rna3638, rna3638 (mRNA) Nannochloropsis gaditana

Overview
Namerna3638
Unique Namerna3638
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length954
Alignment locationCM002461.1:860615..862429 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100056g18.10471.mrna
Orig protein idgnl|cribi|Naga_100056g18.10471
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:860615..862429 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100056g18gene3505Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27058.1cds3629Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3638rna3638-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3638 ID=rna3638|Name=rna3638|organism=Nannochloropsis gaditana|type=mRNA|length=954bp
ATGGTGGGGGGAGGAGGGGAACAAAGGGAGCAGGGCCCAGGGGGGGAGGG
AGGGGAGGTCGGGCAGGTAGGGGGCCACGAGGAGGCGGAGCACGCCGGGC
GCGTGCAGGAGGGGAAGTGTGACGAGGAGGAGGCAGGTAGCGTCTTGGAC
GCGCCGACGGACTGGAATCAGGTCAGAGAAGAGCAGGAGAGTCCGGGAGG
GGAGGGATCGGGGGGGGGGGAGGGGGAGGGGGAGGACGCGGGGGAAGTGG
GGCTGGGAGAATCCTGTGCGTCAGATCTGCAGCAGGACCCCCTCTACCTT
CAAGAAGTGGAAAATCAGCTCGAGTCCTTCTGGGTGGAACACATGGCAGC
GCAGCAAGCGGCAGCATCCGGGAATGCAGGCGGGGAGGACGGAGGCGGGC
GGGGACAGGCAGAGGGCAGTGATCTAATCTACCCGCAAAGCAGCGATCCT
GCAGACTACCCCAGCCCGTACTCGGTCCAGGGAGGGAGCAGACATGACGT
TTCCGCGCCCACTTTGTCGTCACAGCCGTCGTCTTACCCGGAATCGCAGC
ATTACGGACGCTACCCTCCCTCCGAATATGCCTTGGTGCCAGGGGATCGA
TCCCACCATCAATGTCTATGGGCCCGTGAACGTCTTTATGGGCGGCGCAG
GGCATGGGGGGTCGGCGGGCGCCAAGCGAGAGCGAGACCCACCAAGACCA
CCGTCATCCTTCCAGCAGCAACGACAACACCAGCACCAGCCTCCACCACC
CCCGTCGCCACCACCCGCACCCCCAGACGGAAACGGTCGTACATACTGAC
TGTCGATCATGAGACACTGAGTGTCGATCATGGCATGGGTAGATGGGGAA
GCGAATCGACAGAGGAGGGAGCCACGGACGTTGTGGGGCCCGCGTGCGCC
CATGCGGGCATTTGGAAATGTGTAAGAAAGGGGTACCGGAAAGTCAGAAA
ATGA
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protein sequence of rna3638

>rna3638-protein ID=rna3638-protein|Name=rna3638|organism=Nannochloropsis gaditana|type=polypeptide|length=604bp
MRRHPWRAQELSVLLLAFAALVTARQLMCRGPLSSTSSRRTHRGRLAFDY
PAYDTNPAQYASGGPPPPPPPPGGLYHAHPPPAQHQPHHQRSPERTGTPA
SGPGQYPPPPPPPPHHHQHQQAQQPPHPQDQWGGPGGYGQGGSPPPRQDG
PGAEGPGRYDQGQPVGGENYGAYYGSQGEHGYGAYYGVPPGQGGQGGART
EGPSVGEKLKGLWGSFKEKIASGVDSVSKSSTVENGLRYLARDYDQPGGG
SGGYYGGPVYDSQGGHQAPQSLPGGGAYGPPATHMHQSPQGAGSWSSPGR
DGSGPGARYGPPSSRGVPPPPPPPAYFPPGEKQPLSYPPPSRQPAYPPRE
AGSPRTPHGPGTPAEEDEPSQHRIVNEMQDRYRAQGRRGEEDEATRHGWP
TQPVPGPGPGPSGGRLGPGGPWGHPPPAQQPQAPQYQQREGQRPGQGGAK
APPYVHGVDDRPPYFSQQQQQAFARPPPSQHGGFPHSQQDYGPPPPTSHG
HGPPPPASSYPTPGPGHGAGTDAAPGTQQPQQAPQEEVQSQRPYPTLEEE
GEGEKGKGESVPPASSAAGSYQGKDSTERTRPTGSARTSPSEEVRTVWAL
DEEF
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mRNA from alignment at CM002461.1:860615..862429-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3638 ID=rna3638|Name=rna3638|organism=Nannochloropsis gaditana|type=mRNA|length=1815bp|location=Sequence derived from alignment at CM002461.1:860615..862429- (Nannochloropsis gaditana)
ATGAGAAGGCACCCATGGAGGGCCCAGGAGTTGTCAGTCCTCCTCCTGGC
GTTTGCCGCCCTGGTTACAGCTCGACAGTTGATGTGCAGAGGGCCCCTCT
CCTCGACGTCCTCTCGACGCACGCACCGAGGCAGGTTGGCCTTTGATTAC
CCTGCCTACGACACCAACCCTGCTCAGTATGCCAGCGGAGGGCCCCCTCC
TCCTCCCCCCCCGCCCGGAGGTCTCTATCATGCGCACCCTCCTCCCGCTC
AGCACCAGCCACACCATCAACGGTCACCGGAAAGGACAGGGACGCCCGCT
TCGGGTCCGGGGCAGTACCCTCCCCCGCCCCCTCCGCCGCCCCACCACCA
CCAGCACCAGCAAGCACAGCAGCCACCCCACCCGCAAGACCAGTGGGGCG
GGCCGGGGGGGTATGGGCAAGGGGGCTCACCGCCTCCTCGACAGGACGGA
CCCGGCGCCGAGGGGCCTGGCCGTTACGATCAAGGGCAGCCAGTGGGAGG
AGAAAACTACGGTGCTTACTACGGCAGCCAGGGTGAGCATGGGTATGGCG
CCTATTACGGCGTCCCGCCCGGGCAAGGAGGACAGGGAGGGGCCCGGACG
GAGGGACCGTCCGTGGGGGAGAAATTGAAAGGCTTGTGGGGTTCATTCAA
AGAGAAGATCGCCAGCGGCGTGGATTCCGTCTCGAAAAGCAGCACGGTGG
AGAACGGGCTCCGGTATCTTGCCCGGGACTACGACCAACCCGGCGGGGGC
AGCGGAGGGTACTACGGAGGCCCCGTCTACGACAGCCAGGGAGGACACCA
GGCTCCGCAGTCCTTGCCCGGGGGGGGCGCGTACGGACCTCCAGCGACGC
ACATGCACCAGTCCCCTCAGGGAGCAGGGTCCTGGTCGAGCCCGGGCAGG
GACGGGTCGGGGCCGGGGGCGCGCTATGGCCCTCCGTCCTCGCGTGGGGT
GCCTCCGCCGCCTCCACCGCCCGCGTATTTCCCTCCTGGAGAAAAACAGC
CCCTTTCGTACCCACCGCCGTCGCGCCAACCTGCATACCCCCCGCGGGAG
GCGGGCTCCCCCCGGACCCCGCACGGCCCCGGGACGCCGGCGGAGGAGGA
CGAACCCTCCCAGCACCGGATCGTCAACGAGATGCAAGACCGGTACCGGG
CGCAGGGCCGCCGGGGGGAGGAAGACGAGGCTACCCGCCACGGATGGCCG
ACACAGCCCGTGCCTGGACCGGGGCCGGGTCCGTCGGGTGGGAGGCTGGG
TCCCGGGGGCCCTTGGGGGCACCCCCCGCCCGCGCAGCAACCGCAGGCAC
CTCAGTACCAGCAGCGAGAAGGCCAGAGGCCAGGGCAGGGTGGGGCTAAA
GCCCCTCCGTACGTCCATGGTGTGGACGACCGACCTCCTTATTTCTCGCA
GCAGCAGCAACAAGCTTTTGCACGCCCCCCTCCCTCGCAGCACGGCGGGT
TCCCACACTCCCAGCAAGACTACGGACCCCCTCCTCCCACGTCGCACGGA
CATGGGCCGCCACCGCCTGCGTCCTCGTATCCCACCCCCGGCCCGGGACA
TGGCGCGGGGACCGACGCCGCGCCTGGCACGCAGCAGCCGCAACAAGCGC
CGCAGGAAGAGGTGCAGAGCCAGAGGCCGTACCCGACATTGGAGGAGGAA
GGGGAGGGCGAGAAGGGGAAGGGCGAGAGCGTGCCACCTGCCTCTTCGGC
GGCTGGTTCCTACCAAGGAAAGGACTCGACGGAGAGGACGAGACCGACGG
GGTCGGCCCGGACGAGTCCCAGTGAGGAGGTGAGGACCGTGTGGGCTCTC
GATGAGGAGTTCTGA
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Coding sequence (CDS) from alignment at CM002461.1:860615..862429-

>rna3638 ID=rna3638|Name=rna3638|organism=Nannochloropsis gaditana|type=CDS|length=1815bp|location=Sequence derived from alignment at CM002461.1:860615..862429- (Nannochloropsis gaditana)
ATGAGAAGGCACCCATGGAGGGCCCAGGAGTTGTCAGTCCTCCTCCTGGC
GTTTGCCGCCCTGGTTACAGCTCGACAGTTGATGTGCAGAGGGCCCCTCT
CCTCGACGTCCTCTCGACGCACGCACCGAGGCAGGTTGGCCTTTGATTAC
CCTGCCTACGACACCAACCCTGCTCAGTATGCCAGCGGAGGGCCCCCTCC
TCCTCCCCCCCCGCCCGGAGGTCTCTATCATGCGCACCCTCCTCCCGCTC
AGCACCAGCCACACCATCAACGGTCACCGGAAAGGACAGGGACGCCCGCT
TCGGGTCCGGGGCAGTACCCTCCCCCGCCCCCTCCGCCGCCCCACCACCA
CCAGCACCAGCAAGCACAGCAGCCACCCCACCCGCAAGACCAGTGGGGCG
GGCCGGGGGGGTATGGGCAAGGGGGCTCACCGCCTCCTCGACAGGACGGA
CCCGGCGCCGAGGGGCCTGGCCGTTACGATCAAGGGCAGCCAGTGGGAGG
AGAAAACTACGGTGCTTACTACGGCAGCCAGGGTGAGCATGGGTATGGCG
CCTATTACGGCGTCCCGCCCGGGCAAGGAGGACAGGGAGGGGCCCGGACG
GAGGGACCGTCCGTGGGGGAGAAATTGAAAGGCTTGTGGGGTTCATTCAA
AGAGAAGATCGCCAGCGGCGTGGATTCCGTCTCGAAAAGCAGCACGGTGG
AGAACGGGCTCCGGTATCTTGCCCGGGACTACGACCAACCCGGCGGGGGC
AGCGGAGGGTACTACGGAGGCCCCGTCTACGACAGCCAGGGAGGACACCA
GGCTCCGCAGTCCTTGCCCGGGGGGGGCGCGTACGGACCTCCAGCGACGC
ACATGCACCAGTCCCCTCAGGGAGCAGGGTCCTGGTCGAGCCCGGGCAGG
GACGGGTCGGGGCCGGGGGCGCGCTATGGCCCTCCGTCCTCGCGTGGGGT
GCCTCCGCCGCCTCCACCGCCCGCGTATTTCCCTCCTGGAGAAAAACAGC
CCCTTTCGTACCCACCGCCGTCGCGCCAACCTGCATACCCCCCGCGGGAG
GCGGGCTCCCCCCGGACCCCGCACGGCCCCGGGACGCCGGCGGAGGAGGA
CGAACCCTCCCAGCACCGGATCGTCAACGAGATGCAAGACCGGTACCGGG
CGCAGGGCCGCCGGGGGGAGGAAGACGAGGCTACCCGCCACGGATGGCCG
ACACAGCCCGTGCCTGGACCGGGGCCGGGTCCGTCGGGTGGGAGGCTGGG
TCCCGGGGGCCCTTGGGGGCACCCCCCGCCCGCGCAGCAACCGCAGGCAC
CTCAGTACCAGCAGCGAGAAGGCCAGAGGCCAGGGCAGGGTGGGGCTAAA
GCCCCTCCGTACGTCCATGGTGTGGACGACCGACCTCCTTATTTCTCGCA
GCAGCAGCAACAAGCTTTTGCACGCCCCCCTCCCTCGCAGCACGGCGGGT
TCCCACACTCCCAGCAAGACTACGGACCCCCTCCTCCCACGTCGCACGGA
CATGGGCCGCCACCGCCTGCGTCCTCGTATCCCACCCCCGGCCCGGGACA
TGGCGCGGGGACCGACGCCGCGCCTGGCACGCAGCAGCCGCAACAAGCGC
CGCAGGAAGAGGTGCAGAGCCAGAGGCCGTACCCGACATTGGAGGAGGAA
GGGGAGGGCGAGAAGGGGAAGGGCGAGAGCGTGCCACCTGCCTCTTCGGC
GGCTGGTTCCTACCAAGGAAAGGACTCGACGGAGAGGACGAGACCGACGG
GGTCGGCCCGGACGAGTCCCAGTGAGGAGGTGAGGACCGTGTGGGCTCTC
GATGAGGAGTTCTGA
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Synonyms
Publications