rna362, rna362 (mRNA) Nannochloropsis gaditana

Overview
Namerna362
Unique Namerna362
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length3391
Alignment locationCM002455.1:881948..882399 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g134.1845.mrna
Orig protein idgnl|cribi|Naga_100003g134.1845
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:881948..882399 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100003g134gene349Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna362rna362-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30328.1cds362Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna362 ID=rna362|Name=rna362|organism=Nannochloropsis gaditana|type=mRNA|length=3391bp
CCTTGTTCCGTGCTTTACAACGTAGCTGCGTGTGGTACATGGTGCATGGT
TGCTCCCTGTCTACCAGGCACCATGCGCATTTTAATATATATTTATTTCA
CGTTTATATCTGCGTCTGGTCGTAGTATCAATGAAAAAGAGCTACCTATA
GACTACCATTCCGGGCGTTGCGTGGTGCGGCAGAACCCTGCATTTTGGGG
ACTCATCTGATGATATTGTTTCCTTGCCTCTCGTTGTTTTGTACTTGAGC
CGAGTAGAGAGAATTCTGACTATGCTAGTCAATGTAATCAAGCGTTATTT
ACAAAGAGGTGTATGGTTTTGGAAATAATATCCTCTTTGATTAGCCGTGA
GGTCGGTCGCACGTCGTGGATTGACCAACCTAACCTAGTACCTTGCGCCG
CGTCTCTCTGAGAAGCTTGGGGCTAAAATAGACAATCCCGGTAAAAGCTC
GTCAGTATTGTCTCCAAGGTTTGATGGAAATCAATCCATGAAATTCTTGA
TTACATTTTAATTTCCTCGAAAACATCTGTTTGCTCTTTCGTCGGCTGGG
AATGAAATTTTGTGTTACCAGTCCCAATAAATGGTGTTATTGTTTCAAGC
CAACTCATACGAATTCAATCTTGCATACTATCAACACAATAACAGTCAGC
AATTGGACCATGTGGCAGCATGATAGAGGGCGCCACGGTTCAGCTACAAA
AGGTAATTTCATATCGCTCGCTCGAGGTGACGAAAGTCAGGAATCAAGCG
ACCCGGACGAAGAAAATGTCTTCGATTTAGATGTAGATACCGACTCCAAC
AGCGGAAAAGACCTCTATGGAGGAACAGAGAGGGAGAAGGAGGCAATGGA
TGAGGAAGAAGAAGACGACGACGAGGAGGAGGAGGAGGGGGAGGAAGAGG
AGGAAGAGGAGGAAGAGGAAGAGGGTGGGAGTGGCGATGAGGACAGAGAT
GACCAGGAAGCAGAGCTCCAGGACGTGCGGCGATGGGGAAAGCATAAAAA
TCAGTACTACAGTGCGGATGCTGTAGATTTGGAAATAGGGCAGGATTTCG
AAGAGGCAGAAGAAGAGGAAGTTGCAGCGCGCGAGGTGGAGCAGGCGCGT
TATGATGAGGTGGAGGAGAATGATTATCTAGATGGCTGGAATACAGATAA
AAATATCCTGGTTCAAAAAAATAAATTCATGCGTCCTGAGATCGGGATGC
ATAGTATAACAAAGCCAAACACGCAGTCGATTACTAGTGGGCTGAGCTCG
TGGCAAGAGTCCATGATGGATCAAACCGAGATGGAGATGGCTCAGCTTGA
ACAGGGTTTGTTGACCACAAGCACAGCTGGAAAGCTGCGAATGCTTTCAA
CTAGCTCGCCAGAACTATTGACGTTGCTAGAGGATTTCAAGGACAAGCTG
AGCGAGCTACAGGATCGCGTGGAGCCATTGGCAGAGATGGCGCGAGATGG
AGCTTGTGCAGTGCGCCTGAATGAAGAGGGTGTGGCCTATTTAGAAGTGA
AGCAGCAGTTGCTTCTGAATTATTGTTTGAATTTGACCTATTATCTTCTC
CTGAAAGCTGAAGGCCGTGCTGTGAAAGATCATCCTGTCATTGCACAGCT
CGTAGAGCTTCGTGTCGCGCTGGAAAAGATGAGGCCCCTTGATGCAAAGC
TCAAATACCATCTTGACCGGCTTACGAAGGTCGCTTCTGTCGACGGATCC
TCTAGAATACACGATGACCCTCTCTCCTTTCGGCCAAACCCAGACCTGTT
GGTAGGAAAACGTGGTCAGGACCGAGTGGAGGATGGAAACGGGAAGGATC
TTGACAATACAGAGGGAAATGGCCACAGGGAGGTCTTGTATCGCCCTCCT
CGTCTTGCTGCTGTACCGTATGGGGAAAAAACGGGGGCTGATGGTGGACG
TGAGAGTAAAAATGAGGCTTTGGCACGCAAGAGACTTGAAAAACTGCGTC
GGTCAGAGCTGCTTCAGACCCTGACTGAGCAATACAGAGACAAGCCCGAA
TTGGTAGCAGAGCATAAATCGCTGGAAAACTCTGTTCAACAGAGAGCAGA
TTACGCAGAGGAGGAGCGGCGAATTTTCGAGGAGGAGCGCTTTACCCGCC
TAGTAACTTCCCGGAGGGACAAGAAGGCGCGGAGATTGGCGAATGAGCAA
GCGACGCGGCTAGAGACTATTGCTGATATCGGTGACTTCCATGAACTACA
TGCTTCTCTGAACGCTTTTCAAAACGGTGCTCAAAGCAAAGCATCGTACT
CAGCATCAAATAGTAACGACAGGGAAGTCAAACAAATGAGACAATTGCGG
GATAAGAAAGACATGAATGCACTTCAAAAGGCGGTGAATTCTATAGCTCA
AAAGGAGCAGATGACGAAACGCCAACGTAATAATGATCTTCATGGAGATA
TTGATTTGCCTCACCGCAATGAATGCGTCCGTAGGGTGCGCCGGGCAACG
GCGTCGATTGATGAAGAGAGAGGCGACATGATCAACTCGGCGAAAATTCC
CACCAATGCCAGACAAAAAGCAATACAGGTGCATCATGGCGATGCAGACG
AGCAAGTCACCGCGTCGTGTTTACCTCCGGAGCATCCTCTGTACAAGACC
GTGGCAACTTCCAAAAGCAAGCGCAAAGCTGAGAAGGCGGCTCTATACGC
AGTTGAGCCTCAATATGGGGCAGTAGAGGATGGGCTGACGGTCGGTGCGA
TGGGAGAGGGTGGGAAACGCGGAATCAATCATCAAATGCTTAAAAATCGC
GGGCTCACGGCCTACAAGAGTAAACTGAATCGCAATCCTCGTGTGAAGAA
GCGAGAGGCCTACCGTAAGGCTGTGATCAAGCGAAAAGGCCAGGTTCGGG
ACGTCCGGGAATCCGAAGCGGCCCATTATGGCGGTGAAGCAACAGGTATC
AATGCAAAAGTGATACGCGTGCGTGGAAAAGGGACATAGAAGAATGATTG
GCGACTGCCCTTCGTTTATGATATGATAGTTCTGAGTTGTTTTCTCACTG
ATGGAAGGGTCTTGCCTCGAGATTATTGAAGGTAATCAAAAACGAGCTAG
CACAGAGTAGGTTACGTGTCTCTTCGACCGCCCTGTGTACCATGAAAATT
CGATTTATCCTCTTCTCTATGATGAACTTTTCAAAACAAGGCAGAGATCA
GAAATGTTTTCCCTTTCTTGGAAACCTTAGGCCCCCACTTCGCCTCGAAA
TATTCACGACAAATCCAAAGATCTTGATGAAGCCGCGTAAATTGAACCTG
GGCCACATCTTTGAATTTTCGCGTTTCCCCGTTCTTGCTCTTCTCGGATG
AAATTTTGTTTTTCCCCATGTATCAAAGTCCTCTCACGGAGAAAACGAGA
AAAGTTCAAAGATTTCAGTGGTGCTGTACAGGAAGTTATGG
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protein sequence of rna362

>rna362-protein ID=rna362-protein|Name=rna362|organism=Nannochloropsis gaditana|type=polypeptide|length=117bp
MAVTRARVKNNMCSYWGATITSCTAPLKSLNFSRFLRERTLIHGEKQNFI
REEQERGNAKIQRCGPGSIYAASSRSLDLSINRIFMVHRAVEETRNLLCA
SSFLITFNNLEARPFHQ
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mRNA from alignment at CM002455.1:881948..882399-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna362 ID=rna362|Name=rna362|organism=Nannochloropsis gaditana|type=mRNA|length=452bp|location=Sequence derived from alignment at CM002455.1:881948..882399- (Nannochloropsis gaditana)
ATGGCAGTTACGAGGGCAAGGGTTAAAAACAATATGTGCTCGTACTGGGG
AGCTACCATAACTTCCTGTACAGCACCACTGAAATCTTTGAACTTTTCTC
GTTTTCTCCGTGAGAGGACTTTGATACATGGGGAAAAACAAAATTTCATC
CGAGAAGAGCAAGAACGGGGAAACGCGAAAATTCAAAGATGTGGCCCAGG
TTCAATTTACGCGGCTTCATCAAGATCTTTGGATTTGTCGTGAATATTTC
GAGGCGAAGTGGGGGCCTAAGGTTTCCAAGAAAGGGAAAACATTTCTGAT
CTCTGCCTTGTTTTGAAAAGTTCATCATAGAGAAGAGGATAAATCGAATT
TTCATGGTACACAGGGCGGTCGAAGAGACACGTAACCTACTCTGTGCTAG
CTCGTTTTTGATTACCTTCAATAATCTCGAGGCAAGACCCTTCCATCAGT
GA
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Coding sequence (CDS) from alignment at CM002455.1:881948..882399-

>rna362 ID=rna362|Name=rna362|organism=Nannochloropsis gaditana|type=CDS|length=708bp|location=Sequence derived from alignment at CM002455.1:881948..882399- (Nannochloropsis gaditana)
GATAAATCGAATTTTCATGGTACACAGGGCGGTCGAAGAGACACGTAACC
TACTCTGTGCTAGCTCGTTTTTGATTACCTTCAATAATCTCGAGGCAAGA
CCCTTCCATCAGTGAATGGCAGTTACGAGGGCAAGGGTTAAAAACAATAT
GTGCTCGTACTGGGGAGCTACCATAACTTCCTGTACAGCACCACTGAAAT
CTTTGAACTTTTCTCGTTTTCTCCGTGAGAGGACTTTGATACATGGGGAA
AAACAAAATTTCATCCGAGAAGAGCAAGAACGGGGAAACGCGAAAATTCA
AAGATGTGGCCCAGGTTCAATTTACGCGGCTTCATCAAGATCTTTGGATT
TGTCGATAAATCGAATTTTCATGGTACACAGGGCGGTCGAAGAGACACGT
AACCTACTCTGTGCTAGCTCGTTTTTGATTACCTTCAATAATCTCGAGGC
AAGACCCTTCCATCAGTGAATGGCAGTTACGAGGGCAAGGGTTAAAAACA
ATATGTGCTCGTACTGGGGAGCTACCATAACTTCCTGTACAGCACCACTG
AAATCTTTGAACTTTTCTCGTTTTCTCCGTGAGAGGACTTTGATACATGG
GGAAAAACAAAATTTCATCCGAGAAGAGCAAGAACGGGGAAACGCGAAAA
TTCAAAGATGTGGCCCAGGTTCAATTTACGCGGCTTCATCAAGATCTTTG
GATTTGTC
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Synonyms
Publications