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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100010g111.6203.mrna |
| Orig protein id | gnl|cribi|Naga_100010g111.6203 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:673352..674906 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3549 ID=rna3549|Name=rna3549|organism=Nannochloropsis gaditana|type=mRNA|length=988bp
TCTGGAACGGGAAAGTAGAGGGTGACTATGGTCCGTCTGGCACTTCCGGA
GGCTCCCCCCGGCGTCCCCGGCGAGGGCGAGAGGGACAGGCGATACGAGG
CCACTGATCGACTCACATGTCAGGGAACTGACGGGGTTTCCGACATACAG
CGGCGACATACACCTTTGGCCTTCCTTATTCGCAGCAGCTTCGTGTTACA
TCGACGAGCAGTGCGAGTGAGTCGTATCCTGCGGAGTGGTCCAGTCGCCC
GGAGGAGGGCCCGCCTGGCCGCGCTTTGACTTGTTGTACGTGCTCGTCCC
GCGGACAAAGCTCTTCGCACATCCACGATGGTAGTATCACCAGTGCCGCC
AGAAGAGGTGTTGCCTGAGTATCATGGCTTTCCGCCTTTCTTTACGCTGC
AACCTGTCCTGGAGACTCGGAAAATGCAGCTAAAGCTGTGGCGTGAACTG
GTACTAAAATGGCACCAGGCAAAGGGTGTCCAGATTTTGAAGTTGAACGA
GTGGCCGCTTTTTGCCAATCCCGCCATCAACCGCACCTTACCATTGGATG
GGCGACGTGAAGTAGTCCAAAGCCTGGTTAGTAGCGGCCATGCAGAGTGG
AAGGACGATTCTAGGACCACGGCACTCGTTCTCTGGCGCTCCGCTCAGGA
GGTCGCTGCCTCCATCCTGACCTTCATCCGCGACAATGGCATGGCCGGCA
ATGTATATACCGTGTATGAGCTGCGTGCCGGGGACGAAATCACGGTTGGC
GCCGATTTCCATGGAACGGAACCCACAATATTTCGGCGGGCATTGGAGAT
TCTGGAGCGCCAGGGGAAGGCAGCCTTGTTTAAAGGATCATCCGAGGAGG
GGGACGGAATTAAATTTGTTGCAGACGCATAGACAGGGCATAGAAAGAAA
ATGTTATGTAAATTGCATTTAAATTCGTGAAAATGTAGGGAAGCGGTCTT
TACGTCTTTCCTTCTACTTTCCATGGCCGCTATCTTCC back to topprotein sequence of rna3549 >rna3549-protein ID=rna3549-protein|Name=rna3549|organism=Nannochloropsis gaditana|type=polypeptide|length=390bp
MAFGPEGDMVLVGLTNGDCSVYDLRKPELPVRTVHAFPGTPVRALAVQQQ
ARRRTEATSPLKTRPLPQSASPGAFPSSEASRTTVHVPSRKATQEGLDPT
LPMGPAGDSAAVSLSSAASTSSSSPALRHKGNGSGPAPTRPLAPPSPPSH
PPVAPSSSPSTRPALPPLAAPGGSGAQDSSGSLSSLPLPAAYSDVDRPTP
SSGPSLVAQHCRDSGPTAAPPGGGQSKKSSQDDGIPTLAPALCDPSPPAA
SAVDGPSREGISTRQGLLWRNKPWPSASSSPSSVGGSTPLRPATLPADAT
VAAAASGESLSRESSPEARLLESKVQGMVDDLREDLARDLRGLHLEMMRT
SEGSQAAMQRLVSAMEALVEENRGLRREVQELQQQMEIPL back to topmRNA from alignment at CM002461.1:673352..674906- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3549 ID=rna3549|Name=rna3549|organism=Nannochloropsis gaditana|type=mRNA|length=1555bp|location=Sequence derived from alignment at CM002461.1:673352..674906- (Nannochloropsis gaditana)
GGGGGCCTGCCTGACATCCCTGCAGGGGCAGCACCAGGCGGCGATTAGCG
CTGTCATGGGCTCCCCTGTGAGCGACAAGCTCCTGGCGACTGCGGGCCAG
GACCGGCGCCTGGTGCTGCACGACATCCTCCGGGGCCGCCCGCTGCGCGA
GGTCAAGGTACGTCCTCGCGACGGGCAGTTGCACGCCCGGCTTTCTGTCT
CACGCTTGCTTCTCGTCCTCCTTCCCCCCTTTTTCCCGCCACCCAGGCCG
TCGCCCCCCTGACCGCCATGGCCTTCGGCCCGGAGGGTGACATGGTCCTG
GTCGGCCTCACCAACGGCGACTGCTCCGTCTACGACTTACGGAAACCGGA
GCTCCCCGTCCGCACCGTCCACGCCTTCCCTGGCACCCCTGTGCGCGCCC
TGGCGGTCCAGCAACAGGCCCGGCGCCGGACCGAAGCGACCTCCCCGCTC
AAGACGAGACCCTTGCCGCAGAGCGCCTCCCCTGGGGCCTTCCCCTCCTC
GGAAGCGAGCAGGACAACGGTTCATGTGCCCTCGCGCAAGGCGACTCAAG
AGGGGCTTGACCCCACCCTGCCGATGGGACCCGCCGGCGACTCCGCCGCC
GTCTCGCTCTCAAGCGCTGCCTCCACCTCGTCCTCCTCCCCCGCCCTCAG
ACACAAGGGCAACGGGTCGGGCCCCGCACCGACACGCCCCCTAGCCCCGC
CCAGTCCCCCCTCCCATCCTCCTGTCGCCCCCTCTTCCTCGCCATCTACT
CGTCCCGCTCTTCCTCCCTTGGCTGCCCCGGGCGGCTCGGGCGCGCAGGA
CTCCTCAGGATCGCTTTCCTCGCTCCCTTTGCCTGCGGCGTATTCAGACG
TGGACCGTCCCACACCAAGTTCAGGTCCCTCTCTGGTCGCTCAACATTGC
CGGGACTCAGGGCCGACCGCCGCGCCCCCTGGGGGTGGCCAGAGCAAGAA
GTCGTCGCAGGACGACGGCATTCCAACCCTCGCGCCCGCCCTCTGCGACC
CCTCCCCGCCCGCCGCCAGCGCTGTGGACGGGCCCAGTCGGGAGGGCATC
AGCACACGTCAGGGCCTCCTGTGGCGGAATAAGCCCTGGCCCTCGGCGTC
TTCCTCCCCATCCTCTGTCGGCGGGTCCACGCCCCTGCGACCGGCTACCC
TCCCCGCGGACGCGACGGTCGCTGCAGCTGCATCCGGGGAAAGTCTCAGC
AGGGAGTCCAGCCCCGAGGCTCGACTCCTTGAGAGCAAGGTGCAGGGCAT
GGTGGACGATCTGCGGGAAGACTTGGCCCGGGACCTTCGCGGCCTCCACT
TGGAAATGATGCGCACGTCCGAGGGGAGCCAGGCGGCGATGCAGCGACTG
GTCTCGGCCATGGAGGCCCTGGTCGAGGAGAACCGAGGGCTACGGAGGGA
GGTGCAAGAGCTGCAGCAGCAGATGGAGATCCCTTTATAAGAGAGGACAT
GTGTAGATTGAAAGAAATGATTACTGTTGGCGGAGAGATAAATGGGAAGA
TAGCGGCCATGGAAAGTAGAAGGAAAGACGTAAAGACCGCTTCCCTACAT
TTTCA back to topCoding sequence (CDS) from alignment at CM002461.1:673352..674906- >rna3549 ID=rna3549|Name=rna3549|organism=Nannochloropsis gaditana|type=CDS|length=1173bp|location=Sequence derived from alignment at CM002461.1:673352..674906- (Nannochloropsis gaditana)
ATGGCCTTCGGCCCGGAGGGTGACATGGTCCTGGTCGGCCTCACCAACGG
CGACTGCTCCGTCTACGACTTACGGAAACCGGAGCTCCCCGTCCGCACCG
TCCACGCCTTCCCTGGCACCCCTGTGCGCGCCCTGGCGGTCCAGCAACAG
GCCCGGCGCCGGACCGAAGCGACCTCCCCGCTCAAGACGAGACCCTTGCC
GCAGAGCGCCTCCCCTGGGGCCTTCCCCTCCTCGGAAGCGAGCAGGACAA
CGGTTCATGTGCCCTCGCGCAAGGCGACTCAAGAGGGGCTTGACCCCACC
CTGCCGATGGGACCCGCCGGCGACTCCGCCGCCGTCTCGCTCTCAAGCGC
TGCCTCCACCTCGTCCTCCTCCCCCGCCCTCAGACACAAGGGCAACGGGT
CGGGCCCCGCACCGACACGCCCCCTAGCCCCGCCCAGTCCCCCCTCCCAT
CCTCCTGTCGCCCCCTCTTCCTCGCCATCTACTCGTCCCGCTCTTCCTCC
CTTGGCTGCCCCGGGCGGCTCGGGCGCGCAGGACTCCTCAGGATCGCTTT
CCTCGCTCCCTTTGCCTGCGGCGTATTCAGACGTGGACCGTCCCACACCA
AGTTCAGGTCCCTCTCTGGTCGCTCAACATTGCCGGGACTCAGGGCCGAC
CGCCGCGCCCCCTGGGGGTGGCCAGAGCAAGAAGTCGTCGCAGGACGACG
GCATTCCAACCCTCGCGCCCGCCCTCTGCGACCCCTCCCCGCCCGCCGCC
AGCGCTGTGGACGGGCCCAGTCGGGAGGGCATCAGCACACGTCAGGGCCT
CCTGTGGCGGAATAAGCCCTGGCCCTCGGCGTCTTCCTCCCCATCCTCTG
TCGGCGGGTCCACGCCCCTGCGACCGGCTACCCTCCCCGCGGACGCGACG
GTCGCTGCAGCTGCATCCGGGGAAAGTCTCAGCAGGGAGTCCAGCCCCGA
GGCTCGACTCCTTGAGAGCAAGGTGCAGGGCATGGTGGACGATCTGCGGG
AAGACTTGGCCCGGGACCTTCGCGGCCTCCACTTGGAAATGATGCGCACG
TCCGAGGGGAGCCAGGCGGCGATGCAGCGACTGGTCTCGGCCATGGAGGC
CCTGGTCGAGGAGAACCGAGGGCTACGGAGGGAGGTGCAAGAGCTGCAGC
AGCAGATGGAGATCCCTTTATAA back to top
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