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Properties
Property Name | Value |
Product | methyltransferase-like protein 1 |
Orig transcript id | gnl|cribi|Naga_100419g3.1240.mrna |
Orig protein id | gnl|cribi|Naga_100419g3.1240 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002461.1 | supercontig | CM002461.1:682705..684628 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3553 ID=rna3553|Name=rna3553|organism=Nannochloropsis gaditana|type=mRNA|length=1614bp CATTAGATGAGCAGATTTGTACCACTTTCCTCAAATATATACATCATAGG CTGTAAATAGGCATTCGGGAATCTTCTGGCAGGCCCTGGCGTATCACGAG CTTTCGCAGTGGCAGGAAAATCGTCCGAATCATGTCTTGTGCTATTTCTT GTGTGAAGCGCGGACTTATGAACGTCTCGCGACGGCAGAGGCTGAATTAC CAGGCAAATACTACGGAAGACATATTAAGCGGGGGGCGTCGAAGACTCTT TTCGTCGATGGCGGCCAAGGCAGTTCAAAGCAAAGCTGATAGATACATGC AACTTGAGGACCTGCACGGAGCGCACAACTACCATCCACTGCCGGTCGTT CTCTCGCGTGGCCAAGGCGTGCACGTCTGGGACGTGGATAACAACAAATA CCTGGATTTCTTGTCAGCTTACTCGGCAGTAAATCAAGGGCATTGCCATC CCAAGATCATTGCCGCGCTGACTGAACAAGCCAGCAAACTAACGTTAGCA TCGCGCGCGTTTTACACCGATGCCTTGGGCGAATACCAGCAGTTCATTAC TAATTATTTCGGCTACGACCGGGTACTTCCCATGAATACCGGTGTCGAGG GCGGCGAGACTGCGGTGAAACTCGCCCGTCGCTGGGGCTATGACGTCAAG AAGATTCCCCGGGACCAAGCGATGGTGGTTTTCGCCCGCGGCAATTTCTG GGGTCGGACGCTGGGGGCGATATCCTCCTCAACAGATCCTTCCTCCCGAA AAGGCTTTGGGCCGTTCATTCCGGGGTTCGACCTCATCGACTACGACGAT CCCGCCGCATTTGAGGCCCTTTGTGAAAGGAAAGGAAGGCGGATCGCAGC TTTTATGGTGGAGCCCATTCAGGGAGAAGCCGGGGTTGTTGTTCCGCAAG AAAACTATTTGAAAAAGATCAAAGCTATTTGTGAAAAACATAACATCCTC CTCATTGCCGACGAGGTTCAAACCGGCTTAGGAAGGACGGGGAAGCTGCT TGCCTCTGAATGGGACTCGACCAAGCCCGATATATTGGTTCTAGGAAAGG CGCTGTCAGGGGGCGTCCTGCCCGTTTCTGCCGTTCTGGCAAGTAATGAA GTAATGCTCACCATCCAGCCGGGAGAGCATGGATCGACATTTGGTGGGAA TCCACTGGCGTGTAAAGTCGCAGCGGCAGCTCTAGCCGTCCTGCAGGATG AAAAGCTGGTCGAGAATTCTATGATCATGGGAGAACGATTTCGATCGGGA TTGAAAGCCATCCCCGCCAACGGGTTGATCGAATCCGTGCGGGGAAGAGG ACTCATGAATGCAATGGTGATAGCGGATCGGAAAGGTGATGGTGGTCCGG CTTGGGACGTGTGCTTGATGCTGAAAGAGTACGGCATGTTGGCGAAGCCA ACACACGGGAACATAATTAGACTTGCCCCACCCTTGTGCATTGATGCGGA TCAGGTCGACCAAGCGCTAGATATTGTGGAGTCAGCGATAAAAAAATTCT GTTAAATGTCTGGTAGGGGCGGTTACGGAAAAGAAAGAAGTGCATAGGGG ATGCGTACGCAATAGCTAGCTGATTTACGATAGTGAGGTTGAAGAAACAA TCTATTTGCGTCAT back to topprotein sequence of rna3553 >rna3553-protein ID=rna3553-protein|Name=rna3553|organism=Nannochloropsis gaditana|type=polypeptide|length=584bp MDRGPMPPPQKRHSTCGQGKGYSHAKSLMAPSTSHVFVKRRNLFLQTFDE QGELQEEESTSLRHNAFEVKNDYSQHFLQTRERPQNFIRDVTVEDGFAEY PKLAKLLSAKQHIVETRKTPAMYVKADLRTFDLRSLGTKFDIIYIDPPWE EYTRRAAPFVLNGKPSVCSETCDASLQLDEVWGHEDLESLPIDEIGELPS FVFLWCGSGGRITEGSAQGALHVEDGRRLLKKWGYRRCEEICWVKTNKHC QHSQPELSTSATSLFVRTKEHCLMGIKGSVRRNRDGHIIHCNVHTDLVVG EQPIDPLSTAKPEEIYTIMEQFCLGRRRLELFGCSRNIRPGWVTVGKDVP GTTYDARTYSRLMEEPGLNPDGTMCAGHLVGSTVLIEDLRPKTPPREQRE REAAMGMLRKAVLRGRMDSLCRSSPRPRSRTVPSVSPQYVQSLHFNKHQK HPEWEQYAQQQAVQGQFWHIYENGFHNEGQYQGFGIYDETSINLSSFDHS EHHREEQHVSFVSPFTYPSDRNGFLPPFPVSQPPPPLASMNTSLHEHVLS SPTYGWRSSPLSSPHGQSGRGRGRERSVFQRKPF back to topmRNA from alignment at CM002461.1:682705..684628- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3553 ID=rna3553|Name=rna3553|organism=Nannochloropsis gaditana|type=mRNA|length=1924bp|location=Sequence derived from alignment at CM002461.1:682705..684628- (Nannochloropsis gaditana) AAAATTTCTGTTTGAGAGACTCATGAATATTCGGCTTTCAGATGCCTTTC
GTTTTCATTTTGTCTCAAACCTTCAACGAACTTCACAGTCACTTCCATCA
TGGATCGGGGTCCAATGCCGCCTCCGCAAAAGCGCCATTCCACATGCGGG
CAAGGCAAAGGGTATTCACATGCGAAGTCACTCATGGCTCCATCAACATC
CCACGTATTTGTCAAGCGACGGAACTTATTCCTGCAGACCTTCGACGAGC
AGGGTGAACTTCAAGAAGAAGAGAGCACAAGTCTACGGCACAACGCTTTC
GAGGTTAAAAACGACTACAGTCAACATTTTCTTCAGACTCGCGAACGACC
CCAGAACTTCATTAGGGATGTAACGGTTGAGGATGGATTTGCTGAATATC
CCAAGCTGGCAAAGTTACTTTCTGCAAAGCAGCACATTGTCGAGACCCGC
AAAACGCCTGCGATGTATGTGAAGGCCGACCTCCGAACATTTGATCTGCG
GAGCCTAGGCACCAAATTTGACATTATATATATTGATCCACCTTGGGAGG
AATACACGCGTCGAGCCGCGCCCTTTGTACTGAATGGCAAGCCGTCTGTG
TGCTCGGAGACATGCGATGCGTCTTTGCAGCTGGACGAGGTATGGGGGCA
CGAAGATTTGGAGTCCCTGCCTATTGACGAAATTGGTGAGTTGCCTAGTT
TTGTGTTCCTGTGGTGCGGTTCAGGGGGGCGCATCACAGAAGGGTCAGCG
CAAGGGGCCTTGCACGTTGAAGATGGTAGGCGTTTGCTTAAGAAGTGGGG
GTATCGGCGATGCGAGGAGATTTGCTGGGTGAAGACGAACAAGCATTGTC
AACACTCTCAGCCAGAATTATCCACCTCCGCAACAAGCTTATTTGTACGT
ACCAAAGAGCATTGCCTTATGGGTATCAAAGGCTCAGTACGTCGTAATCG
AGATGGGCACATAATCCATTGCAACGTCCACACGGATCTTGTAGTAGGAG
AACAACCCATCGACCCGCTTTCCACAGCAAAACCTGAAGAAATTTACACG
ATAATGGAGCAGTTTTGTTTAGGTCGGCGACGTCTGGAGCTGTTTGGATG
CTCGCGTAACATTCGGCCAGGCTGGGTGACAGTTGGTAAGGATGTGCCGG
GCACGACGTATGACGCGAGGACATATTCGAGATTGATGGAAGAGCCGGGC
TTGAATCCAGATGGGACAATGTGTGCTGGTCACTTGGTAGGGTCTACCGT
CCTCATTGAAGATCTTCGACCTAAAACACCTCCACGAGAGCAGCGCGAAC
GAGAAGCGGCCATGGGAATGCTTCGTAAAGCAGTCCTGAGAGGACGAATG
GATTCACTATGCAGGTCCTCGCCCAGGCCCCGTAGCCGCACTGTCCCAAG
TGTCAGCCCCCAATACGTGCAATCGCTCCATTTCAATAAACACCAAAAGC
ATCCTGAGTGGGAGCAGTATGCTCAACAGCAGGCGGTTCAGGGTCAATTT
TGGCATATATACGAGAATGGCTTTCACAATGAGGGTCAATACCAAGGTTT
TGGAATCTACGACGAAACGTCGATAAATCTAAGTTCCTTTGACCACTCCG
AGCATCATCGAGAAGAGCAGCATGTCTCTTTTGTCTCGCCTTTCACGTAT
CCATCCGACCGAAATGGCTTTTTGCCGCCGTTTCCTGTGTCTCAACCTCC
ACCTCCTTTAGCCTCTATGAATACTTCTTTACACGAGCACGTTCTCTCAT
CGCCGACATACGGCTGGAGATCATCCCCCTTATCTTCACCCCATGGACAA
AGCGGGCGGGGGCGAGGGCGAGAACGTTCAGTCTTCCAACGCAAACCATT
TTAAAACACTCAATGTAAAAATTAGGTTGTGGAAAAAAGTGCAATACAGA
CTATGACGCAAATAGATTGTTTCT back to topCoding sequence (CDS) from alignment at CM002461.1:682705..684628- >rna3553 ID=rna3553|Name=rna3553|organism=Nannochloropsis gaditana|type=CDS|length=1755bp|location=Sequence derived from alignment at CM002461.1:682705..684628- (Nannochloropsis gaditana) ATGGATCGGGGTCCAATGCCGCCTCCGCAAAAGCGCCATTCCACATGCGG GCAAGGCAAAGGGTATTCACATGCGAAGTCACTCATGGCTCCATCAACAT CCCACGTATTTGTCAAGCGACGGAACTTATTCCTGCAGACCTTCGACGAG CAGGGTGAACTTCAAGAAGAAGAGAGCACAAGTCTACGGCACAACGCTTT CGAGGTTAAAAACGACTACAGTCAACATTTTCTTCAGACTCGCGAACGAC CCCAGAACTTCATTAGGGATGTAACGGTTGAGGATGGATTTGCTGAATAT CCCAAGCTGGCAAAGTTACTTTCTGCAAAGCAGCACATTGTCGAGACCCG CAAAACGCCTGCGATGTATGTGAAGGCCGACCTCCGAACATTTGATCTGC GGAGCCTAGGCACCAAATTTGACATTATATATATTGATCCACCTTGGGAG GAATACACGCGTCGAGCCGCGCCCTTTGTACTGAATGGCAAGCCGTCTGT GTGCTCGGAGACATGCGATGCGTCTTTGCAGCTGGACGAGGTATGGGGGC ACGAAGATTTGGAGTCCCTGCCTATTGACGAAATTGGTGAGTTGCCTAGT TTTGTGTTCCTGTGGTGCGGTTCAGGGGGGCGCATCACAGAAGGGTCAGC GCAAGGGGCCTTGCACGTTGAAGATGGTAGGCGTTTGCTTAAGAAGTGGG GGTATCGGCGATGCGAGGAGATTTGCTGGGTGAAGACGAACAAGCATTGT CAACACTCTCAGCCAGAATTATCCACCTCCGCAACAAGCTTATTTGTACG TACCAAAGAGCATTGCCTTATGGGTATCAAAGGCTCAGTACGTCGTAATC GAGATGGGCACATAATCCATTGCAACGTCCACACGGATCTTGTAGTAGGA GAACAACCCATCGACCCGCTTTCCACAGCAAAACCTGAAGAAATTTACAC GATAATGGAGCAGTTTTGTTTAGGTCGGCGACGTCTGGAGCTGTTTGGAT GCTCGCGTAACATTCGGCCAGGCTGGGTGACAGTTGGTAAGGATGTGCCG GGCACGACGTATGACGCGAGGACATATTCGAGATTGATGGAAGAGCCGGG CTTGAATCCAGATGGGACAATGTGTGCTGGTCACTTGGTAGGGTCTACCG TCCTCATTGAAGATCTTCGACCTAAAACACCTCCACGAGAGCAGCGCGAA CGAGAAGCGGCCATGGGAATGCTTCGTAAAGCAGTCCTGAGAGGACGAAT GGATTCACTATGCAGGTCCTCGCCCAGGCCCCGTAGCCGCACTGTCCCAA GTGTCAGCCCCCAATACGTGCAATCGCTCCATTTCAATAAACACCAAAAG CATCCTGAGTGGGAGCAGTATGCTCAACAGCAGGCGGTTCAGGGTCAATT TTGGCATATATACGAGAATGGCTTTCACAATGAGGGTCAATACCAAGGTT TTGGAATCTACGACGAAACGTCGATAAATCTAAGTTCCTTTGACCACTCC GAGCATCATCGAGAAGAGCAGCATGTCTCTTTTGTCTCGCCTTTCACGTA TCCATCCGACCGAAATGGCTTTTTGCCGCCGTTTCCTGTGTCTCAACCTC CACCTCCTTTAGCCTCTATGAATACTTCTTTACACGAGCACGTTCTCTCA TCGCCGACATACGGCTGGAGATCATCCCCCTTATCTTCACCCCATGGACA AAGCGGGCGGGGGCGAGGGCGAGAACGTTCAGTCTTCCAACGCAAACCAT TTTAA back to top
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