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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100010g108.6190.mrna |
| Orig protein id | gnl|cribi|Naga_100010g108.6190 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:667471..669307 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3547 ID=rna3547|Name=rna3547|organism=Nannochloropsis gaditana|type=mRNA|length=2564bp
AACACGATGCAGAAACGTTTGCCTGTACCACGTCGTTATATTTTCTACGA
CGAAGTGGATGATGGTGTGGGCATGTTATGGTGGTTTTCGGCTTGGATTA
TCACGCCGCTGCCTCGATTAGGACCCCGTCCAGCATTAGAACGATCTTAT
CTACGAGTTTGCGCTCTCCCCCCCTCAACCAGACTTTCGAAACATTTCCA
GCGGCCGTGGGAGGCGGCGGAGGCTCATGCTCCAGCCAACCTTCAGAACA
CTGCTGGTGCTGATATCTCTCGTTGTTGCCGTGTCTGCCTCCACGCTCAC
TCCCGATCCACTAGCTCCGCTCCGAGGCCTGGCACCAAAACGCGACGACC
GCAATGGTCAGGATGCAGTATTGCCGGAGTCGGACCTGAGTAGCCCCGAT
CGCAAGATCTGGATTATCACCACGGCCAGCCTCCCTTGGATGACCGGGAC
CGCCGTCAATCCCCTTCTGCGTGCTGCATACTTGTCGCGAGGCCGACCGG
CTGGGAAAGTCACCCTTGTGGTGCCATGGTTGGACGAGGACGACCAGAAA
GTAGTCTATCCGCACGGGAAGACATTCCGAAGGCCGGAAGATCAGGAGCG
TTACATTCGGGAGTGGCTCGGCCATCGCGCGGGTCTGGGCGCGGAGGCCA
AAAATCTGCGGATTCAATTCTACTCCGGCCGTTACCATCCTGAGCTGGGG
TCGATTTTCTCCGTGGGGGATGTGCCGGCGCTGATCCCGGACGAGGACGC
GGACGTGTTGATCCTGGAGGAGCCCGAGCACTTGAACTGGTACCGGGCCC
CCGGAGTGCCCTGGACAAGGAAGTTCCGGCACGTGGTGGGCATCTGCCAC
ACCAACTACCTGGTCTACAGCAAGTCCATACAGGGCGGGAGCATGAAATC
GGCCTTCTTGTTCTTCATGAACCAGTGGATGTGCCGCGCCTACTGCCACA
AGGTCATCAAGCTCTCAGGGGCCCTGCAGCGCTTCGCGCCTGGAAAGGAG
GAGGTTGAGAACGTGCACGGCGTCAGGCGAGAGTTTCTGGAGGCGGGAGC
CAGTGTCCGAGGGTCGGAGATGGAGGGCGCGTACTTCATTGGGAAGATGC
TGTGGCCCAAGGGGATGGACCGGCTGATCCCCATGATGGTCTATGCGCGC
GAACGCGACGGGAGGAGCTTCAAGATGGACGTATATGGCTCGGGGCCGGA
CGAGGAGGAAATCAAGCGGAAGGTGACGGCCCGCTCTCTGGACATCACTT
TCCACGGTGCCGTGGACCACGCCCAGCTCACCCACTACAAGGTCTTTATC
AACCCCTCCATCTCCGAGGTCCTATGCACCACCGTGGCGGAGGCACTGGC
CATGGGCAAATTCGTGATCATCGCCGCACACCCGTCCAACGAATTTTTCA
TGCGTTTCACCAACTGTCTGACCTTCCGGAGCAAGGAGGAATTCGCCACT
CAGGTGCTGTGGGCGCTCGCCCATGTCCCCGCCCCCCTGTCGGCGGAGGA
GCGCGAGAGTTTGACGTGGGAGGCGGCGACCCGACGACTCCTGAAAGCGT
CGCTGGTGACCGTGGGCACAGACTCGCATTCGAAGGTGGACAAGGCGCTG
GAAAAGGCGCACACCTGGGTCTCCAAGGGGGAGAGGGGAGATCGACTACG
GCGGATAGCAGGAGGCGATATCATCGCCGATGAAGCCCCCCCCGGACCCA
GACATTACGCGAACCCGCCCACAGCCTATGAGTGCATGGCGGAAGCCGGA
GCAAGGGACGCGGAAGGTCGGCTGGCACGGGCGGCGGAGGCAGCTGTGGC
AGCAGCGGGCATGCACTCTAAAGTGCCTTGGCGGGGGGCCCACGCGGGGC
AGGGGTTGGGACTAGGGAGGAAGGCATCGGTGCCGTCAGAGTGCTGCGGG
GACCGGGATTGTCAGGCTTTGGCGGGGGCTGGTTTTGGGGGGGCTGGGAA
GCCCTCTACGGGTGCCCCTCCGGCATCGTCTAGTCCGCCGTTCACGGGAG
CGGTGACCGGGTCGAGGGGCGCGGTCGGGGGGAAGTCATGATAAAGACAC
AGGCGTGCATTAGTTTGATTCGATAGTTTTATTGGCTTTATGACAGTAGT
ACGTTACGTGCCGGGCCCTATTTGTTGATACTACGTGGGAAATTACTACA
GGAGGCAATTACCCAGTCCTGAACGGCCGTGGACGTGCGATGACAGAAGA
ATCAGAGCGCGCAGATAGTGGGAGATGCCGCCGACGGGAGACGTAATGTC
TTGCGTGGTGAGGCGACGCGGAAGCAAATTGTAAATGATAAATGAAATTT
GAGGAGTAGACTGGTGTGGGGGGGAACTGGAGGGCATAAAGCGATGCGAA
CGGTCTGAGGTAGCCGGTGAAACAGCGTTAAAAAGAACGTTACTAAGATG
ACTCAAGGAGTTGCACGTTGTTGAGAGCTCAGTTGCTCTGTGATGAGGGC
AATAAATGTGTGAGATGTTCATTCGAAAACTGGTGGAACGAACAAATGAA
TACCTTGTGTCGAGATGGGTCTACAAAGCGTCCTTGCGAGCCACGATTTG
GAATGTCTCAGACC back to topprotein sequence of rna3547 >rna3547-protein ID=rna3547-protein|Name=rna3547|organism=Nannochloropsis gaditana|type=polypeptide|length=453bp
MRPVYYPPFLLTLPCARLHRQSNVSNQVEMPPKKSSLKSAAKEEAIREQQ
KRISERTKSLSKALKAAPTRDEDAMDVDEEGGERQEKEKGRARGRPRSAG
SVKSMDSETTSTRSSGTSRSKSKTKTSSAVKRKSVSPVERLTKKQAIEDA
SNAIKARSNAHSSLMASSSSAFSHRKVSASVQATAPARGRGIPSKRLGAV
KPVQLRAKEEEEEEEEAEEEEEVVIAPWRSARHSVLRVSALTRRRVAVPL
AASPQPPGRARADRLRPEEELDVAKEQATENAVKPMGVLLRLGYAMFRLV
GYAVVILTVAFTLHLSFEAYHVMTPLCFYDSYSDGKVLSGQSGKTCKTVV
PCPPLFLCHGGQIRGLAGMIPEKVNDSASISSESQTEVPEHVKEGLSLNA
QRNSPDEKDQLQDAGEEEGGMGLEEKGNRDSPEVDWKAEEEEENEREGEE
EER back to topmRNA from alignment at CM002461.1:667471..669307- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3547 ID=rna3547|Name=rna3547|organism=Nannochloropsis gaditana|type=mRNA|length=1837bp|location=Sequence derived from alignment at CM002461.1:667471..669307- (Nannochloropsis gaditana)
TAAGATATGGGCCGGGAGGCTAGCTCCCGCCCTCCAGCCCCGCAGCCCGC
CGCATGCGACCTGTCTACTACCCACCATTCTTACTCACGTTGCCGTGCGC
ACGACTCCACAGGCAAAGTAACGTGTCGAATCAAGTAGAGATGCCTCCCA
AGGTGCGTGCACCGTTAAGGGAGGGATTTCTTACGGTCAAGTGATCGCCT
GTCGATACTTCTCTCAATCCCACCTTAGCTGATGGCCCCGAGCCCGAACA
CCCACCCATCACATCAATTGCGTACCTTTTCCACGAATGCGCAGAAGTCT
AGCCTGAAATCGGCAGCCAAGGAGGAGGCAATCAGGGAACAGCAGAAACG
CATCAGTGAGCGGACCAAATCCCTTTCGAAGGCCCTAAAGGCGGCTCCTA
CAAGGGACGAGGACGCTATGGACGTGGACGAGGAAGGAGGAGAGCGCCAG
GAAAAGGAAAAGGGTCGCGCACGCGGCCGCCCCCGCAGCGCCGGCAGTGT
GAAGAGCATGGACTCGGAAACCACGAGCACCCGCAGCAGCGGCACCAGCA
GAAGCAAGAGCAAAACTAAGACTAGTAGCGCAGTCAAGAGGAAAAGTGTT
TCACCTGTGGAGCGTCTGACCAAAAAGCAGGCAATTGAAGATGCGAGCAA
CGCAATTAAGGCACGCAGTAATGCTCATTCCTCCCTGATGGCGAGCTCGA
GCTCTGCTTTCAGCCACCGAAAGGTTTCCGCGTCTGTACAGGCCACCGCA
CCAGCACGTGGACGGGGCATACCATCGAAGCGCCTCGGTGCTGTCAAGCC
AGTCCAGCTACGCGCAAAGGAGGAGGAGGAAGAAGAAGAGGAGGCAGAGG
AGGAGGAGGAGGTTGTGATAGCGCCTTGGAGATCTGCGCGCCACTCAGTG
CTCCGCGTGTCGGCCCTGACACGCCGGAGAGTGGCCGTACCCCTGGCTGC
GTCGCCGCAGCCACCAGGACGGGCGCGAGCAGATCGGCTCCGCCCCGAGG
AGGAATTGGATGTGGCGAAGGAGCAGGCTACTGAAAATGCTGTGAAACCG
ATGGGCGTATTGCTACGACTTGGCTACGCCATGTTCCGGCTGGTGGGGTA
CGCGGTCGTAATCTTGACGGTCGCCTTCACGCTGCATTTGTCGTTCGAGG
CGTATCATGTCATGACGCCCTTGTGTTTTTATGACTCGTACAGCGATGGG
AAGGTGTTGTCAGGGCAAAGCGGGAAAACCTGCAAGACCGTTGTGCCTTG
CCCGCCTCTGTTTCTCTGCCATGGAGGTCAGATCAGGGGCCTCGCCGGTA
TGATTCCAGAGAAGGTCAATGACAGTGCCAGCATCAGCTCGGAGTCGCAG
ACAGAGGTCCCCGAGCACGTGAAAGAGGGCCTGAGCTTGAATGCTCAGAG
AAATAGTCCAGACGAGAAAGACCAGTTGCAGGATGCGGGGGAAGAGGAAG
GAGGCATGGGGCTGGAGGAAAAGGGGAACAGAGATTCACCGGAGGTAGAT
TGGAAGGCGGAGGAGGAAGAGGAGAATGAGAGAGAGGGAGAGGAGGAGGA
AAGATGATACGGTTGATGAAGAGGGATGAAGGGAGGGAAGACGAAGAATA
AAGTGTGAAGGAGGACTGTCGGAAAGAAGCCTTTCATAGATCAAGGATCC
TTTCACGAGGAGGTATGCACTTGTTGCCGGACATGCAGAAAGGGGAGAGC
ATGGGCCGGGCGGACACGCCCTCTCGTGCACTAGGAAAGCAAAAGAAAAA
GCACACTCAACGAAGCGTAAAAGCAGGCAAGTCGTCAAAAGCATAACATG
ACATTTTCAAAGAATTTAAACACCTTTTGGTCCTCGT back to topCoding sequence (CDS) from alignment at CM002461.1:667471..669307- >rna3547 ID=rna3547|Name=rna3547|organism=Nannochloropsis gaditana|type=CDS|length=2724bp|location=Sequence derived from alignment at CM002461.1:667471..669307- (Nannochloropsis gaditana)
AAGTCTAGCCTGAAATCGGCAGCCAAGGAGGAGGCAATCAGGGAACAGCA
GAAACGCATCAGTGAGCGGACCAAATCCCTTTCGAAGGCCCTAAAGGCGG
CTCCTACAAGGGACGAGGACGCTATGGACGTGGACGAGGAAGGAGGAGAG
CGCCAGGAAAAGGAAAAGGGTCGCGCACGCGGCCGCCCCCGCAGCGCCGG
CAGTGTGAAGAGCATGGACTCGGAAACCACGAGCACCCGCAGCAGCGGCA
CCAGCAGAAGCAAGAGCAAAACTAAGACTAGTAGCGCAGTCAAGAGGAAA
AGTGTTTCACCTGTGGAGCGTCTGACCAAAAAGCAGGCAATTGAAGATGC
GAGCAACGCAATTAAGGCACGCAGTAATGCTCATTCCTCCCTGATGGCGA
GCTCGAGCTCTGCTTTCAGCCACCGAAAGGTTTCCGCGTCTGTACAGGCC
ACCGCACCAGCACGTGGACGGGGCATACCATCGAAGCGCCTCGGTGCTGT
CAAGCCAGTCCAGCTACGCGCAAAGGAGGAGGAGGAAGAAGAAGAGGAGG
CAGAGGAGGAGGAGGAGGTTGTGATAGCGCCTTGGAGATCTGCGCGCCAC
TCAGTGCTCCGCGTGTCGGCCCTGACACGCCGGAGAGTGGCCGTACCCCT
GGCTGCGTCGCCGCAGCCACCAGGACGGGCGCGAGCAGATCGGCTCCGCC
CCGAGGAGGAATTGGATGTGGCGAAGGAGCAGGCTACTGAAAATGCTGTG
AAACCGATGGGCGTATTGCTACGACTTGGCTACGCCATGTTCCGGCTGGT
GGGGTACGCGGTCGTAATCTTGACGGTCGCCTTCACGCTGCATTTGTCGT
TCGAGGCGTATCATGTCATGACGCCCTTGTGTTTTTATGACTCGTACAGC
GATGGGAAGGTGTTGTCAGGGCAAAGCGGGAAAACCTGCAAGACCGTTGT
GCCTTGCCCGCCTCTGTTTCTCTGCCATGGAGGTCAGATCAGGGGCCTCG
CCGGTATGATTCCAGAGAAGGTCAATGACAGTGCCAGCATCAGCTCGGAG
TCGCAGACAGAGGTCCCCGAGCACGTGAAAGAGGGCCTGAGCTTGAATGC
TCAGAGAAATAGTCCAGACGAGAAAGACCAGTTGCAGGATGCGGGGGAAG
AGGAAGGAGGCATGGGGCTGGAGGAAAAGGGGAACAGAGATTCACCGGAG
GTAGATTGGAAGGCGGAGGAGGAAGAGGAGAATGAGAGAGAGGGAGAGGA
GGAGGAAAGATGAATGCGACCTGTCTACTACCCACCATTCTTACTCACGT
TGCCGTGCGCACGACTCCACAGGCAAAGTAACGTGTCGAATCAAGTAGAG
ATGCCTCCCAAGAAGTCTAGCCTGAAATCGGCAGCCAAGGAGGAGGCAAT
CAGGGAACAGCAGAAACGCATCAGTGAGCGGACCAAATCCCTTTCGAAGG
CCCTAAAGGCGGCTCCTACAAGGGACGAGGACGCTATGGACGTGGACGAG
GAAGGAGGAGAGCGCCAGGAAAAGGAAAAGGGTCGCGCACGCGGCCGCCC
CCGCAGCGCCGGCAGTGTGAAGAGCATGGACTCGGAAACCACGAGCACCC
GCAGCAGCGGCACCAGCAGAAGCAAGAGCAAAACTAAGACTAGTAGCGCA
GTCAAGAGGAAAAGTGTTTCACCTGTGGAGCGTCTGACCAAAAAGCAGGC
AATTGAAGATGCGAGCAACGCAATTAAGGCACGCAGTAATGCTCATTCCT
CCCTGATGGCGAGCTCGAGCTCTGCTTTCAGCCACCGAAAGGTTTCCGCG
TCTGTACAGGCCACCGCACCAGCACGTGGACGGGGCATACCATCGAAGCG
CCTCGGTGCTGTCAAGCCAGTCCAGCTACGCGCAAAGGAGGAGGAGGAAG
AAGAAGAGGAGGCAGAGGAGGAGGAGGAGGTTGTGATAGCGCCTTGGAGA
TCTGCGCGCCACTCAGTGCTCCGCGTGTCGGCCCTGACACGCCGGAGAGT
GGCCGTACCCCTGGCTGCGTCGCCGCAGCCACCAGGACGGGCGCGAGCAG
ATCGGCTCCGCCCCGAGGAGGAATTGGATGTGGCGAAGGAGCAGGCTACT
GAAAATGCTGTGAAACCGATGGGCGTATTGCTACGACTTGGCTACGCCAT
GTTCCGGCTGGTGGGGTACGCGGTCGTAATCTTGACGGTCGCCTTCACGC
TGCATTTGTCGTTCGAGGCGTATCATGTCATGACGCCCTTGTGTTTTTAT
GACTCGTACAGCGATGGGAAGGTGTTGTCAGGGCAAAGCGGGAAAACCTG
CAAGACCGTTGTGCCTTGCCCGCCTCTGTTTCTCTGCCATGGAGGTCAGA
TCAGGGGCCTCGCCGGTATGATTCCAGAGAAGGTCAATGACAGTGCCAGC
ATCAGCTCGGAGTCGCAGACAGAGGTCCCCGAGCACGTGAAAGAGGGCCT
GAGCTTGAATGCTCAGAGAAATAGTCCAGACGAGAAAGACCAGTTGCAGG
ATGCGGGGGAAGAGGAAGGAGGCATGGGGCTGGAGGAAAAGGGGAACAGA
GATTCACCGGAGGTAGATTGGAAGGCGGAGGAGGAAGAGGAGAATGAGAG
AGAGGGAGAGGAGGAGGAAAGATGAATGCGACCTGTCTACTACCCACCAT
TCTTACTCACGTTGCCGTGCGCACGACTCCACAGGCAAAGTAACGTGTCG
AATCAAGTAGAGATGCCTCCCAAG back to top
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