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Properties
| Property Name | Value |
|---|
| Product | nad dependent steroid dehydrogenase-like protein |
| Orig transcript id | gnl|cribi|Naga_100046g20.5158.mrna |
| Orig protein id | gnl|cribi|Naga_100046g20.5158 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:735194..736777 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3574 ID=rna3574|Name=rna3574|organism=Nannochloropsis gaditana|type=mRNA|length=2382bp
CACCTCCTCAACCTCATACGTCGAGTACGCTCGTATGTGTTTGGTTTATG
GCGCTAAGTGACCTCGTAAAAAGTATCTTCGCCCTGCCCCGGGCCACACG
AGCCTCGAGCAGGAGGTCGATGATCTACAACAGACAGTATTTGCACTTTT
CATCACCCGCCCATGATCCAACATTCTGTGAAGCCACGTAAAAACATGTT
GTGAGGTGTTACAAAACCTTTTGTACAACCACTATGCAAAAAAGGCGATG
GTGGACATCCTTTTTGGAGGCTCGGTTTGCGCCGGCGTTTTTTTGGTTTC
TTTTCTGTTCTGTTGCCCGAAAATTTGGCCATAAACCCACTTGCAACCAT
CTCCGCGAGGAAATCTTTCGGGTATACTTTTAAGTATGAGCGTATGTTGC
ACATGTGATGCTCAATTTTACAGCCATGTACCTATCCTATTGCGAGTTTA
AGTCATACCCATTTTTGCCCTCCCACATGCAGCATCATGCACGGCCCACC
TTCAGGTCGTGCTTGCCTCTGCCTCGTTGTTCTTTACTTGATAGGAACCT
CTTTGGCCATCCCTGACGCTCCCTTTCCAGGGGCACCAGCTGAGAGTGCT
CCAAGTACTGGCACAAGCACGTCTAATATTCGTGGGGCTCCTTTTCAGTC
ATCGCAAACCTCACCCCAAGACGTCGGTTGGACCTGGCCGTCTTGGGGAG
ACCCTTGGGGCACCGGAGGAAGCACCGCACAACCAACGTCCATCAACTAC
TCAAATTATACACGCCAGCATGGTACGTCTACGACGTCGGCCAGCGAATT
TCCGGCTTGCTCCATCCAGGCCGCCTTGAACGAGGATGGTCTAATCTGCC
TGGCGGGCTCCTTGTGGCTGGCCTTGACTCAAACCCTGCCTCCACAACTG
GGCTGGGGATCGAAAATCCGCCCCCCCGTCGATCCGCTGAGGGAGCTTCC
ACAACCTCTTGAAGTCCTGAGCATGCCTCTGCCCGCCCTGGTGCCCACGG
AGAAGGTAGAGGCCGAGAAGCCCACCTACTACTTCCTTTACCGGGCTATC
CAGAACCTCTACGCCGCTGTAGGCGCGAACGCTCGAAGTCGAGGCACCGA
CTCGGCGCAGGAGCCTATGCTGAACTTGGCCCTGCCTCCCGCGTGGACGA
ATCAACGGGAGTACACGCTGCGATGGACCGGGAGCCTGGTCGCCGGCGTG
TTGCAACCGCAGGCCCCCTTCGCCGTGAGCTTTACCCGCGACAAGGAGAT
GCTGGTGGTGGTACGTGGAACGATTTACAGCGCGGAGTGGCAGCGAAATT
TCCAGTACCAACACGCCGACCCCACGGAGACGGCTGCGTACAGGATGCCG
GGAGGCGTGCACGCGGGCTTCTTCGCCGTCTTCAAGGACCTAGCCGAGGC
CCTGGTCGACGACGAGATCAAGAGACAGGCACCCAGTAAAGTCACATTCA
CCGGACACTCCCTCGGGGGCTCCGTGGGCGCCCTCCTAGCCTTCTACACG
ACCCACGTCCTCCCCCGGACCCAGGTCGAGCTGGTGAGCTTCGGCGCCCC
CAACGTGGGCGACGCGACGTTCTCGTCGGCCTTCAATGCACGGGTCCGCA
ACCGGCATTTGGCCTTTTCGGGCGTGGGCAGTGAGGGAGACTCGTATTTC
ATCGGGGACTGGATCAGCCAAGTGCCGTGCGGGGCCGTCACGACCTGTCC
GCTCCTCACGGAAATGAGCTCCGTCGACCTGAATGGCTCGCCTAGCGGGC
AAAGACAGGCAAACGAATCCTATTCTTACACGGCACTAGGTGGTTCTGTG
CCTTTTACACCGGCCCAGATGCAGAATGGTCGGACTTGGGCACTCCGATC
CGACGTGGCGGGCTTCCGTTACTCCCCCGTGGCGGCCCATACATGCAGCT
ACATGTGCTTCACGGCGCCGTCGGTGGGGGATGCTTATGATCAATGCGTC
TTCACGCTCGAGCTCGGGAGCTCTGTGGACATGGACAAGCGGTGTGCCAT
CAATTTGTAGGGGAAGGGAAGGAGGAGGAGAGGGCGTGCGTGTCAAGCAA
TCGGTACGGGGTGACGGGGAAGCAGTTTGTAGAAAGGGTGCTGTGGGTAA
AGGAATTGAGAATACAAAGCTTTGTGGTATGAAAGAACTGTATATGGGAT
GCTGTGTGAATAATGGAACATGAAGGGGTTTAGCATGATGCCGGCTCAAA
ACAACTTTGCAAACGGGTGGGGTGTCGGGGAAAACGAATGAGGGGAATGG
CGGAGGCGGCGGCATGACAGACGCAGGTCATGAGAGAGTTAAGCAAGATG
GGTTTGAGGCCTTATCAGCAGAGCGATCCGAATGTTGCAAGGTCACGCAT
AAAAGAATAAAATTTACCGTGTGGGACGTCCG back to topprotein sequence of rna3574 >rna3574-protein ID=rna3574-protein|Name=rna3574|organism=Nannochloropsis gaditana|type=polypeptide|length=496bp
MTADDSSFLTPPHAVTIGVVAACLLAIIFIKAKSSSTSTTLDSKAPVPVL
VEVPDAVLNRRFKYDLPNRALVTGGNGFVGRRIVAMLLEQGCDVTVFDIT
KGFEDEPRVKMVVGNLVETADVAKAVEGIEVVYHVAAPHASHPPAVQFAV
NVTGTRALLQASAAAGVKKFVFTSSASVVYEGGNQAGVDESTPIPTASLD
SYTKTKAEAEALVLAANGQHGMHTAAIRPHGIFGPGDRQFFPVLVESARK
GKTKYALGEGRNVADFTFVGNVAHAHLLAAEKLGKVPGVDGQAFFVTNDA
PVPFWDFLAQVLTGFGYPAPSVRLPAGLMTVVGGWMDGMATLLRMVGVRF
QPTFTRSRVQYLTTHHYYSIEKAKRLLGYAPAWSQEEALALCFQCMMPAL
ANPRAPKPRRVTVKKGQSVPVYRMQQVSRHNTRGDAWIVVDGKVYDVTEY
VDVHPGDDAILRFVGGDSSKGFHGPQHPVSVWDVIAEYEIGAVAAE back to topmRNA from alignment at CM002461.1:735194..736777- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3574 ID=rna3574|Name=rna3574|organism=Nannochloropsis gaditana|type=mRNA|length=1584bp|location=Sequence derived from alignment at CM002461.1:735194..736777- (Nannochloropsis gaditana)
ATGACAGCCGACGACTCCTCCTTCCTGACACCGCCACATGCGGTCACGAT
AGGTGTCGTCGCAGCGTGCCTGCTTGCAATTATATTCATTAAAGCTAAGG
TAAATCTCACTAGTTAAAATAAGTAATAGAGAGGTCAATATTCTGCTTCT
AAACAAATCTCTGTCACCTGTTCCTCGCCATCACACGCCCAGTCGTCATC
CACTTCGACGACGCTTGACTCGAAGGCACCCGTGCCTGTCCTTGTCGAAG
TCCCGGATGCAGTCCTGAATCGCCGTTTTAAGTACGATCTTCCCAATAGG
GCTTTGGTGACGGGGGGAAACGGTTTTGTCGGACGCCGTATTGTTGCAAT
GCTCTTGGAACAGGGGTGTGATGTGACCGTATTCGACATCACCAAGGGGT
TCGAAGACGAACCTCGCGTCAAAATGGTAGTCGGGAACCTGGTAGAAACC
GCAGATGTCGCGAAGGCCGTAGAAGGGATCGAAGTGGTCTATCACGTAGC
AGCACCGCATGCCTCCCACCCCCCCGCGGTGCAGTTTGCGGTCAATGTCA
CCGGGACCCGGGCCCTGCTCCAGGCATCCGCAGCCGCGGGCGTGAAAAAG
TTTGTCTTCACGTCCTCGGCTAGCGTCGTGTACGAGGGGGGAAATCAGGC
GGGTGTGGACGAGAGCACGCCCATCCCTACGGCCAGTCTGGACTCCTATA
CAAAGACGAAGGCGGAAGCCGAGGCCCTGGTCCTGGCGGCGAACGGGCAG
CACGGCATGCACACGGCGGCCATTCGGCCCCACGGGATATTCGGACCGGG
TGACAGGCAGTTCTTCCCGGTGTTGGTGGAAAGCGCTCGAAAGGGCAAGA
CCAAGTACGCCCTGGGCGAGGGCAGGAATGTGGCTGACTTTACATTCGTA
GGGAATGTGGCTCACGCGCATTTGCTGGCGGCGGAGAAGCTCGGCAAGGT
GCCGGGAGTGGACGGACAGGCCTTTTTTGTCACGAACGACGCGCCCGTGC
CCTTCTGGGATTTCTTGGCACAAGTGCTGACAGGATTTGGATACCCGGCG
CCCAGTGTCCGCCTGCCCGCGGGGCTCATGACCGTCGTGGGAGGCTGGAT
GGATGGCATGGCGACCCTCCTGCGCATGGTGGGCGTGAGATTTCAGCCTA
CTTTCACAAGATCGAGGGTGCAGTACTTGACGACGCATCACTACTACAGC
ATCGAGAAGGCGAAGCGCCTGCTGGGCTATGCGCCTGCCTGGTCGCAGGA
GGAGGCGCTGGCCCTATGCTTCCAATGCATGATGCCCGCCCTCGCAAACC
CCCGGGCGCCCAAGCCTCGCCGAGTGACGGTGAAGAAAGGGCAGAGCGTG
CCCGTCTATAGGATGCAGCAGGTGTCTCGGCACAACACCCGCGGGGACGC
CTGGATCGTGGTGGACGGCAAGGTCTATGATGTGACCGAGTACGTGGACG
TACATCCTGGGGACGACGCTATCCTGCGCTTCGTGGGGGGGGACTCGAGC
AAAGGCTTCCACGGACCGCAGCACCCCGTCTCTGTTTGGGACGTGATCGC
AGAGTACGAGATAGGGGCCGTGGCGGCCGAATGA back to topCoding sequence (CDS) from alignment at CM002461.1:735194..736777- >rna3574 ID=rna3574|Name=rna3574|organism=Nannochloropsis gaditana|type=CDS|length=2982bp|location=Sequence derived from alignment at CM002461.1:735194..736777- (Nannochloropsis gaditana)
TCGTCATCCACTTCGACGACGCTTGACTCGAAGGCACCCGTGCCTGTCCT
TGTCGAAGTCCCGGATGCAGTCCTGAATCGCCGTTTTAAGTACGATCTTC
CCAATAGGGCTTTGGTGACGGGGGGAAACGGTTTTGTCGGACGCCGTATT
GTTGCAATGCTCTTGGAACAGGGGTGTGATGTGACCGTATTCGACATCAC
CAAGGGGTTCGAAGACGAACCTCGCGTCAAAATGGTAGTCGGGAACCTGG
TAGAAACCGCAGATGTCGCGAAGGCCGTAGAAGGGATCGAAGTGGTCTAT
CACGTAGCAGCACCGCATGCCTCCCACCCCCCCGCGGTGCAGTTTGCGGT
CAATGTCACCGGGACCCGGGCCCTGCTCCAGGCATCCGCAGCCGCGGGCG
TGAAAAAGTTTGTCTTCACGTCCTCGGCTAGCGTCGTGTACGAGGGGGGA
AATCAGGCGGGTGTGGACGAGAGCACGCCCATCCCTACGGCCAGTCTGGA
CTCCTATACAAAGACGAAGGCGGAAGCCGAGGCCCTGGTCCTGGCGGCGA
ACGGGCAGCACGGCATGCACACGGCGGCCATTCGGCCCCACGGGATATTC
GGACCGGGTGACAGGCAGTTCTTCCCGGTGTTGGTGGAAAGCGCTCGAAA
GGGCAAGACCAAGTACGCCCTGGGCGAGGGCAGGAATGTGGCTGACTTTA
CATTCGTAGGGAATGTGGCTCACGCGCATTTGCTGGCGGCGGAGAAGCTC
GGCAAGGTGCCGGGAGTGGACGGACAGGCCTTTTTTGTCACGAACGACGC
GCCCGTGCCCTTCTGGGATTTCTTGGCACAAGTGCTGACAGGATTTGGAT
ACCCGGCGCCCAGTGTCCGCCTGCCCGCGGGGCTCATGACCGTCGTGGGA
GGCTGGATGGATGGCATGGCGACCCTCCTGCGCATGGTGGGCGTGAGATT
TCAGCCTACTTTCACAAGATCGAGGGTGCAGTACTTGACGACGCATCACT
ACTACAGCATCGAGAAGGCGAAGCGCCTGCTGGGCTATGCGCCTGCCTGG
TCGCAGGAGGAGGCGCTGGCCCTATGCTTCCAATGCATGATGCCCGCCCT
CGCAAACCCCCGGGCGCCCAAGCCTCGCCGAGTGACGGTGAAGAAAGGGC
AGAGCGTGCCCGTCTATAGGATGCAGCAGGTGTCTCGGCACAACACCCGC
GGGGACGCCTGGATCGTGGTGGACGGCAAGGTCTATGATGTGACCGAGTA
CGTGGACGTACATCCTGGGGACGACGCTATCCTGCGCTTCGTGGGGGGGG
ACTCGAGCAAAGGCTTCCACGGACCGCAGCACCCCGTCTCTGTTTGGGAC
GTGATCGCAGAGTACGAGATAGGGGCCGTGGCGGCCGAATGAATGACAGC
CGACGACTCCTCCTTCCTGACACCGCCACATGCGGTCACGATAGGTGTCG
TCGCAGCGTGCCTGCTTGCAATTATATTCATTAAAGCTAAGTCGTCATCC
ACTTCGACGACGCTTGACTCGAAGGCACCCGTGCCTGTCCTTGTCGAAGT
CCCGGATGCAGTCCTGAATCGCCGTTTTAAGTACGATCTTCCCAATAGGG
CTTTGGTGACGGGGGGAAACGGTTTTGTCGGACGCCGTATTGTTGCAATG
CTCTTGGAACAGGGGTGTGATGTGACCGTATTCGACATCACCAAGGGGTT
CGAAGACGAACCTCGCGTCAAAATGGTAGTCGGGAACCTGGTAGAAACCG
CAGATGTCGCGAAGGCCGTAGAAGGGATCGAAGTGGTCTATCACGTAGCA
GCACCGCATGCCTCCCACCCCCCCGCGGTGCAGTTTGCGGTCAATGTCAC
CGGGACCCGGGCCCTGCTCCAGGCATCCGCAGCCGCGGGCGTGAAAAAGT
TTGTCTTCACGTCCTCGGCTAGCGTCGTGTACGAGGGGGGAAATCAGGCG
GGTGTGGACGAGAGCACGCCCATCCCTACGGCCAGTCTGGACTCCTATAC
AAAGACGAAGGCGGAAGCCGAGGCCCTGGTCCTGGCGGCGAACGGGCAGC
ACGGCATGCACACGGCGGCCATTCGGCCCCACGGGATATTCGGACCGGGT
GACAGGCAGTTCTTCCCGGTGTTGGTGGAAAGCGCTCGAAAGGGCAAGAC
CAAGTACGCCCTGGGCGAGGGCAGGAATGTGGCTGACTTTACATTCGTAG
GGAATGTGGCTCACGCGCATTTGCTGGCGGCGGAGAAGCTCGGCAAGGTG
CCGGGAGTGGACGGACAGGCCTTTTTTGTCACGAACGACGCGCCCGTGCC
CTTCTGGGATTTCTTGGCACAAGTGCTGACAGGATTTGGATACCCGGCGC
CCAGTGTCCGCCTGCCCGCGGGGCTCATGACCGTCGTGGGAGGCTGGATG
GATGGCATGGCGACCCTCCTGCGCATGGTGGGCGTGAGATTTCAGCCTAC
TTTCACAAGATCGAGGGTGCAGTACTTGACGACGCATCACTACTACAGCA
TCGAGAAGGCGAAGCGCCTGCTGGGCTATGCGCCTGCCTGGTCGCAGGAG
GAGGCGCTGGCCCTATGCTTCCAATGCATGATGCCCGCCCTCGCAAACCC
CCGGGCGCCCAAGCCTCGCCGAGTGACGGTGAAGAAAGGGCAGAGCGTGC
CCGTCTATAGGATGCAGCAGGTGTCTCGGCACAACACCCGCGGGGACGCC
TGGATCGTGGTGGACGGCAAGGTCTATGATGTGACCGAGTACGTGGACGT
ACATCCTGGGGACGACGCTATCCTGCGCTTCGTGGGGGGGGACTCGAGCA
AAGGCTTCCACGGACCGCAGCACCCCGTCTCTGTTTGGGACGTGATCGCA
GAGTACGAGATAGGGGCCGTGGCGGCCGAATGAATGACAGCCGACGACTC
CTCCTTCCTGACACCGCCACATGCGGTCACGATAGGTGTCGTCGCAGCGT
GCCTGCTTGCAATTATATTCATTAAAGCTAAG back to top
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