rna3637, rna3637 (mRNA) Nannochloropsis gaditana

Overview
Namerna3637
Unique Namerna3637
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2668
Alignment locationCM002461.1:859127..860151 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100056g19.10469.mrna
Orig protein idgnl|cribi|Naga_100056g19.10469
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:859127..860151 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100056g19gene3504Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3637rna3637-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27056.1cds3628Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3637 ID=rna3637|Name=rna3637|organism=Nannochloropsis gaditana|type=mRNA|length=2668bp
GGTATCAACTCGCTCTGCCAGCCCTGATGCGGAGAGAGCTGGGCGACGCA
TCTTGTCAATGTACGACGATAGCTCTACGCATTCAGCTGTCGAGTACTTT
TTTTAAATCCCTCATGTGTAATTTGCATCCCACTCAAACATGCTTCTAGA
TGGTCCCGTACCCCTGGTAAGCGAAATGCGATGTATTGTTTAACTGTATA
TGCTATAGAAACCGTAAAATGCAGTGAATATGAGCTATCCTAATGTTTGT
TGGCTATTTTAACAAAATACGCTTGGTTCCGTGAATTGATGCCTGCAAAT
TTTCTGTAAACATGCTTTCCTTGCCTAGGTTGACTAGCAAGCAAGTGCGG
TTTGTAGCCGTGACTGTGAAACTCTCAATTTTCTAAATTTCTTCTAAAAT
TTTCTAAAACATTTGCTCATTGTTACAGCTGGGGCCACGCAACTTTGGAA
GGGGATGGCGTTTGACGGGGAAGTTGCAACGAGACGGCGGGAGGGCAAGG
TACTGCCTCATTCTTCTGTCTGCACTCAATGTCATTCTAAACTCCAAACT
TCTCTCTGCTGGCATCCCATCATACCTGTTCCTCTTTGTCTCGGGTGCTA
TGTCTCAACAATTCACACTATTCGCGCTTTTTACCGCCGTCATCAAGAAG
AAGCTTGGTCGAACAAGCGCGAGAGAAAAGATCACAATGCTGTGCACAAT
GAAATGAAAAGCTATGATTATGTCGATGATTATAGCAATCGACATAACAT
CGATCAGAGTGCGGATACGCATGGTCCAGTTGATTTCGCACCTTTTGATT
CCGTGAACCGAGCTCCAATCACTGTCTGTATCTGGTGTTTGCGCCTTGCT
CAAGGAGCAGACGAAGCGTGCCACATACTTCGCTGCAAATCTCGGTCAAC
TTTACCTTCTACTGATTTAAAGCATCCGTCTGATGTTGGGTTTTGTAAAA
CTTGTCTTGAACGGTACTTTGAGAAAGCCGTCGTCGACAAATGGTGTCTA
GAAAGCGAGGAGGGCGGATGGACGTGCCTTATATGTAATAAAGTGCCATT
CCTAGAGCTGGCATGGGAAGAAGGGTGGGGCCTACCTCAATATCCTCAAG
ATTTGAGATTATCGGCGGAGATACAAGAACTATTGATAAAGATTTTTGCA
GAACCGCACCCGCGACGAACGACACCAGCGATTTTGTACCCGGATTTGGA
GCGGCAAGAAACCTCTGAAGGTCTTCGGCCGGCGACAACGGCCGCAAATG
GCTCTGAGTTGAATTCCGTACTATCGCCTAACTCTTCCTCTTCGTTGCGT
CTCCAGTCATGTGCGTCTGACCAGCAGAGAGGACGTCTCAGTGATGAGCG
CCGTGAAGTACCTCTCGCACCTGAACAGGAGCGCGAGCTTGTATCGTCTC
CTCTTGAGTTCCTATCTTCTCTCTCTGGATGCGAAAGTAATGATACCCTT
TTGGTGCTGATAGAACACACACAACAGGCTTTATCTCTCCTAAGGCGCCT
TTGGCAGGAAGCAGCAGTACAGGTAGCTGCTCGAGAGGACATGCTCGACA
TGGGCACGGAGTTGGTAGAGCAAATCCAATATGTTCGGAAAGGGTCTCAG
AAGGAGGGACAGAAAGAGTGCCGAACACTAATCGTGGAGAAAAGAACGAT
CAACGGAGTAAAGGGGTCGATGGGGCCTGCGGTGAGGGAGCTGGAACGAA
AAGAGGCCCGCGGCAATCGCGGTTGCAACGATAAGTGTAGGCATGAGGGA
AGCGCTATTTACACCAGGGGGGCAAATCAGGCAGAAAGAGAGGCCCAGGA
GGCCGTGCGGACGTCATTGACCGAGCTCCGGGTCCTGTTGCGACACATGC
AGTATCTAAGGGATCAGCACATGCCGGGTGTGTGCGACGACGCAACGATA
AATAGTGGAACACTGGAACTTCCGCAAAAGAGAAGCTGCACGGGTCTTGA
CAAAGCGAGCGGCAACGTGGAAAAATCATGCACGTTGTACACCAGAGTTT
CCCCGACACCGCACCCCTCCCACTCAGATTCATCTTCTGCCGTTCTTGAT
TACGAAATGGAACGATTGAAGAATTTGCAAGGGTGGCTTGTATCATCCCA
AGGCCTCCTTCGAAGCCTCCACACTCAAGTGTTGCATGTCTTGGCGAGAG
CCCATCCCCCGCCTCCTGAGGCTACGAAAAAGATCTATCCCCCGGCTGAG
GAAGAGCCACAACAGCTTTCACAGCTAGGGGAAGCGAAGGTACAGGTCAT
AGAACGCGAACAGAAAGAAGGAGATGTCTTTCAACGCCGGCTGAAGGCGT
CAGAGGCGTCTTTGAGGGAACTTGGTAAAGATCTAAGCGTCCGCCTTGAA
GACGTTGGATACGCAGTGTCAATTTTGTGCCAAATGAAGGAAGGATTGGG
CGAAAAGGGGGTTGGCGCAGATGCACATTAATGCTTCTTCACGGGGAACC
GCGACAAAGGGCGCCATGGCCATCTACCGTCCGATGGCTGGGATATGCGG
ACAGGAGGGACGAAAACTTGTCGTCAACGGGAGGGTGATATGATCTGTTA
TTATATTATTATCTATGCTACGTGGGAGCAGTGGGCTTGTTCATACGTCC
TAACAGAGATATGCATCAGCCAAAACGAAAATGAAAGCAAAGTATCAACA
ACTCTACAAACAAGCCCG
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protein sequence of rna3637

>rna3637-protein ID=rna3637-protein|Name=rna3637|organism=Nannochloropsis gaditana|type=polypeptide|length=317bp
MVGGGGEQREQGPGGEGGEVGQVGGHEEAEHAGRVQEGKCDEEEAGSVLD
APTDWNQVREEQESPGGEGSGGGEGEGEDAGEVGLGESCASDLQQDPLYL
QEVENQLESFWVEHMAAQQAAASGNAGGEDGGGRGQAEGSDLIYPQSSDP
ADYPSPYSVQGGSRHDVSAPTLSSQPSSYPESQHYGRYPPSEYALVPGDR
SHHQCLWARERLYGRRRAWGVGGRQARARPTKTTVILPAATTTPAPASTT
PVATTRTPRRKRSYILTVDHETLSVDHGMGRWGSESTEEGATDVVGPACA
HAGIWKCVRKGYRKVRK
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mRNA from alignment at CM002461.1:859127..860151-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3637 ID=rna3637|Name=rna3637|organism=Nannochloropsis gaditana|type=mRNA|length=1025bp|location=Sequence derived from alignment at CM002461.1:859127..860151- (Nannochloropsis gaditana)
ATGGTGGGGGGAGGAGGGGAACAAAGGGAGCAGGGCCCAGGGGGGGAGGG
AGGGGAGGTCGGGCAGGTAGGGGGCCACGAGGAGGCGGAGCACGCCGGGC
GCGTGCAGGAGGGGAAGTGTGACGAGGAGGAGGCAGGTAGCGTCTTGGAC
GCGCCGACGGACTGGAATCAGGTCAGAGAAGAGCAGGAGAGTCCGGGAGG
GGAGGGATCGGGGGGGGGGGAGGGGGAGGGGGAGGACGCGGGGGAAGTGG
GGCTGGGAGAATCCTGTGCGTCAGATCTGCAGCAGGACCCCCTCTACCTT
CAAGAAGTGGAAAATCAGCTCGAGTCCTTCTGGGTGGAACACATGGCAGC
GCAGCAAGCGGCAGCATCCGGGAATGCAGGCGGGGAGGACGGAGGCGGGC
GGGGACAGGCAGAGGGCAGTGATCTAATCTACCCGCAAAGCAGCGATCCT
GCAGACTACCCCAGCCCGTACTCGGTCCAGGGAGGGAGCAGACATGACGT
TTCCGCGCCCACTTTGTCGTCACAGCCGTCGTCTTACCCGGAATCGCAGC
ATTACGGACGCTACCCTCCCTCCGAATATGCCTTGGTGCCAGGGGATCGA
TCCCACCAGTCTCTCTCTAGCCCGCTCCCTCCCCCTTCTCCCTCCAATCC
CCCTCCTACGTCGGCGCCCACCGGCTCAGTCAATGTCTATGGGCCCGTGA
ACGTCTTTATGGGCGGCGCAGGGCATGGGGGGTCGGCGGGCGCCAAGCGA
GAGCGAGACCCACCAAGACCACCGTCATCCTTCCAGCAGCAACGACAACA
CCAGCACCAGCCTCCACCACCCCCGTCGCCACCACCCGCACCCCCAGACG
GAAACGGTCGTACATACTGACTGTCGATCATGAGACACTGAGTGTCGATC
ATGGCATGGGTAGATGGGGAAGCGAATCGACAGAGGAGGGAGCCACGGAC
GTTGTGGGGCCCGCGTGCGCCCATGCGGGCATTTGGAAATGTGTAAGAAA
GGGGTACCGGAAAGTCAGAAAATGA
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Coding sequence (CDS) from alignment at CM002461.1:859127..860151-

>rna3637 ID=rna3637|Name=rna3637|organism=Nannochloropsis gaditana|type=CDS|length=1908bp|location=Sequence derived from alignment at CM002461.1:859127..860151- (Nannochloropsis gaditana)
TCAATGTCTATGGGCCCGTGAACGTCTTTATGGGCGGCGCAGGGCATGGG
GGGTCGGCGGGCGCCAAGCGAGAGCGAGACCCACCAAGACCACCGTCATC
CTTCCAGCAGCAACGACAACACCAGCACCAGCCTCCACCACCCCCGTCGC
CACCACCCGCACCCCCAGACGGAAACGGTCGTACATACTGACTGTCGATC
ATGAGACACTGAGTGTCGATCATGGCATGGGTAGATGGGGAAGCGAATCG
ACAGAGGAGGGAGCCACGGACGTTGTGGGGCCCGCGTGCGCCCATGCGGG
CATTTGGAAATGTGTAAGAAAGGGGTACCGGAAAGTCAGAAAATGAATGG
TGGGGGGAGGAGGGGAACAAAGGGAGCAGGGCCCAGGGGGGGAGGGAGGG
GAGGTCGGGCAGGTAGGGGGCCACGAGGAGGCGGAGCACGCCGGGCGCGT
GCAGGAGGGGAAGTGTGACGAGGAGGAGGCAGGTAGCGTCTTGGACGCGC
CGACGGACTGGAATCAGGTCAGAGAAGAGCAGGAGAGTCCGGGAGGGGAG
GGATCGGGGGGGGGGGAGGGGGAGGGGGAGGACGCGGGGGAAGTGGGGCT
GGGAGAATCCTGTGCGTCAGATCTGCAGCAGGACCCCCTCTACCTTCAAG
AAGTGGAAAATCAGCTCGAGTCCTTCTGGGTGGAACACATGGCAGCGCAG
CAAGCGGCAGCATCCGGGAATGCAGGCGGGGAGGACGGAGGCGGGCGGGG
ACAGGCAGAGGGCAGTGATCTAATCTACCCGCAAAGCAGCGATCCTGCAG
ACTACCCCAGCCCGTACTCGGTCCAGGGAGGGAGCAGACATGACGTTTCC
GCGCCCACTTTGTCGTCACAGCCGTCGTCTTACCCGGAATCGCAGCATTA
CGGACGCTACCCTCCCTCCGAATATGCCTTGGTGCCAGGGGATCGATCCC
ACCATCAATGTCTATGGGCCCGTGAACGTCTTTATGGGCGGCGCAGGGCA
TGGGGGGTCGGCGGGCGCCAAGCGAGAGCGAGACCCACCAAGACCACCGT
CATCCTTCCAGCAGCAACGACAACACCAGCACCAGCCTCCACCACCCCCG
TCGCCACCACCCGCACCCCCAGACGGAAACGGTCGTACATACTGACTGTC
GATCATGAGACACTGAGTGTCGATCATGGCATGGGTAGATGGGGAAGCGA
ATCGACAGAGGAGGGAGCCACGGACGTTGTGGGGCCCGCGTGCGCCCATG
CGGGCATTTGGAAATGTGTAAGAAAGGGGTACCGGAAAGTCAGAAAATGA
ATGGTGGGGGGAGGAGGGGAACAAAGGGAGCAGGGCCCAGGGGGGGAGGG
AGGGGAGGTCGGGCAGGTAGGGGGCCACGAGGAGGCGGAGCACGCCGGGC
GCGTGCAGGAGGGGAAGTGTGACGAGGAGGAGGCAGGTAGCGTCTTGGAC
GCGCCGACGGACTGGAATCAGGTCAGAGAAGAGCAGGAGAGTCCGGGAGG
GGAGGGATCGGGGGGGGGGGAGGGGGAGGGGGAGGACGCGGGGGAAGTGG
GGCTGGGAGAATCCTGTGCGTCAGATCTGCAGCAGGACCCCCTCTACCTT
CAAGAAGTGGAAAATCAGCTCGAGTCCTTCTGGGTGGAACACATGGCAGC
GCAGCAAGCGGCAGCATCCGGGAATGCAGGCGGGGAGGACGGAGGCGGGC
GGGGACAGGCAGAGGGCAGTGATCTAATCTACCCGCAAAGCAGCGATCCT
GCAGACTACCCCAGCCCGTACTCGGTCCAGGGAGGGAGCAGACATGACGT
TTCCGCGCCCACTTTGTCGTCACAGCCGTCGTCTTACCCGGAATCGCAGC
ATTACGGACGCTACCCTCCCTCCGAATATGCCTTGGTGCCAGGGGATCGA
TCCCACCA
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Synonyms
Publications