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Properties
| Property Name | Value |
|---|
| Product | pfkb-like carbohydrate kinase family protein |
| Orig transcript id | gnl|cribi|Naga_100056g31.10476.mrna |
| Orig protein id | gnl|cribi|Naga_100056g31.10476 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:838849..840162 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3627 ID=rna3627|Name=rna3627|organism=Nannochloropsis gaditana|type=mRNA|length=1423bp
ACCTGTGAAACAACAACTAGGCTAATGGCTAACGCCACTTTTGTGGCCGA
ACTGGAGGATGTATTACCTGTTCAAGGTCGGAAGCAGCCGCACTCCATGA
TTCGGGTGAAGCGCATCGTAAGCTTAGCTCACTCACAAGATGTAGCAGAT
CAGCAAAAGGCAGCAACGGATCTCAACACGCTAATAGGAGGAAATGCATT
CTTTCCGATGATCTCCTTCGCTCCCATGGCCCACGCATTGTGCCGATTGC
TACCAAGTCATGACCGAACTGTTGTCTACTTCGCGGCTCGCGCTGCCAAG
ACATTACTCCTTGACGACGCATTAAGAGGACAGGCTGTGCTTGTAGGCCT
ACCAGCGGTGCTTCTCCAGGCCTTACAAACCTGGCAAGAAGAAACACCTT
GTTTGAGGGAGATCTTGGGGTCACTGCAGACCCTTTCGTGGGATAAGCAC
ACTGTCAAAAGCCTCATTGCCTGCCTTGCTACTGAGTACGGGCAGAGCAC
GGGCAAGAATACGGAGCAAGCCGGCAGCCCGGGAAGTGAAAATGCACAAG
TTGATTCGATGGGCCTTATTCCATATCAACGAGGAGCTGTCCATACAAAA
CAGGACATAAGTAGCACCGAGGAGAGGGACGCTGGCCTGGCTCCGGCAGC
GCATATAACATCTACGCAGCCCATGATGGCCGCGACCACCGCAGTCACCC
TTCCCAGCGTAGGAAGGTTGGCATCGATCCTAGCCTTGCTCCAAACCAGG
GACTTGGAAGTGGTAACATTGTCCCTCGCCATTGTCGCTAACCTTTGCGC
CTACAGCGATACGTACCTTCTGACACATCAGGGATTTATCCATGCTGTGC
GGGACGTTCTTCCTCGTGTTTTGGAGGTCGCCCAAAACCAAAGCCGACTG
CTTCGTTGCTATGGAGTGGCAACATTGGCCAACGCCAGCGCCAACCCGGT
GCTGTTGGGCCGGATGAAAGAATTGGGCGGAGGGGCTGTCGTGGAGAAGA
TCGAGCAAGAAGACTTGAAGGCGAATACGGTGGCATTCGGAGGAACTCGC
GTGAGTGAATGTTGCGAGGTCGTCTTGCTGCGCCTCGCGGGTGGCAAACA
CGAAAGTCTTGGTGGAAGCGTTGCGAGCGGTAATCGGAATGACGATAAAC
TCCACGACGGCGGTGAGAGTGGCCGTGTGCTGCTCACCAAAAAGTTCAAG
TTCAAATACGGAAATACGCCCACCCTGGAGCTGACCTTGGATGGAAACCA
AAACCGAACAACCGTTGTGATATGCATTTTTTTGTGGGTGGTGTGTATTC
TCCTGTTCCTGCAGCCTATACTCAGACCACGCAAAACTGGTGGGCTCGGC
AACTGATCCGAAAGGTAGCTTGGAAAGTTATTGTATGATAAAGGAAGTAT
TCGTCAAAATCCGTCGCAAAATG back to topprotein sequence of rna3627 >rna3627-protein ID=rna3627-protein|Name=rna3627|organism=Nannochloropsis gaditana|type=polypeptide|length=396bp
MRRSLPAYLSYLLLLGPCCSPTVSFNLAPQFSIFKHLHPPLRTSTIKMSV
KPPKVLGMGITGVDLLAYVETYPAADAKIRTSDFKIQGGGNAGNTLTGLC
RLGVRTEILTKVGNDAYGSMILEEFAIDGLDTRHVIRKAGISSPFTYVIV
DMAGQTRTCLHTPSEDLTEDEINPAVLDGVDFLHLDGRNTLAAIRLAQLA
NARGIPVMLDAEKDRPHLRELVPLCDFLATNAVFPKAFTGAASTEEGMAR
LLDMGRARLVFTTLGAKGSMVMGLPSEMIGGKRGGDGNEKERREPRAGEA
LPLATETRSYACPSTGLALTLVRCDAWPVLPEDIVDTTGAGDAFIAGLIY
GLVHSLSVPHMLNLAGFVAAQKLQAPGARQGLPRRETLPARLQEEG back to topmRNA from alignment at CM002461.1:838849..840162+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3627 ID=rna3627|Name=rna3627|organism=Nannochloropsis gaditana|type=mRNA|length=1314bp|location=Sequence derived from alignment at CM002461.1:838849..840162+ (Nannochloropsis gaditana)
TTTACTATAATTATCACAGTTCTGGCCTCATTTCCTGCGtctacctcctt
cgcttATTCCACCATCACATGCGTCGGTCTCTCCCGGCATATTTGTCGTA
CTTACTATTGCTCGGCCCGTGTTGCTCCCCAACAGTAAGCTTCAATTTAG
CGCCTCAATTCTCCATCTTCAAGCACCTACACCCGCCATTGCGGACATCC
ACTATCAAAATGTCAGTAAAGCCTCCTAAAGTCTTGGGCATGGGCATCAC
CGGTGTTGACCTGCTGGCTTATGTGGAAACCTATCCAGCAGCGGATGCTA
AGATCCGAACGAGCGATTTCAAGATCCAAGGCGGGGGCAACGCCGGAAAT
ACTCTTACTGGACTCTGTCGCTTGGGCGTTCGCACCGAAATACTGACCAA
AGTAGGAAATGATGCTTACGGTTCTATGATTCTGGAAGAATTCGCCATTG
ACGGTCTCGACACCCGCCATGTAATCCGGAAGGCAGGCATCTCCTCGCCT
TTCACTTACGTGATTGTTGACATGGCCGGTCAAACCCGCACCTGCTTGCA
TACACCTTCAGAGGACTTAACAGAGGACGAGATCAACCCCGCTGTGTTGG
ATGGTGTAGATTTTCTTCACCTAGACGGACGCAATACGTTAGCCGCCATC
AGATTAGCGCAGCTGGCCAATGCCCGTGGGATCCCCGTGATGCTGGACGC
CGAGAAAGATCGGCCACATCTCAGGGAATTGGTGCCCTTGTGTGACTTTC
TTGCTACTAACGCCGTGTTCCCGAAGGCGTTTACGGGCGCCGCGAGCAca
gaggagggcatggccaGACTGCTGGACATGGGCCGCGCAAGACTTGTCTT
CACGACCTTGGGCGCAAAGGGCAGTATGGTGATGGGCCTGCCTAGCGAGA
TGAtaggggggaagcgaggcggagacggtAACGAAAAGGAGAGACGTGaa
ccgagggcgggagaggcgcTGCCGTTGGCGACGGAGACAAGGAGCTACGC
ATGCCCCTCGACGGGTTTGGCACTGACGCTCGTGAGATGTGACGCCTGGC
CCGTGCTTCCGGAAGACATCGTCGACACCACAGGGGCGGGAGACGCTTTC
ATCGCGGGGCTTATTTATGGCTTGGTGCACTCCTTGTCAGTGCCACACAT
GCTCAATCTGGCAGGGTTCGTGGCGGCGCAAAAGCTCCAGGCCCCGGGGG
CTAGACAAGGGTTGCCTCGACGGGAGACGCTTCCAGCCCGGCTTCAGGAA
GAGGGGTAAAATCGATCTCAATATGTGACATTGTCAAAAAGCAAAACGAC
GAGGAGTATGCATG back to topCoding sequence (CDS) from alignment at CM002461.1:838849..840162+ >rna3627 ID=rna3627|Name=rna3627|organism=Nannochloropsis gaditana|type=CDS|length=1191bp|location=Sequence derived from alignment at CM002461.1:838849..840162+ (Nannochloropsis gaditana)
ATGCGTCGGTCTCTCCCGGCATATTTGTCGTACTTACTATTGCTCGGCCC
GTGTTGCTCCCCAACAGTAAGCTTCAATTTAGCGCCTCAATTCTCCATCT
TCAAGCACCTACACCCGCCATTGCGGACATCCACTATCAAAATGTCAGTA
AAGCCTCCTAAAGTCTTGGGCATGGGCATCACCGGTGTTGACCTGCTGGC
TTATGTGGAAACCTATCCAGCAGCGGATGCTAAGATCCGAACGAGCGATT
TCAAGATCCAAGGCGGGGGCAACGCCGGAAATACTCTTACTGGACTCTGT
CGCTTGGGCGTTCGCACCGAAATACTGACCAAAGTAGGAAATGATGCTTA
CGGTTCTATGATTCTGGAAGAATTCGCCATTGACGGTCTCGACACCCGCC
ATGTAATCCGGAAGGCAGGCATCTCCTCGCCTTTCACTTACGTGATTGTT
GACATGGCCGGTCAAACCCGCACCTGCTTGCATACACCTTCAGAGGACTT
AACAGAGGACGAGATCAACCCCGCTGTGTTGGATGGTGTAGATTTTCTTC
ACCTAGACGGACGCAATACGTTAGCCGCCATCAGATTAGCGCAGCTGGCC
AATGCCCGTGGGATCCCCGTGATGCTGGACGCCGAGAAAGATCGGCCACA
TCTCAGGGAATTGGTGCCCTTGTGTGACTTTCTTGCTACTAACGCCGTGT
TCCCGAAGGCGTTTACGGGCGCCGCGAGCAcagaggagggcatggccaGA
CTGCTGGACATGGGCCGCGCAAGACTTGTCTTCACGACCTTGGGCGCAAA
GGGCAGTATGGTGATGGGCCTGCCTAGCGAGATGAtaggggggaagcgag
gcggagacggtAACGAAAAGGAGAGACGTGaaccgagggcgggagaggcg
cTGCCGTTGGCGACGGAGACAAGGAGCTACGCATGCCCCTCGACGGGTTT
GGCACTGACGCTCGTGAGATGTGACGCCTGGCCCGTGCTTCCGGAAGACA
TCGTCGACACCACAGGGGCGGGAGACGCTTTCATCGCGGGGCTTATTTAT
GGCTTGGTGCACTCCTTGTCAGTGCCACACATGCTCAATCTGGCAGGGTT
CGTGGCGGCGCAAAAGCTCCAGGCCCCGGGGGCTAGACAAGGGTTGCCTC
GACGGGAGACGCTTCCAGCCCGGCTTCAGGAAGAGGGGTAA back to top
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