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Properties
| Property Name | Value |
|---|
| Product | FAD dependent oxidoreductase |
| Orig transcript id | gnl|cribi|Naga_100046g2.5138.mrna |
| Orig protein id | gnl|cribi|Naga_100046g2.5138 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:695869..697927 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3559 ID=rna3559|Name=rna3559|organism=Nannochloropsis gaditana|type=mRNA|length=1925bp
AACGGTCAGACACGAGAAGGATACTCCCACGTCCCAGGCGTAATAGGACA
GCTCACTTGAGTCTCCCTACTTTGTCCTGATGCTATCGGGGCAAAAGAAT
TACTTTCTCACGCTCAAATATTTCTTTTTGATAGGATTAGGACTCGCAGT
GTGATCTGGCGGTCTTCCTCTTGTGACGCGCTGTTTGAAGGCTTTAAATG
CGTTCCATCGGTGCAAAAAGGCTTGGCTCAAGCACCCGCACTCAGGACTT
CACCACGTTGTTGGCAGTCTTTTGTGTATTAATGAAGGTCACGACGTGTA
GAGCCTGGCATTATTCTGGTAGAATTGCGACAAGTAGGCAGATGCTCTCA
GGCATTGGTCCCTTGTTACGCCGCAAATCCTTCATCATACATCCTGCCAC
GTCAACAAAGTCAAGGCAACACATTTCCATAACCGCAAACGCCGCCGCTG
AAGGTAGCCGGGGTAGCGCGGCAGTCGCACAAGATTTAAAGAACAGCAGG
GAGACGCAAAAGGAGAGACAGGGCAAGTTAGATTTAAACCCTCCGCGAGG
TACACGAGACTTTTATCCGGAAGACATGCGGACGCGGAGTTGGCTCTTCG
AACTCTGGCGGCAGGTAGCCCGTGACCACGCGTTCGAGGAATACGACGCA
CCGGTCCTTGAATCCGAGGATTTATTTGTCCGCAAGGCTGGAGAGGAAGT
CACAGAACAGCTGTACAATTTTGAGGACAAAGGGGGTCGACGCGTGGCTT
TGCGGCCTGAAATGACGCCATCGTTGGCAAGGATGGTGATGGCGAAACGC
AATGGCTTAGTCATGCCGGTCAAGTGGTTTTCATTTCCGCAATGCTGGCG
ATACGAACGTATGACCCGTGGCCGTCGCCGCGAGCACTACCAATGGAACA
TGGACGTATGGGGAGTCTCGGGTGTGGAGGCCGAAGCGGAATTGCTATCT
GCGATCACGACATTTTTTAAACGCGTGGGCCTCACAGCAGAAGACGTCGG
CATCAAAGTAAGTAGCCGAGGAGTCCTAGCAGAGGTTCTTGCTGCTTTGG
ATGTCCCAGATGCAAAATTTTCGGCGACATGCGTGCTGGTGGACAAGTTG
GAAAAGTTACCGTTAGAGGCGATCCAGGGGGACCTGACAGCGTTAGGTTT
GGAGGAGTCCGTTGTGCGACGATTGCTTGACGTCGTCCAAAGCAGAGACT
TCCCTAGTCTGGAAACAGCGATTGGTGCAAAAAGCACGGCCTTGGCTCAG
CTACGGCAGTTGTTTGAATACGCCCGGGCATACAATTTCGAGGAATGGTT
GGTCTTGGATGCGTCTGTAGTCAGGGGGCTTGCGTATTACACAGGAATAG
TCTTTGAAGCATTTGATAGGAAAGGAGAACTACGAGCAATATGTGGTGGA
GGGCGGTATGACAAGCTTCTGGAGACCTTCGGAGGGGAGGCCTTGCCTGC
TGTGGGCTTTGGGTTTGGCGACGCTGTAATTATGGAGCTCTTGGAGAGCA
AAGGGCTAGTTCCGTCGCTATCATTGGGTTTGGACGCGCTTGTCTTTGCG
ATGGAAGCCGGCCTACAGGGTATCGCAATTAGAGCTGCGACTTCATTGCG
CGCAGCGGGCCTCACAGTAGACTTACAGCTAGAAGCGCGGAAGACCAAAT
GGGCTTTGAAGCACGCAGACAGGCTTGGGGCGACGTACGTCGTCATTGTT
GGACCCGAGGAGGTAGCTGGATGTAACGTTCGAGTGAAGGAAATGGCGAC
AGGTCAGCAGCATGTCGTGGCCATCGCGAACTTGGAGTCTTGGATAAGTG
CGACTTTCACGACGACGTCGCCAGAGAGTGCGTTTGCGGATAGTGTCAAC
CGTTCATGACGAGTGCTGAGAACTACCTAGAGGCATGAATGCTAAAGATA
AATAATCCATGATTGTCTCACCGGT back to topprotein sequence of rna3559 >rna3559-protein ID=rna3559-protein|Name=rna3559|organism=Nannochloropsis gaditana|type=polypeptide|length=469bp
MPFISRTALIATLFLFYCFKPDMAHSLLLHGLRGSLPVCLSKSLLSSKPE
PSNLKVAVVGGGLAGLSTAWHLTGLVKQVSIFDPRPPGQAEASAVAGGLL
HPLTPKNRLLWCGLRGFEATSRLVVSSKTALSNYGDTAGASRLQSAPGAI
LRPALTSQHVIDFQAAAKRLPNWLKWLNGEEWEQKVGVPGHGLLLRQSAI
LSMPDYLRGLWLSSQARAERSYTALTWESSLFTADCVKQSGAKYDVVVLA
SGAGIRAFPELEHLPVEFVRGRTLLVADESKGGVEPSEQESAPSLQCALL
CGEYVVPGVDTEMCSDAEGKERRVLRCGSTREYLRDSWHVQDGIGVGKMG
GRRTEEWFQSEKNDGEIASLRRKAESIYPPLRQGPEAYRVTSGTRVATRR
SNLGKLPIVGRLEQTKVAEGIKAETWLFTGLGGRGVVHHGFLGECLAQAI
LTGDETHLPSEVRAPLQRL back to topmRNA from alignment at CM002461.1:695869..697927+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3559 ID=rna3559|Name=rna3559|organism=Nannochloropsis gaditana|type=mRNA|length=2059bp|location=Sequence derived from alignment at CM002461.1:695869..697927+ (Nannochloropsis gaditana)
TAACAAGGGACCAATGCCTGAGAGCATCTGCCTACTTGTCGCAATTCTAC
CAGAATAATGCCAGGCTCTACACGTCGTGACCTTCATTAATACACAAAAG
ACTGCCAACAACGTGGTGAAGTCCTGAGTGCGGGTGCTTGAGCCAAGCCT
TTTTGCACCGATGGAACGCATTTAAAGCCTTCAAACAGCGCGTCACAAGA
GGAAGACCGCCAGATCACACTGCGAGTCCTAATCCTATCAAAAAGAAATA
TTTGAGCGTGAGAAAGTAATTCTTTTGCCCCGATAGCATCAGGACAAAGT
AGGGAGACTCAAGTGAGCTGTCCTATTACGCCTGGGACGTGGGAGTATCC
TTCTCGTGTCTGACCGTTGAGAATCCATCTTCAAAATAATAAACTCACGA
AGCATCAGTTCCCAAAAAGTCATCTACACTAACAGATGCCCACGTGGAGA
TAGAAAGGATCATATGCCTTTCATTTCTAGGACGGCCTTGATAGCAACGC
TTTTCCTATTTTATTGCTTTAAGCCGGACATggcccactccctccttcta
caCGGACTCCGTGGGTCACTTCCAGTATGCCTTTCCAAGTCATTACTCTC
CAGCAAGCCAGAGCCGTCTAATTTAAAAGTAGCTGTTGTGGGTGGTGGGC
TAGCCGGTCTATCGACTGCGTGGCATTTGACAGGCTTGGTGAAACAAGTT
TCGATCTTCGATCCGCGTCCGCCCGGACAGGCCGAGGCCTCAGCCGTCGC
AGGGGGCTTGCTGCACCCTCTCACTCCTAAAAACCGCTTACTTTGGTGTG
GATTAAGAGGGTTTGAAGCCACGAGTCGCCTCGTCGTGTCAAGCAAGACA
GCATTGTCGAATTATGGCGACACAGCAGGAGCAAGCCGGCTGCAGTCGGC
ACCAGGCGCTATCCTACGTCCGGCTTTGACCTCACAGCACGTGATTGATT
TCCAGGCCGCAGCGAAACGACTTCCAAATTGGTTAAAATGGCTGAAtggg
gaggagtgggagcaaAAAGTGGGTGTCCCAGGTCATGGTTTGCTTCTTCG
GCAAAGCGCCATACTGTCTATGCCTGACTACCTTCGAGGCCTGTGGCTAT
CGAGTCAGGCACGTGCTGAACGGAGTTACACCGCTCTGACGTGGGAGTCA
TCTTTATTTACGGCTGACTGTGTGAAGCAATCTGGCGCGAAGTACGATGT
TGTGGTCCTGGCTTCTGGTGCCGGGATTCGAGCTTTCCCAGAACTCGAGC
ATTTGCCTGTGGAATTTGTGAGAGGACGAACGCTTCTAGTGGCAGATGAA
TCAAAGGGTGGCGTGGAGCCTTCGGAGCAGGAAAGTGCTCCGTCCCTGCA
GTGCGCCTTACTGTGCGGTGAATACGTGGTACCGGGTGTGGACACGGAAA
TGTGCTCagacgcggaggggaaagagcgccGAGTGCTTCGATGCGGTTCT
ACCAGAGAGTACTTGAGAGACTCCTGGCACGTGCAAGACGGGATTGGAGT
TGGAAagatggggggaaggaggacagaggAATGGTTCCAAAGTGAAAAGA
ATGACGGGGAAATCGCCTCTttgcggaggaaggcggagtCGATCTATCCC
CCGCTCCgacaggggccggaggcTTACCGCGTCACCTCCGGCACCCGGGT
GGCCACACGCCGGAGCAATTTGGGGAAGCTTCCTATCGTCGGTCGGCTCG
AACAGACAAAAGTAGCGGAGGGTATCAAGGCGGAAACCTGGCTGTTCaca
ggcctgggagggaggggggtggtcCACCATGGTTTCTTGGGGGAATGCTT
GGCTCAGGCCATCCTGACGGGGGACGAGACACATTTGCCCTCAGAGGTCA
GAGCCCCTCTTCAGCGATTGTAAATAGACGTCAGGGAGTGCTGAAACCTG
TGTTGTAATTAACTGTACGTTCCGCAAGCACGAACCCAGCATGCGTGGAA
CGACACCGATCGAAAGCAATCCCGAGGACTGGAGGATGCACGCACGCAGA
TGCTCTTAACCACATGGATCTGGTAGAAGATCTCTTCACTTTGTTCGTTG
CTAGGCATG back to topCoding sequence (CDS) from alignment at CM002461.1:695869..697927+ >rna3559 ID=rna3559|Name=rna3559|organism=Nannochloropsis gaditana|type=CDS|length=1410bp|location=Sequence derived from alignment at CM002461.1:695869..697927+ (Nannochloropsis gaditana)
ATGCCTTTCATTTCTAGGACGGCCTTGATAGCAACGCTTTTCCTATTTTA
TTGCTTTAAGCCGGACATggcccactccctccttctacaCGGACTCCGTG
GGTCACTTCCAGTATGCCTTTCCAAGTCATTACTCTCCAGCAAGCCAGAG
CCGTCTAATTTAAAAGTAGCTGTTGTGGGTGGTGGGCTAGCCGGTCTATC
GACTGCGTGGCATTTGACAGGCTTGGTGAAACAAGTTTCGATCTTCGATC
CGCGTCCGCCCGGACAGGCCGAGGCCTCAGCCGTCGCAGGGGGCTTGCTG
CACCCTCTCACTCCTAAAAACCGCTTACTTTGGTGTGGATTAAGAGGGTT
TGAAGCCACGAGTCGCCTCGTCGTGTCAAGCAAGACAGCATTGTCGAATT
ATGGCGACACAGCAGGAGCAAGCCGGCTGCAGTCGGCACCAGGCGCTATC
CTACGTCCGGCTTTGACCTCACAGCACGTGATTGATTTCCAGGCCGCAGC
GAAACGACTTCCAAATTGGTTAAAATGGCTGAAtggggaggagtgggagc
aaAAAGTGGGTGTCCCAGGTCATGGTTTGCTTCTTCGGCAAAGCGCCATA
CTGTCTATGCCTGACTACCTTCGAGGCCTGTGGCTATCGAGTCAGGCACG
TGCTGAACGGAGTTACACCGCTCTGACGTGGGAGTCATCTTTATTTACGG
CTGACTGTGTGAAGCAATCTGGCGCGAAGTACGATGTTGTGGTCCTGGCT
TCTGGTGCCGGGATTCGAGCTTTCCCAGAACTCGAGCATTTGCCTGTGGA
ATTTGTGAGAGGACGAACGCTTCTAGTGGCAGATGAATCAAAGGGTGGCG
TGGAGCCTTCGGAGCAGGAAAGTGCTCCGTCCCTGCAGTGCGCCTTACTG
TGCGGTGAATACGTGGTACCGGGTGTGGACACGGAAATGTGCTCagacgc
ggaggggaaagagcgccGAGTGCTTCGATGCGGTTCTACCAGAGAGTACT
TGAGAGACTCCTGGCACGTGCAAGACGGGATTGGAGTTGGAAagatgggg
ggaaggaggacagaggAATGGTTCCAAAGTGAAAAGAATGACGGGGAAAT
CGCCTCTttgcggaggaaggcggagtCGATCTATCCCCCGCTCCgacagg
ggccggaggcTTACCGCGTCACCTCCGGCACCCGGGTGGCCACACGCCGG
AGCAATTTGGGGAAGCTTCCTATCGTCGGTCGGCTCGAACAGACAAAAGT
AGCGGAGGGTATCAAGGCGGAAACCTGGCTGTTCacaggcctgggaggga
ggggggtggtcCACCATGGTTTCTTGGGGGAATGCTTGGCTCAGGCCATC
CTGACGGGGGACGAGACACATTTGCCCTCAGAGGTCAGAGCCCCTCTTCA
GCGATTGTAA back to top
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