCTCCAGCCCTCGCAACGTCCAGGCAGCCCCAGTTCAGGGCCCACACCCG
TATCACTGCCGCCGCAGCATCAGCAACCGGCGCCgcaacaacaacaccaa
tatcagcaacagcagcagcagctccaGCAGCTTTCGCACCAGTTTCCgtc
gaaagaggaaggacctGGCGGGCGGGCAGGTGCTACGGCCATAATGCTTC
CCGCCTCTGCCACGGCCGCGCAACACCCGAGCATGGGAGCGGGAGTGggg
gccggcggaggagggggaggaggacctctATCGTTGCCCAGTGTAGGAGG
GATGGTCGGGGGGTTAGCCCAGCTCCAACAGCGACCACAACAgtacgggg
gagggggagggggagggcggggtcctAACGGATTTGGGAGCTCCGGCCCC
ACGGacgagggagcggagggcgacgaggacgatgatcTCCTTGACGAGGA
TGACACATAG back to top
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