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Properties
| Property Name | Value |
|---|
| Product | lipase family protein |
| Orig transcript id | gnl|cribi|Naga_100046g19.5137.mrna |
| Orig protein id | gnl|cribi|Naga_100046g19.5137 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:732786..735167 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3573 ID=rna3573|Name=rna3573|organism=Nannochloropsis gaditana|type=mRNA|length=3764bp
CGTAGACGTACCATGCTGGCGTGTATAATTTGAGTAGTTGATGGACGTTG
GTTGTGCGGTGCTTCCTCCGGTGCCCCAAGGGTCTCCCCAAGACGGCCAG
GTCCAACCGACGTCTTGGGGTGAGGTTTGCGATGACTGAAAAGGAGCCCC
ACGAATATTAGACGTGCTTGTGCCAGTACTTGGAGCACTCTCAGCTGGTG
CCCCTGGAAAGGGAGCGTCAGGGATGGCCAAAGAGGTTCCTATCAAGTAA
AGAACAACGAGGCAGAGGCAAGCACGACCTGAAGGTGGGCCGTGCATGAT
GCTGCATGTGGGAGGGCAAAAATGGGTATGACTTAAACTCGCAATAGGAT
AGGTACATGGCTGTAAAATTGAGCATCACATGTGCAACATACGCTCATAC
TTAAAAGTATACCCGAAAGATTTCCTCGCGGAGATGGTTGCAAGTGGGTT
TATGGCCAAATTTTCGGGCAACAGAACAGAAAAGAAACCAAAAAAACGCC
GGCGCAAACCGAGCCTCCAAAAAGGATGTCCACCATCGCCTTTTTTGCAT
AGTGGTTGTACAAAAGGTTTTGTAACACCTCACAACATGTTTTTACGTGG
CTTCACAGAATGTTGGATCATGGGCGGGTGATGAAAAGTGCAAATACTGT
CTGTTGTAGATCATCGACCTCCTGCTCGAGGCTCGTGTGGCCCGGGGCAG
GGCGAAGATACTTTTTACGAGGTCACTTAGCGCCATAAACCAAACACATA
CGAGCGTACTCGACGTATGAGGTTGAGGAGGTGCGCATGCACGTTCCAAA
CCATCTCACTGGGCACGAATCGTGCTGTGCCGGGCCTGCAATCACCGGGG
CAGGGAGTGAAAGGAAGAGCATCCAGGTCATCGCCTTTCCCTCTCTTGCA
TGCGCGCCACGAGCGAGTACGCAAGCTTTTCCATTGTTCAACAAGCACGT
TTATGCCACTCAAACATTCGCCTGCCATGGGGACACTTATGCCCGGGTAT
ACTGTATTAGAGGTCGCCTCACTTTTTGTCAGAATTTTAAGGTCGATGAC
AGCGCCTTATAAGGAGGGCCACGGCCATTTCGATGGTTGAGTTGTCAAAG
CAGGCCAACGAGCTTTATCAGTGACGCTCAGCAAAAGCTTACTACAGGTC
ATGCCACACTGCATGATCTTTCACCTATCCGTTTACTTACGTGACAAGCA
AATTTCATGACATATTTCTAGGCATCGGTGGCCTTTCCTGTAGAGACTTT
CATTTCGTGCCTTTCCCGTGGTTGAAGCCGGCTCGTCAACATGAATTATC
ACGACGACACGGCGACCCCACCGGATACATACAAGCCCACATTGACGGTG
TCCGATGCCCATCGTACTGAAGAAAAGCAATCTCGAAAGATTGTCCGCGA
AGCGAAGCAAGTGTTGTCATACTCTGATAGCACCTTCTCGGACCAGTTGA
ACGCCTTACGGGTCTTGATCTTCGTCACTTTGGAGCACCCCCGCTCCAGC
CGGCTGGCCTGGTACATTTCTATCTTTTTGGTCGCCTGCATCCTTCTTAA
TGCCATCTCTTTCATGGTCGGCACAATTCCCTCAACGCTGCGGCACCCTA
CGACGTGCGCCGATCCCGTCTGTGAGCCGGGCCCCACCACCTTTTGCACA
GAGGTGGTTTGCCGTCCGCGGGAGAATCGTATCATTTGGCATTTGGAGCT
CTGGACCATCGTCATATTCACGATCGACTATCTGCTTCGTGTCTTTTGCG
TCCCTGCGGTCCCCGTGGACCTGGTCTTCCCCCGGTCTCTTGAGTACACG
ATCGACGGGCGCCTGAAGGACCGCTCCAACTACTACCGGATGGACCCCTG
CAAGAAGACAACCAAGTACATGCTCTCGGGCCTGAACATCATCGACGTCA
TCTCCATCGTCCCCTTCTACGTCTACCTCCTCGCCCCCTACCCCGCCATT
CGCGTCTTTCGCTTCCTCCGCTTCCTTCTCATCTTCAAGCTCGGCCGGCG
ATTCCGGGAAGCGGGCGCCATCATCTCCCGCACCCTCCGCGCCTCTCTGC
CCGCCCTCCTCATCTTCGTCTTTCTGACCACGGTCCTGGCCATCGTCTTC
GGTTCCATGATGTTCTACTTTGAGGGAGGTATCTATTCGGTAACGATGGA
ATTTCCCGCCGGGGGCTTCCTCCGGCCCAATGACCGTAACACCGCTCTGG
AGCAATCGCCCTTCCAGTCGATTTTCACAGGGGTCTACTGGTACGTCGTC
AACACCACCACGCTAGGGAATGCCAACCTATACCCGACCACCACAGGCGG
GCGCATTGCCTCCTGCTTCATCGCCTACTGCGGTCTCCTCTCCCTGGCCC
TGCCCATCACCATCATCGGCCAGAACTTTTCCCAGCAGTACAACCTCGTC
TACGCCGACCCCGACATGCAGCCCCACCTCTTCTACCCCTCGACACCCCA
CACACCCCGCACGCCCAAGGGCGGGCCCTCCCAGACCCCCGGGCGCAAGG
GCCTGGCGCCCGGCACGCGGGACGGCTTCCGCAGCAAGATGGGCGGGGAG
AAGCAGGACATCGACTACGTGCCTCCGGAGCAGGAGATCGAGGCCCTGCG
CGCGCACTTCCAGCAGCAGATCGACGCCCTTCGCCTGCATGTCCAGGGCT
CCACCGCGGCCTCGGCGGCGCCCGCCCAGCAGGAAGTCGACGCTTTGCGG
TCCTACGTGCAGCGGGAGATCGGCTCCTTGAAAATGAGCCTAAACGACGT
CCAGGGCAGGACCCCTCGAGCGTCGGAAGAGAGCGATACGACCGCCTCGC
GTGCATTCTCTCCTTCCAATGACGGCCGCAACATGGACATGAGCCGGAGC
AGCAACGCGGGGGCGCAGCGACGGCGGGAGCAGGAGGAAGAAGAGGACAG
GGAGCACGCAGCCCAACAGTCTCTCAGGGACGCCGAGATCAACCGTTTCC
GCAATCAGATCACGGAGGGGATCCGGCGTTTTAGCCCTCAGGCGGAGCTG
GAGTCGCTCCGAGGGGGGCTTTACTAGGCCCGGTGGCGGAGGACTCGATG
CGCTGCGGGGTCGCCAGTGGAGGGGAAGAAGGAGGGGCGGGAGGGGGAGA
GAGGCGTATGGAGCGCTACCTTGAGAACGAGGTTTGAGAAGGGAGAAGAT
GCGATGTAAGAAGAGTGAGGAGGCGAATCGACGAGAAAAATGAGCGTGCG
GGAAGGCGTTCGGCTCAAGAGGAGGAGTCCCTCGGGATCATTTGTCTGCT
GACACTCACGTCGATTCCCGTGAGTCTCGCATTGAGGTTGCTCTCAAAGG
GTCATGCCAAGTTGGTGTGGCGCTATTCGTCGAGTGAGACATAGAGAAAA
GGACAATGATTTGGCATTTAGCTTTGCATTTAGATTGAACTTACCAGAGG
TATATTTATAAACTTCAATTATGTCTTTCGCGCACGTGTAGCGAAAGGAA
GAGACCAATAGAATTGTAATCAATGGGCTTACGCGATGGCATATATACTG
TGAGAGGAGGCCGCGCGTGTGGAGAGTTCTTTTCAAGGAGAGGGGGAAAA
GGTTGGCGTGCGAACACACTCGATGTAAAAGAAAAAGAGCGAGGGAAGGA
GGAGGAGAGTAGTCGATGTAACAAAGTGCGTTAAGATGAGGCGGTTTGCT
AGTCCGCCTGAGCGCCTGAGGGAGAGATTGGAGGAAGTGCCTCATGAGAG
AGCTAGGAATGACGAGATGGCTCCAGAAAAGAAAAGAAGCAAACAGATAA
TGCGTGCCGGCTGA back to topprotein sequence of rna3573 >rna3573-protein ID=rna3573-protein|Name=rna3573|organism=Nannochloropsis gaditana|type=polypeptide|length=507bp
MHGPPSGRACLCLVVLYLIGTSLAIPDAPFPGAPAESAPSTGTSTSNIRG
APFQSSQTSPQDVGWTWPSWGDPWGTGGSTAQPTSINYSNYTRQHGTSTT
SASEFPACSIQAALNEDGLICLAGSLWLALTQTLPPQLGWGSKIRPPVDP
LRELPQPLEVLSMPLPALVPTEKVEAEKPTYYFLYRAIQNLYAAVGANAR
SRGTDSAQEPMLNLALPPAWTNQREYTLRWTGSLVAGVLQPQAPFAVSFT
RDKEMLVVVRGTIYSAEWQRNFQYQHADPTETAAYRMPGGVHAGFFAVFK
DLAEALVDDEIKRQAPSKVTFTGHSLGGSVGALLAFYTTHVLPRTQVELV
SFGAPNVGDATFSSAFNARVRNRHLAFSGVGSEGDSYFIGDWISQVPCGA
VTTCPLLTEMSSVDLNGSPSGQRQANESYSYTALGGSVPFTPAQMQNGRT
WALRSDVAGFRYSPVAAHTCSYMCFTAPSVGDAYDQCVFTLELGSSVDMD
KRCAINL back to topmRNA from alignment at CM002461.1:732786..735167+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3573 ID=rna3573|Name=rna3573|organism=Nannochloropsis gaditana|type=mRNA|length=2382bp|location=Sequence derived from alignment at CM002461.1:732786..735167+ (Nannochloropsis gaditana)
CACCTCCTCAACCTCATACGTCGAGTACGCTCGTATGTGTTTGGTTTATG
GCGCTAAGTGACCTCGTAAAAAGTATCTTCGCCCTGCCCCGGGCCACACG
AGCCTCGAGCAGGAGGTCGATGATCTACAACAGACAGTATTTGCACTTTT
CATCACCCGCCCATGATCCAACATTCTGTGAAGCCACGTAAAAACATGTT
GTGAGGTGTTACAAAACCTTTTGTACAACCACTATGCAAAAAAGGCGATG
GTGGACATCCTTTTTGGAGGCTCGGTTTGCGCCGGCGTTTTTTTGGTTTC
TTTTCTGTTCTGTTGCCCGAAAATTTGGCCATAAACCCACTTGCAACCAT
CTCCGCGAGGAAATCTTTCGGGTATACTTTTAAGTATGAGCGTATGTTGC
ACATGTGATGCTCAATTTTACAGCCATGTACCTATCCTATTGCGAGTTTA
AGTCATACCCATTTTTGCCCTCCCACATGCAGCATCATGCACGGCCCACC
TTCAGGTCGTGCTTGCCTCTGCCTCGTTGTTCTTTACTTGATAGGAACCT
CTTTGGCCATCCCTGacgctccctttccaggGGCACCAGCTGAGAGTGCT
CCAAGTACTGGCACAAGCACGTCTAATATTCGTGGGGCTCCTTTTCAGTC
ATCGCAAACCTCACCCCAAGACGTCGGTTGGACCTGGCCGTCTTGGGGAG
ACCCTTGGGGCACCGGAGGAAGCACCGCACAACCAACGTCCATCAACTAC
TCAAATTATACACGCCAGCATGGTACGTCTACGACGTCGGCCAGCGAATT
TCCGGCTTGCTCCATCCAGGCCGCCTTGAACGAGGATGGTCTAATCTGCC
TGGCGGGCTCCTTGTGGCTGGCCTTGACTCAAACCCTGCCTCCACAACTG
GGCTGGGGATCGAAAATCCGCCCCCCCGTCGATCCGCTGAGGGAGCTTCC
ACAACCTCTTGAAGTCCTGAGCATGCCTCTGCCCGCCCTGGTGCCCACGG
AGAAGGTAGAGGCCGAGAAGCCCACCTACTACTTCCTTTACCGGGCTATC
CAGAACCTCTACGCCGCTGTAGGCGCGAACGCTCGAAGTCGAGGCACCGA
CTCGGCGCAGGAGCCTATGCTGAACTtggccctgcctcccgcgtGGACGA
ATCAACGGGAGTACACGCTGCGATGGACCGGGAGCCTGGTCGCCGGCGTG
TTGCAACCGCAGGCCCCCTTCGCCGTGAGCTTTACCCGCGACAAGGagat
gctggtggtggtaCGTGGAACGATTTACAGCGCGGAGTGGCAGCGAAATT
TCCAGTACCAACACGCCGACCCCACGGAGACGGCTGCGTACAGGATGCCG
GGAGGCGTGCACGCGGGCTTCTTCGCCGTCTTCAAGGACCTAGCCGAGGC
CCTGGTCGACGACGAGATCAAGAGACAGGCACCCAGTAAAGTCACATTCA
CCGGACACTCCCTCGGGGGCTCCGTGGGCGCCCTCCTAGCCTTCTACACg
acccacgtcctcccccggaCCCAGGTCGAGCTGGTGAGCTTCGGCGCCCC
CAACGTGGGCGACGCGACGTTCTCGTCGGCCTTCAATGCACGGGTCCGCA
ACCGGCATTTGGCCTTTTCGGGCGTGGGCAGTGAGGGAGACTCGTATTTC
ATCGGGGACTGGATCAGCCAAGTGCCGTGCGGGGCCGTCACGACCTGTCC
GCTCCTCACGGAAATGAGCTCCGTCGACCTGAATGGCTCGCCTAGCGGGC
AAAGACAGGCAAACGAATCCTATTCTTACACGGCACTAGGTGGTTCTGTG
CCTTTTACACCGGCCCAGATGCAGAATGGTCGGACTTGGGCACTCCGATC
CGACGTGGCGGGCTTCCGTTACTCCCCCGTGGCGGCCCATACATGCAGCT
ACATGTGCTTCACGGCGCCGTCGGTGGGGGATGCTTATGATCAATGCGTC
TTCACGCTCGAGCTCGGGAGCTCTGTGGACATGGACAAGCGGTGTGCCAT
CAATTTgtaggggaagggaaggaggaggagagggcgtgcGTGTCAAGCAA
TCGGTACGGGGTGACGGGGAAGCAGTTTGTAGAAAGGGTGCTGTGGGTAA
AGGAATTGAGAATACAAAGCTTTGTGGTATGAAAGAACTGTATATGGGAT
GCTGTGTGAATAATGGAACATGAAGGGGTTTAGCATGATGCCGGCTCAAA
ACAACTTTGCAAACGGGTGGGGTGTCGGGGAAAACGAATGAGGGgaatgg
cggaggcggcggcatgACAGACGCAGGTCATGAGAGAGTTAAGCAAGATG
GGTTTGAGGCCTTATCAGCAGAGCGATCCGAATGTTGCAAGGTCACGCAT
AAAAGAATAAAATTTACCGTGTGGGACGTCCG back to topCoding sequence (CDS) from alignment at CM002461.1:732786..735167+ >rna3573 ID=rna3573|Name=rna3573|organism=Nannochloropsis gaditana|type=CDS|length=1524bp|location=Sequence derived from alignment at CM002461.1:732786..735167+ (Nannochloropsis gaditana)
ATGCACGGCCCACCTTCAGGTCGTGCTTGCCTCTGCCTCGTTGTTCTTTA
CTTGATAGGAACCTCTTTGGCCATCCCTGacgctccctttccaggGGCAC
CAGCTGAGAGTGCTCCAAGTACTGGCACAAGCACGTCTAATATTCGTGGG
GCTCCTTTTCAGTCATCGCAAACCTCACCCCAAGACGTCGGTTGGACCTG
GCCGTCTTGGGGAGACCCTTGGGGCACCGGAGGAAGCACCGCACAACCAA
CGTCCATCAACTACTCAAATTATACACGCCAGCATGGTACGTCTACGACG
TCGGCCAGCGAATTTCCGGCTTGCTCCATCCAGGCCGCCTTGAACGAGGA
TGGTCTAATCTGCCTGGCGGGCTCCTTGTGGCTGGCCTTGACTCAAACCC
TGCCTCCACAACTGGGCTGGGGATCGAAAATCCGCCCCCCCGTCGATCCG
CTGAGGGAGCTTCCACAACCTCTTGAAGTCCTGAGCATGCCTCTGCCCGC
CCTGGTGCCCACGGAGAAGGTAGAGGCCGAGAAGCCCACCTACTACTTCC
TTTACCGGGCTATCCAGAACCTCTACGCCGCTGTAGGCGCGAACGCTCGA
AGTCGAGGCACCGACTCGGCGCAGGAGCCTATGCTGAACTtggccctgcc
tcccgcgtGGACGAATCAACGGGAGTACACGCTGCGATGGACCGGGAGCC
TGGTCGCCGGCGTGTTGCAACCGCAGGCCCCCTTCGCCGTGAGCTTTACC
CGCGACAAGGagatgctggtggtggtaCGTGGAACGATTTACAGCGCGGA
GTGGCAGCGAAATTTCCAGTACCAACACGCCGACCCCACGGAGACGGCTG
CGTACAGGATGCCGGGAGGCGTGCACGCGGGCTTCTTCGCCGTCTTCAAG
GACCTAGCCGAGGCCCTGGTCGACGACGAGATCAAGAGACAGGCACCCAG
TAAAGTCACATTCACCGGACACTCCCTCGGGGGCTCCGTGGGCGCCCTCC
TAGCCTTCTACACgacccacgtcctcccccggaCCCAGGTCGAGCTGGTG
AGCTTCGGCGCCCCCAACGTGGGCGACGCGACGTTCTCGTCGGCCTTCAA
TGCACGGGTCCGCAACCGGCATTTGGCCTTTTCGGGCGTGGGCAGTGAGG
GAGACTCGTATTTCATCGGGGACTGGATCAGCCAAGTGCCGTGCGGGGCC
GTCACGACCTGTCCGCTCCTCACGGAAATGAGCTCCGTCGACCTGAATGG
CTCGCCTAGCGGGCAAAGACAGGCAAACGAATCCTATTCTTACACGGCAC
TAGGTGGTTCTGTGCCTTTTACACCGGCCCAGATGCAGAATGGTCGGACT
TGGGCACTCCGATCCGACGTGGCGGGCTTCCGTTACTCCCCCGTGGCGGC
CCATACATGCAGCTACATGTGCTTCACGGCGCCGTCGGTGGGGGATGCTT
ATGATCAATGCGTCTTCACGCTCGAGCTCGGGAGCTCTGTGGACATGGAC
AAGCGGTGTGCCATCAATTTgtag back to top
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