rna3634, rna3634 (mRNA) Nannochloropsis gaditana

Overview
Namerna3634
Unique Namerna3634
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2344
Alignment locationCM002461.1:853573..853782 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100056g23.10459.mrna
Orig protein idgnl|cribi|Naga_100056g23.10459
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:853573..853782 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100056g23gene3501Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3634rna3634-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27046.1cds3625Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3634 ID=rna3634|Name=rna3634|organism=Nannochloropsis gaditana|type=mRNA|length=2344bp
TCCGTCGTCACGCCCGTCCAGGTTAGCACCCGCCCCACGCATCGTTCGAG
ATGACAAGGATACTGCTTGCATTCTCAAACTGGTCGCCGGGCTACCTGCT
GTTGCTTGCATGGGCGCTGTTGGCCTTACATCAAAACCATGCCTTTGTCA
GCAGAATCCCAAGGGAAGTGGGTGACATGCGGACTCGTTCAAGTGTGTCT
CGCAGAAGAAAGGAAACATGGAAGTATGCTCCTTTGCCGGCGGCCACCGC
CGGTATCACTTCAGGTAAGGAGTTTCATCCCTACTGTGTCCGTCTTGAGA
ATCGCACGGGCAATCCCAGATGTCTGCCCGGTCTGGTGGTTTTGAAGCTT
TAAATGGGAGAGTATGTGTGAGGTATCCGGCGGATTTGCAAGCGAAGAAA
GCCATGTATGAAACTCTCATTGTACTCATCTGATGGATGACGCGACTGAG
TTTTGTGTTGGCCGTGACAGTCATTTTCATCCCTGAGGCTTAATTTTAGA
AAGCCGTTACGGGAATGATGAGGCATAGTTAGCGCAACTTCGATGAAGAC
GCTGAAAAAATTCAGGGCAACAGTCGCGGGGGGGCATGATATCTGATACA
CCCTCACGATTAATCCTATCTTTGTTCGCATCGACAGTGCTGGAATCCAG
CATGGCAGCGACTGCTACAGCTGCCTCCATATCAACCATGCCTTTTCCCT
CTTCAACCCTCGGCTACGAGTTGAAGTCCGATTTTCCCACCCTCGACCAG
GACGCTTACCCTGGCAAGCCATTGGTCTACTTGGATAGCGCCGCGACCTC
GCAGAAGCCTCGGCAAGTCCTAGAGGCCATGGCCGCGTATTACGAGCAAA
GCAATGCCAACGTGCACAGGGGGGTGCATGCCCTGTCCATCAGGGCGACG
GACGCCTACGAAGCGGCCCGGGACAAGGTCCAGCACTTCGTCCACGCCGG
TGCCCGGGAGGAGATCGTTTTCACGCGCGGAGCCACCGAGGCCATCAACC
TGGTCGCCTACACCTGGGGCCTGCAGAACCTCAAGGAAGGGGACGAGATC
CTGCTGACGGTGATGGAGCACCACTCCAATCTCGTGCCTTGGCAACTGGT
GGCTGCCAAGACGGGGGCAGTCCTCAAGTTTGTCGGGCTCAACGACGCGG
AGGGCCTGGACATGGACCAGTTTTACGCCCTGCTTTCCCCCAAAACGAAG
TTGGTGGCATTTCCGCACGTCTCGAACACCCTGGGCTGCATTCTCCCGGC
CAAGGACATGGCGGCGGCGGCGCACAGGGTGGGTGCCGTGGTCCTCGTCG
ACGCTTGCCAGAGCGTCCCGCACATGAAGGTGGACGTGCAGGACTTGGAC
GTGGATTTCTTGGCCGCATCCAGCCACAAAATGTGTGGCCCGACAGGCGC
GGGTTTTCTCTACGGAAAGCTGGCCTTGTTGAAAGAAATGCCGCCTTGGC
AAGGAGGAGGGGAGATGATCGACGAAGTCTTTCTAGAATACTCCACCTAC
GCGGGGCCCCCGGCCCGGTTCGAGGCAGGCACTCCCCCGATCGCCGAGGT
GGTTGGGATGGGTGCGGCCTGCGACTACTTGACGAAAGTGGGGATGGAGG
CGGTGGAGGCACACGAGCAGGCCCTGGGGAAGTACCTGTACGAGAAACTG
GACGAGGTGGAGGGCTTGAGGATCTACGGGCCTCCGCCGGGAGAGAATGG
GAAGGGACGGGCGGCCCTCGCGGCGTTTAACACGGACCAGGTTCATGCCA
GCGACCTGGCCTTTTTTCTCGACCACGAGGGTGTCGCCATTCGCTCCGGC
CACCATTGCACGCAACCCTTGCATCGCATGCTGCACGCAAAGGGAAGCTT
GCGCGCCAGCTTGTACGTGTACAATACTAAGGAGGATGTGGACGTTTTCA
TCGCTAAATTGCGGGAAACGATGCACTTCTTTGGAAATTTTCAAGGGAGC
GGGGGAGGGAACGCGGCTGGGGCAGGTTTGTAAGGGGGAGGTTAAAATTG
GACGAAATGGAAGCAGGTGCAGCAAGTAACGAGAGCCATGGGAAGAGAGT
GATGGAAAGTAGCTCGAAAAGCAGGGTGGCGGGAAAAGATTGGGAAGAAG
ATTGCGTTTGAGGCAGTGGGCCTCAAAGATGCACGGAAGCGAAGCGGGGA
AGGGTGTTTCATAAGAAGAAGTAGGCCACGCACAAAACCTAACACTTATG
AAGGTTGTTTTGAGACATCACAGTCGGAACCTCGTGACGTCTGGTAGCCA
CCATATCCTCGCTCGTCCGAGGTGTTTTTGGAGACGACGTCCATCCTTCT
ATCGGGGAGAAGGTGGCAAAGGCTCATTTCCTTGCGCGCGTTCA
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protein sequence of rna3634

>rna3634-protein ID=rna3634-protein|Name=rna3634|organism=Nannochloropsis gaditana|type=polypeptide|length=69bp
MLDAHKEEQLDEGGNCAKHTINVTRSRHQEPYVVPRTVLCVRPMRSSLSS
LCYYHLREAVKGQSLSYRG
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mRNA from alignment at CM002461.1:853573..853782+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3634 ID=rna3634|Name=rna3634|organism=Nannochloropsis gaditana|type=mRNA|length=210bp|location=Sequence derived from alignment at CM002461.1:853573..853782+ (Nannochloropsis gaditana)
ATGCTAGATGCGCATAAGGAGGAACAATTAGATGAAGGGGGGAACTGCGC
CAAACATACCATCAATGTGACCCGCTCTCGGCATCAGGAACCTTATGTTG
TTCCTCGCACCGTGTTATGTGTTAGGCCAATGCGCTCTTCACTTTCGTCC
TTATGCTATTATCATCTGAGAGAAGCGGTGAAGGGGCAATCTCTGAGCTA
CAGAGGCTGA
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Coding sequence (CDS) from alignment at CM002461.1:853573..853782+

>rna3634 ID=rna3634|Name=rna3634|organism=Nannochloropsis gaditana|type=CDS|length=210bp|location=Sequence derived from alignment at CM002461.1:853573..853782+ (Nannochloropsis gaditana)
ATGCTAGATGCGCATAAGGAGGAACAATTAGATGAAGGGGGGAACTGCGC
CAAACATACCATCAATGTGACCCGCTCTCGGCATCAGGAACCTTATGTTG
TTCCTCGCACCGTGTTATGTGTTAGGCCAATGCGCTCTTCACTTTCGTCC
TTATGCTATTATCATCTGAGAGAAGCGGTGAAGGGGCAATCTCTGAGCTA
CAGAGGCTGA
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Synonyms
Publications