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Properties
| Property Name | Value |
|---|
| Product | zeaxanthin epoxidase |
| Orig transcript id | gnl|cribi|Naga_100194g2.7128.mrna |
| Orig protein id | gnl|cribi|Naga_100194g2.7128 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:809265..812034 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3613 ID=rna3613|Name=rna3613|organism=Nannochloropsis gaditana|type=mRNA|length=1728bp
ATGCTCGGCCGTCCTGTCCTACTTTTGGCTGCACGGCAACGTCGTCCTTT
TTTAGCCTCCACGCGGGCTCTAGGCCTTGCTTCTACTTGGCACGCAAACT
CCCTTCGTCCAGGACTTCAGAACGAAGTAGCGAGTGCTGGTATTGCAAAT
CGACCTTTAATTGAAGTGTACGAAGCACTGGTAAATGAAGGGGCTTTGCG
CAGAGACGCAAAGCAACATCGAGTTGCCAGACGGCTTGATAAGCTCTCAC
GTCTCCTCGCTACCTATACTCCACCAATGAGCTTTAAACAAATGGATTCT
TCGCTGACCTTACCGTCAAGTTCATCATCGAGCGAAAAGAAAACGACGCC
CTCATCGACCGCTGTAGCGTCACCATCGTCCCCCACCGCACAGCACAAGG
TCCTCCGAGGCTTATACTTACACGGCGAAGTCGGCACGGGAAAGTCCTTG
CTGATGGACCTTTTTTTCCACCACTGCCCTTTGAAACGCAAGCGGCGGGT
GCATTTTCACTCATTTATGTTAGAAGTTCATGCTCGAATTCACGCTTGGA
AGCAGGAGGCGTTGCAGAGAGAAGGACGACAACGTCACGTGGACTTGCGG
CCTGAGCGCAACGCGATCACACAAATCGCACGGCAGATAGGGCAGGAGGC
CACGGTCCTGTGCTTCGACGAGTTTCAGGTGACGGACGTTGCGGATGCCA
TAATCATGAGCCGTCTATTTGCCGAACTCTGGCAGGGGAGCGGGGTGGTG
GTGGTGGCCACCTCGAATAGGCCCCCGGAAGACCTGTACTTGGGAGGCCT
GAATCGACCTTACTTCCTCCCCTTCATAGACCTGCTCAGGCGGCAGTGCC
GGGTGGAGTCCATGGAGTCGGAGAGGGATCACCGCCGAGGCTTTGCCTGG
CAGCAAGGGAAGTATTTCACCCCTACTGTCCACGAGGGGGTCTCAGAGGC
GAAGAGGAGAGTTGGAGAGGGGGAGAATGCGGGGGCCGGATCGAAGGGGG
GGAAGGAAGAAGAGAAAAAGGGAAGGATGGCAGAGGTGAAGGAGACTTTC
AAAGGCAGGAGGGAGGCGGCGAGGGCTTTGGACGCGGCTTTCCTGCGCCT
TAGTGGGGGACGCCGAGGGGGGCCATGCCAGGTCCCGGTGATGATGGGCC
GGACGCTCCGGGTCCCCGAGGCCTGCGGAGGCATCTGTCGCTTCAGTTTC
GAAGAGCTGTGCGCGACAGATGTGTTCGCCGCGGACTACCAGGCCCTGAG
CGGGTATTTCCACACGTTGGTGCTGGAGGGGGTGGCCTGTATGGGAGCGC
GGAGGGCGAACGAGGCCAGGCGCTTCATCACCCTTGTGGATGTCCTCTAC
GAGAGCAAGACTCGCCTTCTCATGTCGGCGGAGAGGCCCATCGGAAATTT
GTTTCTGGGGGAGGAGAGGAAGGAGGAAGGGAATACAGGCAGCGGTGGGG
TAGTTGGTGGCAGCGGCGTCCAGGTCGGCTCGGGGGCAGGGGGGGGGGGG
ACGAGGGACAGGGAGGGAGGAAGGGAATTGGAAGCAGGGGGCAAGGAAGG
GGCAGGGCGGGAACATGTGGATGCGGCTCAAGAGTTAATGGTCCCGGAGG
GGGAGCTGGCATCGGTGAAAGAGCTTTCCTTCGCCTTCCGCAGGGCTGCC
TCCCGCTTGAGAGAGATGGCGAGCCAGGAATACTGGAACGCGGGGGGAGA
GGGAAGGACGGGAGAAAGGGGGCCGTAG back to topprotein sequence of rna3613 >rna3613-protein ID=rna3613-protein|Name=rna3613|organism=Nannochloropsis gaditana|type=polypeptide|length=503bp
MFFFSQTFLGMVQRLATVAALLLPFTSAFLLPSSPLPRVPSYRSASTRTL
SMQYGSLREKPLKVIIAGGGIGGLVLANALQRHGIEYDLYEKTREYRPFG
GPIQVQSNALAALEAINKDMTERIMAAGTTTGNRVNGLKDGVTNKWYCQF
DTGAPAQKRGLPLTRVVDRPDLQSILLEYMDRSRLHTGVEVAEYTQLADG
SVDVTLTNGERVQGDVLVGADGIWSNIRGQMHSESPGKESATYSGYTCFT
GVCLARPHDVKEVAYKVYLASEKYFVCSDVGKGRMQWYAMLGQPSGKKVP
DGVQGAHLIKEYQGWSREVLELLEITKEEDINQRDLYDRPPLLLKGWAKG
PVAVLGDAAHPMMPNLGQGGCQAVEDGYRLAQELSKITDRGDVAWALRMY
ENQRLVRSSAVHGLARIASDVLFQSKLLFSNPVIGSFVGLMMTISMPLIL
EFLYQNVLDESDWGNAKGRLSNMAAYEDQSNTYKSVREAQQALASKERQL
QPN back to topmRNA from alignment at CM002461.1:809265..812034+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3613 ID=rna3613|Name=rna3613|organism=Nannochloropsis gaditana|type=mRNA|length=2770bp|location=Sequence derived from alignment at CM002461.1:809265..812034+ (Nannochloropsis gaditana)
GAGGCCTTGCCGGGCACAGAGGCAGATTAATTACAAAGCAAAATACAACT
TGAAGCGGTTTATTACATCGAGAAGCGACTTTCGGTGCCTCACGGCTCGA
CTGGCGTCGCAGGCACGCAGATCGTAGTCAGACCCCCCGCACAGAGGGAA
AAGCCGTCCTGCGCTTCGACATAGTTTTCTCCTTCCTAACCTAAGAATCA
CCACCCatgtttttcttttctcagACGTTTTTAGGTATGGTGCAACGTCT
GGCGACTGTCGCAGCTTTGCTCCTGCCCTTCACCTCAGGTATGACTCAGA
CGTAATGGATTTAGGtgaagagaagagaggcgTTGAGCTCGCCACCGTTT
TTTACGTGGAAATGCAACCCTTATAAGGCTTGTGGTAGTTGTAATCATTG
CCAGACCATCAATCTACATCGGAGTCCTCTGATAACCTTTCGCCGTAGTG
TATGATGATAGAGGAGGTGACTTTGCTGAATTTTTCGCAGGATCGAGAGA
AAGTGATGGAGGAAATGATGCATGTTGTTAGGGGTGTGCTCGCGCTTCGA
TCCCATACTAGCGAAGTTGATGCAATTGTTTTACCCGCGAGTCAAATAGC
AGTCGTTATCGCAATCCCCTCATGCCTTTCTCTCAACGCGATCTCCCCTG
GCATTCCCGGTcacagccttcctcctcccaagctctcccctccctcgcgt
cccttCCTaccgctcggcctccacgcgTACCCTCTCCATGCAGTATGGTA
GTCTGCGGGAGAAGCCTCTGAAGGTGATCATCGCCGGCGGCGGAATCGGT
GGCTTGGTCCTGGCGAACGCCTTGCAACGGCATGGCATTGAGTACGATTT
GTACGAGAAGACTCGAGAGTACCGTCCCTTCGGCGGCCCCATTCAGGTCC
AGAGCAACGCGCTCGCTGCCCTGGAGGCCATCAACAAAGATATGACGGAG
AGGATCATGGCGGCGGGGACCACGACGGGCAACCGCGTCAACGGCTTGAA
GGACGGCGTGACGAACAAGTGGTACTGCCAGTTCGACACCGGGGCCCCGG
CGCAGAAACGCGGCCTCCCCTTGACCCGAGTAGTCGACAGACCTGACCTG
CAGAGCATCCTGCTCGAGTACATGGACCGGAGCCGGCTGCAcacgggcgt
ggaggtggcggagtaCACGCAACTCGCGGACGGGTCGGTGGACGTGACGC
TGACgaacggggagagggtgcagGGCGACGTGttggtgggggcggacggg
ATCTGGTCCAACATCCGCGGCCAGATGCATTCGGAGAGtcccgggaagga
gagcgcgaCCTACTCGGGGTACACGTGCTTCACGGGCGTGTGCCTGGCGC
GCCCCCACGACGTGAAAGAGGTGGCCTACAAGGTCTATCTCGCCTCCGAG
AAGTACTTCGTCTGCTCGGACGTGGGGAAGGGCCGCATGCAGTGGTACGC
GATGCTGGGCCAGCCTTCTGGGAAGAAGGTGCCTGACGGAGTGCAAGGGG
CCCACTTGATCAAGGAATATCAGGGGTGGAGccgggaggtgctggagctg
ctggagatcaccaaggaggaggatatcAACCAGCGAGACCTCTACGACCG
ACCGCCCTTGCTGCTTAAGGGGTGGGCGAAGGGCCCCGTGGCTGTGTTGG
GCGACGCGGCGCACCCCATGATGCCCAACCTGGGGCAAGGGGGCTgccag
gcggtggaggacggctaCCGGCTGGCGCAGGAGCTGAGCAAGATCACCGA
CCGGGGGGACGTGGCATGGGCCCTGCGCATGTACGAAAACCAGCGTCTGG
TCCGGTCTTCTGCTGTCCACGGCCTCGCACGCATTGCCTCGGACGTGCTC
TTCCAGTCCAAGCTCTTGTTCAGCAATCCTGTCATCGGCAGCTTCGTCGG
CCTCATGATGACCATCTCCATGCCCCTCATCCTCGAGTTCCTCTACCAGA
ACGTGCTGGACGAGTCGGACTGGGGCAACGCCAAGGGCCGGCTCTCCAAC
ATGGCGGCCTACGAGGACCAGAGCAACACTTATAAATCTGTGCGAGAAGC
GCAGCAGGCTCTGGCCTCGAAGGAGCGACAGTTGCAACCCAACTGAGGCA
TGCGGGCCGGCACGGTAAGGAGGAACAAAACAGCGAAACAACGAGACCAG
AGCAGCGGTCATGACGGTTATGGAGCGATAAAATAGGCGAGAGACAGCGG
GCGCGACGTGGACTCTTCGCTCTGTTGTACAGTAGAGGGGACGCCAGGCA
GGCGCTGCGACCGGGGTTAAATCTGCAGGCATAAAGTGGTCGAGCGAAGC
GGGTAGAGCACAGACGTGGCCCCAAACCAGGGGGTCCTGCATAGCGCGCC
TCTAAGATGGTTGATGTTGTTCTTTTTAAATTTTCTTTGGCAAGACCCGG
GGTAACATTGAGATAGTATATACTGCCTCGCACGACCGTCTAGTCATGCG
GTGGggtttcttttctttttttccagtCCATTCGATTTGAGTTCCTGTTT
TTAGGACCCTGAAAGAGAGGCTGTGCGTGGGCGCATGAATGGCCTCTTCT
CTTTAGCTAATTTGTTCGAAAGATATTAAGAAAGGTATTGAAGAGGAGCT
ACTGCAATTACAGCAGTAGCTCCTCTTCAATATGCAGCATACGCCCCAGA
CATTGCTCtacaaagaagaagaacagtCAGAAATGTGACGATGCAGGAGT
CGGGTACCGTTTATGAAGTTCTTGTACAAAGTGTTCTTTTGGTTAAGACG
TTTCATTTCAGTGACTATCT back to topCoding sequence (CDS) from alignment at CM002461.1:809265..812034+ >rna3613 ID=rna3613|Name=rna3613|organism=Nannochloropsis gaditana|type=CDS|length=3024bp|location=Sequence derived from alignment at CM002461.1:809265..812034+ (Nannochloropsis gaditana)
atgtttttcttttctcagACGTTTTTAGGTATGGTGCAACGTCTGGCGAC
TGTCGCAGCTTTGCTCCTGCCCTTCACCTCAGccttcctcctcccaagct
ctcccctccctcgcgtcccttCCTaccgctcggcctccacgcgTACCCTC
TCCATGCAGTATGGTAGTCTGCGGGAGAAGCCTCTGAAGGTGATCATCGC
CGGCGGCGGAATCGGTGGCTTGGTCCTGGCGAACGCCTTGCAACGGCATG
GCATTGAGTACGATTTGTACGAGAAGACTCGAGAGTACCGTCCCTTCGGC
GGCCCCATTCAGGTCCAGAGCAACGCGCTCGCTGCCCTGGAGGCCATCAA
CAAAGATATGACGGAGAGGATCATGGCGGCGGGGACCACGACGGGCAACC
GCGTCAACGGCTTGAAGGACGGCGTGACGAACAAGTGGTACTGCCAGTTC
GACACCGGGGCCCCGGCGCAGAAACGCGGCCTCCCCTTGACCCGAGTAGT
CGACAGACCTGACCTGCAGAGCATCCTGCTCGAGTACATGGACCGGAGCC
GGCTGCAcacgggcgtggaggtggcggagtaCACGCAACTCGCGGACGGG
TCGGTGGACGTGACGCTGACgaacggggagagggtgcagGGCGACGTGtt
ggtgggggcggacgggATCTGGTCCAACATCCGCGGCCAGATGCATTCGG
AGAGtcccgggaaggagagcgcgaCCTACTCGGGGTACACGTGCTTCACG
GGCGTGTGCCTGGCGCGCCCCCACGACGTGAAAGAGGTGGCCTACAAGGT
CTATCTCGCCTCCGAGAAGTACTTCGTCTGCTCGGACGTGGGGAAGGGCC
GCATGCAGTGGTACGCGATGCTGGGCCAGCCTTCTGGGAAGAAGGTGCCT
GACGGAGTGCAAGGGGCCCACTTGATCAAGGAATATCAGGGGTGGAGccg
ggaggtgctggagctgctggagatcaccaaggaggaggatatcAACCAGC
GAGACCTCTACGACCGACCGCCCTTGCTGCTTAAGGGGTGGGCGAAGGGC
CCCGTGGCTGTGTTGGGCGACGCGGCGCACCCCATGATGCCCAACCTGGG
GCAAGGGGGCTgccaggcggtggaggacggctaCCGGCTGGCGCAGGAGC
TGAGCAAGATCACCGACCGGGGGGACGTGGCATGGGCCCTGCGCATGTAC
GAAAACCAGCGTCTGGTCCGGTCTTCTGCTGTCCACGGCCTCGCACGCAT
TGCCTCGGACGTGCTCTTCCAGTCCAAGCTCTTGTTCAGCAATCCTGTCA
TCGGCAGCTTCGTCGGCCTCATGATGACCATCTCCATGCCCCTCATCCTC
GAGTTCCTCTACCAGAACGTGCTGGACGAGTCGGACTGGGGCAACGCCAA
GGGCCGGCTCTCCAACATGGCGGCCTACGAGGACCAGAGCAACACTTATA
AATCTGTGCGAGAAGCGCAGCAGGCTCTGGCCTCGAAGGAGCGACAGTTG
CAACCCAACTGAatgtttttcttttctcagACGTTTTTAGGTATGGTGCA
ACGTCTGGCGACTGTCGCAGCTTTGCTCCTGCCCTTCACCTCAGccttcc
tcctcccaagctctcccctccctcgcgtcccttCCTaccgctcggcctcc
acgcgTACCCTCTCCATGCAGTATGGTAGTCTGCGGGAGAAGCCTCTGAA
GGTGATCATCGCCGGCGGCGGAATCGGTGGCTTGGTCCTGGCGAACGCCT
TGCAACGGCATGGCATTGAGTACGATTTGTACGAGAAGACTCGAGAGTAC
CGTCCCTTCGGCGGCCCCATTCAGGTCCAGAGCAACGCGCTCGCTGCCCT
GGAGGCCATCAACAAAGATATGACGGAGAGGATCATGGCGGCGGGGACCA
CGACGGGCAACCGCGTCAACGGCTTGAAGGACGGCGTGACGAACAAGTGG
TACTGCCAGTTCGACACCGGGGCCCCGGCGCAGAAACGCGGCCTCCCCTT
GACCCGAGTAGTCGACAGACCTGACCTGCAGAGCATCCTGCTCGAGTACA
TGGACCGGAGCCGGCTGCAcacgggcgtggaggtggcggagtaCACGCAA
CTCGCGGACGGGTCGGTGGACGTGACGCTGACgaacggggagagggtgca
gGGCGACGTGttggtgggggcggacgggATCTGGTCCAACATCCGCGGCC
AGATGCATTCGGAGAGtcccgggaaggagagcgcgaCCTACTCGGGGTAC
ACGTGCTTCACGGGCGTGTGCCTGGCGCGCCCCCACGACGTGAAAGAGGT
GGCCTACAAGGTCTATCTCGCCTCCGAGAAGTACTTCGTCTGCTCGGACG
TGGGGAAGGGCCGCATGCAGTGGTACGCGATGCTGGGCCAGCCTTCTGGG
AAGAAGGTGCCTGACGGAGTGCAAGGGGCCCACTTGATCAAGGAATATCA
GGGGTGGAGccgggaggtgctggagctgctggagatcaccaaggaggagg
atatcAACCAGCGAGACCTCTACGACCGACCGCCCTTGCTGCTTAAGGGG
TGGGCGAAGGGCCCCGTGGCTGTGTTGGGCGACGCGGCGCACCCCATGAT
GCCCAACCTGGGGCAAGGGGGCTgccaggcggtggaggacggctaCCGGC
TGGCGCAGGAGCTGAGCAAGATCACCGACCGGGGGGACGTGGCATGGGCC
CTGCGCATGTACGAAAACCAGCGTCTGGTCCGGTCTTCTGCTGTCCACGG
CCTCGCACGCATTGCCTCGGACGTGCTCTTCCAGTCCAAGCTCTTGTTCA
GCAATCCTGTCATCGGCAGCTTCGTCGGCCTCATGATGACCATCTCCATG
CCCCTCATCCTCGAGTTCCTCTACCAGAACGTGCTGGACGAGTCGGACTG
GGGCAACGCCAAGGGCCGGCTCTCCAACATGGCGGCCTACGAGGACCAGA
GCAACACTTATAAATCTGTGCGAGAAGCGCAGCAGGCTCTGGCCTCGAAG
GAGCGACAGTTGCAACCCAACTGA back to top
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