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Properties
| Property Name | Value |
|---|
| Product | kinesin heavy chain |
| Orig transcript id | gnl|cribi|Naga_100010g97.6194.mrna |
| Orig protein id | gnl|cribi|Naga_100010g97.6194 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:629059..632331 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3537 ID=rna3537|Name=rna3537|organism=Nannochloropsis gaditana|type=mRNA|length=890bp
CTTTTAAGTCCATAATAATCACCTCAGCGTCTACCCAATCGCACAGGCAG
GTCACCGAAGGGGGAGTTAGATTTTGTGCTGCACCACTTCTCTGTCAGTG
ACCATGTTGGGACGTAACAGCCTGACAGGTACGGTTTTGTCCTTCAAGCC
CTCAATTATCCGGAACTTGTCCAAGAAAAGGATGGTCAACGTTGTTTTAC
TTGAAGATCTCGCCTTTCGTGGCTTTGCTGGTGAGGAGGTGGCTGTCAAG
CCAGGGTACGCTCGCAATTTCTTGATTCCAGGACGCAAGGCAGTTTATGC
AACGCATGACAACAAATTGCAACACATGGTAATGCGTTCGAATGAAGAGC
GCACGCTACTGGAAGAACGGCGAGACTTCCTTTACTTCAAGTCTCGGACC
ATGCAAAGGGCAATAACTTTCACGAGAAATGTAGCCGTCGACGGGCAAAA
GTTAGAGCACCCTTTGACAAAAGCAGACTTGGCCGCAGCTATGCGAAAGC
AGCTCAAGCGACATGTGGACGAACAAGATATTTGGTTGCCCAAGGGTTCA
GAAATAAAAATGTTGGGGGAATTGAACGTCAAGGTGGCGGTAGATGTACC
CCTACTCATGGTAGAAGAGATGCAAGAAAGTGCGCAATCAGATGGAGGGA
AAAAAAGGGAGATGTTGACAGTCAAAGTGGCTATACAGAAAGATGAGAAA
AAACGTGATAGAAGAGAAAATGGCAGTGCAGAGGTACTGGAGGAAGACAG
CGAGTAAGTAATGGCGCTTATGAAGCATGTAAAGGGCCCAGTAAAGAAAA
AATTGTAAACGCCTGTCGTATCCCTGATGTCGCCACTTGTCGCAATTATC
TAGGGTGGTTCATCTATTCGACCAAGAGTAGTACATGTAG back to topprotein sequence of rna3537 >rna3537-protein ID=rna3537-protein|Name=rna3537|organism=Nannochloropsis gaditana|type=polypeptide|length=887bp
MTIPAAKQRRSSSPVVSSLGTRRQSWLGDLQKPSRAVMDKNFSSTKSPFM
NAAPARTSTTLLSQQDGDCLESTGPSQKIKVCPKPLLLSKQQNGPEDEAT
FQSVQVVCRFRPLREEEPFEWYKAVEDSGAVSVNTSERTLNFAFDRVFGS
QATQADVYGSVRHVVLGLLDGFNGTILAYGQTGSGKTYTMMGRPEKRTNP
VYGRPESPRPSTGHSEGVGFIPRVVDDLFAMVEEFQDTIEFTICVSCVEV
YCEKVRDLLNPSRSADLKLRDDPYGGVVVMGATEIFVESQAEMHSVIEAG
QLGRVTAATGMNEESSRSHALLLVKVTQKNTETEHIRRGKLVMVDLAGSE
RIAKTRAEGLRLEEAKNINRSLTTLGMVISALVDGAPHVPYRDAKLTRLL
AESLGGNSNTCLIVCCAPELSHSQESISTLRFGERAKKVKNHAVRNEELS
IYELREQLRCALGEIERLNAALTGTTQEDKEGSQRVPVVGSDAGQCTPPA
KEDALRALVSADRPLQVATDEVFPHPATPVSIVPLLAGEQCHSQSAAFPG
GEAEPTPSPSSALDNKAGRVEGKESSLAPFMASSFATGAYSSFGNSESRG
ELTASEAHSSKLLAFLIESEREKDELRGRNQELSARILEEETAVARVLEE
QEALQTRLGEAEACLNQMMRAMGKVSQGPARSESLRADGRGHIGEGVNGA
SSPPEEVSEREQGKHTKSLGVSPAVQDDESVNHSTSVSGPMSPNLEQIYE
EKLLSVERVCTYLQDECDAQRDAFEHVNKALLNQNAQLALQKDGHVRRIF
ALEIKIQELETALCSLGRDHTENRREGAENTLRDRLGLVNLLQFPSFSLS
HTTRQAIKIIPGGRKTGGSLSGSRSKKGTGEQEMQKV back to topmRNA from alignment at CM002461.1:629059..632331+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3537 ID=rna3537|Name=rna3537|organism=Nannochloropsis gaditana|type=mRNA|length=3273bp|location=Sequence derived from alignment at CM002461.1:629059..632331+ (Nannochloropsis gaditana)
ccaGACTATAAAACAAGCCTCCCAAGATTGTCATCCACTTGATTCCCGTA
TCCTTTAATAAAAAACAGAAGGATGACGATTCCCGCGGCTAAGCAGCGCC
GCTCATCGTCTCCAGTTGTCTCTTCCCTCGGCACGCGTCGACAGAGTTGG
TTGGGCGACTTGCAAAAGCCTTCACGGGCAGTAATGGACAAGAATTTCTC
TTCAACGAAGTCACCCTTTATGAATGCAGCACCTGCACGGACATCAACAA
CCTTACTGTCTCAGCAGGATGGTGACTGTTTGGAAAGCACTGGGCCTTCG
CAAAAGATAAAGGTGTGTCCCAAgccgcttctcctctccaAACAACAAAA
TGGGCCGGAGGACGAAGCGACTTTTCAATCAGTTCAAGTAGTCTGTCGTT
TTCGACCactccgggaggaggaacccTTTGAATGGTACAAAGCAGTAGAA
GACAGTGGAGCGGTTTCTGTAAATACATCTGAGCGTACCTTGAATTTCGC
TTTCGATCGGGTTTTTGGTTCTCAGGCCACACAGGCAGACGTCTACGGTT
CTGTCCGCCACGTGGTGCTAGGTCTGCTTGATGGCTTCAACGGTACCATC
CTAGCCTACGGGCAAACTGGCAGCGGTAAAACTTACACAATGATGGGACG
GCCTGAGAAACGAACAAACCCAGTGTACGGTCGCCCGGAAAGTCCCCGTC
CTTCGACCGGCCACTCTGAGGGAGTGGGCTTCATTCCACGCGTGGTGGAT
GATCTATTTGCTATGGTTGAAGAGTTTCAGGATACGATAGAATTCACAAT
CTGTGTTTCCTGTGTAGAAGTTTATTGCGAGAAAGTACGCGATTTACTGA
ATCCTAGTAGAAGCGCAGACTTGAAGCTCCGCGACGACCCGTACGGCGGC
GTAGTTGTAATGGGAGCAACTGAGATCTTCGTGGAAAGTCAGGCTGAGAT
GCACAGTGTGATTGAGGCTGGACAATTGGGGCGCGTGACGGCGGCTACGG
GAATGAACGAAGAGAGCTCCCGTTCGCACGCCTTGCTGCTCGTAAAAGTG
ACCCAGAAGAACACGGAGACGGAGCACATCCGTCGAGGCAAGCTCGTGAT
GGTCGACTTAGCGGGCTCCGAGCGCATTGCAAAGACAAGGGCTGAGGGTC
TGCGTcttgaggaggcgaagaacaTTAATCGGTCTCTCACGACACTAGGA
ATGGTCATCTCAGCGCTGGTTGACGGCGCCCCGCACGTCCCCTATCGCGA
CGCCAAGCTAACCCGCCTGCTCGCCGAGTCACTGGGCGGTAACTCCAACA
CATGCCTGATCGTGTGCTGCGCACCCGAATTGAGCCATTCTCAGGAAAGC
ATAAGTACGTTGCGCTTCGGGGAACGGGCCAAGAAGGTGAAGAACCACGC
AGTCCGCAACGAGGAGTTGAGTATTTACGAGCTCCGAGAGCAACTCAGGT
GCGCTTTAGGCGAGATAGAGCGCCTCAACGCCGCCTTGACAGGGACTACA
CAAGAGGATAAAGAAGGTTCACAAAGGGTTCCCGTCGTAGGCAGCGACGC
GGGGCAATGTACACCCCCGGCAAAGGAGGATGCTTTACGCGCCCTTGTGT
CGGCCGACCGCCCTCTACAGGTGGCGACAGACGAGGTCTTCCCCCATCCT
GCTACGCCCGTTTCGATTGTGCCCCTTCTCGCGGGTGAGCAGTGTCATTC
ACAATCAGCAGCTTTTCCTGGCGGCGAGGCCGAGCCTACACCGTCACCGT
CATCAGCACTGGACAATAAGGCGGGAcgcgtggaggggaaggaatcGTCT
TTGGCGCCCTTTATGGCGTCGTCATTCGCGACAGGTGCTTACTCATCTTT
CGGAAATTCCGAAAGTCGAGGAGAGCTGACTGCCTCTGAAGCACATTCAA
GCAAATTGCTCGCTTTCCTAATAGAGagcgaaagggagaaagacgagcTG
CGCGGCAGGAACCAGGAGCTAAGTGCTCGGATTCTCgaagaggagacggc
ggTTGCGCGAgtcttggaggagcaggaggctcTTCAAACGCGGCTgggcg
aggcagaggcgTGTTTGAACCAGATGATGCGGGCGATGGGAAAAGTGAGC
CAGGGGCCGGCGAGGAGCGAGAGTCTTAGGGCGGACGGGCGGGGGCACAT
AGGCGAAGGGGTAAATGGCGCGTCTTCACCTCCCGAAGAGGTATcagaaa
gggagcaaggtAAGCACACAAAGTCATTAGGAGTCTCGCCCGCTGTCCAA
GATGATGAGAGTGTCAACCACAGTACGAGTGTTTCGGGACCCATGTCGCC
TAATTTAGAGCAGATTTACGAGGAGAAGCTCCTAAGCGTAGAGCGGGTAA
GAGTAGAGGCCGGAGAGTCGGGACAGGTTGGGAATTGATTCCTGTTCTCG
GTTTAAAAGCTTTGATCTAAATTTCAGGCATTAACGTCCGAATATTATGT
GATTTCGCATGCTCTTGAGAAGTTCTTTTTGCCACACGACAAGACCGCTC
ACATGGTGTCTTACCCTTTCAATACATGCTCCAGGTCTGCACATACCTTC
AAGATGAATGCGATGCTCAGCGAGATGCATTCGAGCACGTGAACAAGGCT
CTCCTCAATCAAAATGCGCAACTCGCCTTGCAGAAAGACGGCCACGTGCG
TCGAATTTTCGCATTAGAAATCAAGATTCAGGAGTTGGAGACAGCGCTTT
GCTCTCTTGGTCGGGATCACACGGAAAATAGACGTGAAGGAGCAGAGAAT
ACCCTGCGGGACAGGCTTGGGCTTGTAAACTTGCTGCAATTTCCTTCGTT
CTCGCTCTCTCATACAACACGACAAGCAATCAAGATCATACCAGGCGGGC
GTAAGACAGGCGGTAGTTTGTCAGGGTCAAGATCTAAGAAAGGAACGGGG
GAACAAGAAATGCAGAAGGTGTGATGAGTGTCGAAGGCCGCTTTAGACAA
GGTAAGTTCAAAAGCAAAATTTTGCTATTGTTGTGTAGTAAGAAAAAGTT
GACAAACTGAAAGACACGACGGAATGGAATGAAATTGCTCTCAAGAGGAA
ACACGTCACGTTCGATGAGTAGACAATGTGTAGTATGTGTATGTTATTTC
AAAAAATAGAGCTGTGAGCGAATTACTCATTTCTTACTTTGCCTTTTGCA
CTCCTAACAGAATACTTTAAGTTCTGTGCTTTTTTGAATGTGAATTCGTT
GTTATCATCGTTATTATCACTTCTGTAATTGCGCATGAATCATACGTAGT
AGACTGAAATATAGAGGGAGTGC back to topCoding sequence (CDS) from alignment at CM002461.1:629059..632331+ >rna3537 ID=rna3537|Name=rna3537|organism=Nannochloropsis gaditana|type=CDS|length=5328bp|location=Sequence derived from alignment at CM002461.1:629059..632331+ (Nannochloropsis gaditana)
ATGACGATTCCCGCGGCTAAGCAGCGCCGCTCATCGTCTCCAGTTGTCTC
TTCCCTCGGCACGCGTCGACAGAGTTGGTTGGGCGACTTGCAAAAGCCTT
CACGGGCAGTAATGGACAAGAATTTCTCTTCAACGAAGTCACCCTTTATG
AATGCAGCACCTGCACGGACATCAACAACCTTACTGTCTCAGCAGGATGG
TGACTGTTTGGAAAGCACTGGGCCTTCGCAAAAGATAAAGGTGTGTCCCA
AgccgcttctcctctccaAACAACAAAATGGGCCGGAGGACGAAGCGACT
TTTCAATCAGTTCAAGTAGTCTGTCGTTTTCGACCactccgggaggagga
acccTTTGAATGGTACAAAGCAGTAGAAGACAGTGGAGCGGTTTCTGTAA
ATACATCTGAGCGTACCTTGAATTTCGCTTTCGATCGGGTTTTTGGTTCT
CAGGCCACACAGGCAGACGTCTACGGTTCTGTCCGCCACGTGGTGCTAGG
TCTGCTTGATGGCTTCAACGGTACCATCCTAGCCTACGGGCAAACTGGCA
GCGGTAAAACTTACACAATGATGGGACGGCCTGAGAAACGAACAAACCCA
GTGTACGGTCGCCCGGAAAGTCCCCGTCCTTCGACCGGCCACTCTGAGGG
AGTGGGCTTCATTCCACGCGTGGTGGATGATCTATTTGCTATGGTTGAAG
AGTTTCAGGATACGATAGAATTCACAATCTGTGTTTCCTGTGTAGAAGTT
TATTGCGAGAAAGTACGCGATTTACTGAATCCTAGTAGAAGCGCAGACTT
GAAGCTCCGCGACGACCCGTACGGCGGCGTAGTTGTAATGGGAGCAACTG
AGATCTTCGTGGAAAGTCAGGCTGAGATGCACAGTGTGATTGAGGCTGGA
CAATTGGGGCGCGTGACGGCGGCTACGGGAATGAACGAAGAGAGCTCCCG
TTCGCACGCCTTGCTGCTCGTAAAAGTGACCCAGAAGAACACGGAGACGG
AGCACATCCGTCGAGGCAAGCTCGTGATGGTCGACTTAGCGGGCTCCGAG
CGCATTGCAAAGACAAGGGCTGAGGGTCTGCGTcttgaggaggcgaagaa
caTTAATCGGTCTCTCACGACACTAGGAATGGTCATCTCAGCGCTGGTTG
ACGGCGCCCCGCACGTCCCCTATCGCGACGCCAAGCTAACCCGCCTGCTC
GCCGAGTCACTGGGCGGTAACTCCAACACATGCCTGATCGTGTGCTGCGC
ACCCGAATTGAGCCATTCTCAGGAAAGCATAAGTACGTTGCGCTTCGGGG
AACGGGCCAAGAAGGTGAAGAACCACGCAGTCCGCAACGAGGAGTTGAGT
ATTTACGAGCTCCGAGAGCAACTCAGGTGCGCTTTAGGCGAGATAGAGCG
CCTCAACGCCGCCTTGACAGGGACTACACAAGAGGATAAAGAAGGTTCAC
AAAGGGTTCCCGTCGTAGGCAGCGACGCGGGGCAATGTACACCCCCGGCA
AAGGAGGATGCTTTACGCGCCCTTGTGTCGGCCGACCGCCCTCTACAGGT
GGCGACAGACGAGGTCTTCCCCCATCCTGCTACGCCCGTTTCGATTGTGC
CCCTTCTCGCGGGTGAGCAGTGTCATTCACAATCAGCAGCTTTTCCTGGC
GGCGAGGCCGAGCCTACACCGTCACCGTCATCAGCACTGGACAATAAGGC
GGGAcgcgtggaggggaaggaatcGTCTTTGGCGCCCTTTATGGCGTCGT
CATTCGCGACAGGTGCTTACTCATCTTTCGGAAATTCCGAAAGTCGAGGA
GAGCTGACTGCCTCTGAAGCACATTCAAGCAAATTGCTCGCTTTCCTAAT
AGAGagcgaaagggagaaagacgagcTGCGCGGCAGGAACCAGGAGCTAA
GTGCTCGGATTCTCgaagaggagacggcggTTGCGCGAgtcttggaggag
caggaggctcTTCAAACGCGGCTgggcgaggcagaggcgTGTTTGAACCA
GATGATGCGGGCGATGGGAAAAGTGAGCCAGGGGCCGGCGAGGAGCGAGA
GTCTTAGGGCGGACGGGCGGGGGCACATAGGCGAAGGGGTAAATGGCGCG
TCTTCACCTCCCGAAGAGGTATcagaaagggagcaaggtAAGCACACAAA
GTCATTAGGAGTCTCGCCCGCTGTCCAAGATGATGAGAGTGTCAACCACA
GTACGAGTGTTTCGGGACCCATGTCGCCTAATTTAGAGCAGATTTACGAG
GAGAAGCTCCTAAGCGTAGAGCGGGTCTGCACATACCTTCAAGATGAATG
CGATGCTCAGCGAGATGCATTCGAGCACGTGAACAAGGCTCTCCTCAATC
AAAATGCGCAACTCGCCTTGCAGAAAGACGGCCACGTGCGTCGAATTTTC
GCATTAGAAATCAAGATTCAGGAGTTGGAGACAGCGCTTTGCTCTCTTGG
TCGGGATCACACGGAAAATAGACGTGAAGGAGCAGAGAATACCCTGCGGG
ACAGGCTTGGGCTTGTAAACTTGCTGCAATTTCCTTCGTTCTCGCTCTCT
CATACAACACGACAAGCAATCAAGATCATACCAGGCGGGCGTAAGACAGG
CGGTAGTTTGTCAGGGTCAAGATCTAAGAAAGGAACGGGGGAACAAGAAA
TGCAGAAGGTGTGAATGACGATTCCCGCGGCTAAGCAGCGCCGCTCATCG
TCTCCAGTTGTCTCTTCCCTCGGCACGCGTCGACAGAGTTGGTTGGGCGA
CTTGCAAAAGCCTTCACGGGCAGTAATGGACAAGAATTTCTCTTCAACGA
AGTCACCCTTTATGAATGCAGCACCTGCACGGACATCAACAACCTTACTG
TCTCAGCAGGATGGTGACTGTTTGGAAAGCACTGGGCCTTCGCAAAAGAT
AAAGGTGTGTCCCAAgccgcttctcctctccaAACAACAAAATGGGCCGG
AGGACGAAGCGACTTTTCAATCAGTTCAAGTAGTCTGTCGTTTTCGACCa
ctccgggaggaggaacccTTTGAATGGTACAAAGCAGTAGAAGACAGTGG
AGCGGTTTCTGTAAATACATCTGAGCGTACCTTGAATTTCGCTTTCGATC
GGGTTTTTGGTTCTCAGGCCACACAGGCAGACGTCTACGGTTCTGTCCGC
CACGTGGTGCTAGGTCTGCTTGATGGCTTCAACGGTACCATCCTAGCCTA
CGGGCAAACTGGCAGCGGTAAAACTTACACAATGATGGGACGGCCTGAGA
AACGAACAAACCCAGTGTACGGTCGCCCGGAAAGTCCCCGTCCTTCGACC
GGCCACTCTGAGGGAGTGGGCTTCATTCCACGCGTGGTGGATGATCTATT
TGCTATGGTTGAAGAGTTTCAGGATACGATAGAATTCACAATCTGTGTTT
CCTGTGTAGAAGTTTATTGCGAGAAAGTACGCGATTTACTGAATCCTAGT
AGAAGCGCAGACTTGAAGCTCCGCGACGACCCGTACGGCGGCGTAGTTGT
AATGGGAGCAACTGAGATCTTCGTGGAAAGTCAGGCTGAGATGCACAGTG
TGATTGAGGCTGGACAATTGGGGCGCGTGACGGCGGCTACGGGAATGAAC
GAAGAGAGCTCCCGTTCGCACGCCTTGCTGCTCGTAAAAGTGACCCAGAA
GAACACGGAGACGGAGCACATCCGTCGAGGCAAGCTCGTGATGGTCGACT
TAGCGGGCTCCGAGCGCATTGCAAAGACAAGGGCTGAGGGTCTGCGTctt
gaggaggcgaagaacaTTAATCGGTCTCTCACGACACTAGGAATGGTCAT
CTCAGCGCTGGTTGACGGCGCCCCGCACGTCCCCTATCGCGACGCCAAGC
TAACCCGCCTGCTCGCCGAGTCACTGGGCGGTAACTCCAACACATGCCTG
ATCGTGTGCTGCGCACCCGAATTGAGCCATTCTCAGGAAAGCATAAGTAC
GTTGCGCTTCGGGGAACGGGCCAAGAAGGTGAAGAACCACGCAGTCCGCA
ACGAGGAGTTGAGTATTTACGAGCTCCGAGAGCAACTCAGGTGCGCTTTA
GGCGAGATAGAGCGCCTCAACGCCGCCTTGACAGGGACTACACAAGAGGA
TAAAGAAGGTTCACAAAGGGTTCCCGTCGTAGGCAGCGACGCGGGGCAAT
GTACACCCCCGGCAAAGGAGGATGCTTTACGCGCCCTTGTGTCGGCCGAC
CGCCCTCTACAGGTGGCGACAGACGAGGTCTTCCCCCATCCTGCTACGCC
CGTTTCGATTGTGCCCCTTCTCGCGGGTGAGCAGTGTCATTCACAATCAG
CAGCTTTTCCTGGCGGCGAGGCCGAGCCTACACCGTCACCGTCATCAGCA
CTGGACAATAAGGCGGGAcgcgtggaggggaaggaatcGTCTTTGGCGCC
CTTTATGGCGTCGTCATTCGCGACAGGTGCTTACTCATCTTTCGGAAATT
CCGAAAGTCGAGGAGAGCTGACTGCCTCTGAAGCACATTCAAGCAAATTG
CTCGCTTTCCTAATAGAGagcgaaagggagaaagacgagcTGCGCGGCAG
GAACCAGGAGCTAAGTGCTCGGATTCTCgaagaggagacggcggTTGCGC
GAgtcttggaggagcaggaggctcTTCAAACGCGGCTgggcgaggcagag
gcgTGTTTGAACCAGATGATGCGGGCGATGGGAAAAGTGAGCCAGGGGCC
GGCGAGGAGCGAGAGTCTTAGGGCGGACGGGCGGGGGCACATAGGCGAAG
GGGTAAATGGCGCGTCTTCACCTCCCGAAGAGGTATcagaaagggagcaa
ggtAAGCACACAAAGTCATTAGGAGTCTCGCCCGCTGTCCAAGATGATGA
GAGTGTCAACCACAGTACGAGTGTTTCGGGACCCATGTCGCCTAATTTAG
AGCAGATTTACGAGGAGAAGCTCCTAAGCGTAGAGCGGGTCTGCACATAC
CTTCAAGATGAATGCGATGCTCAGCGAGATGCATTCGAGCACGTGAACAA
GGCTCTCCTCAATCAAAATGCGCAACTCGCCTTGCAGAAAGACGGCCACG
TGCGTCGAATTTTCGCATTAGAAATCAAGATTCAGGAGTTGGAGACAGCG
CTTTGCTCTCTTGGTCGGGATCACACGGAAAATAGACGTGAAGGAGCAGA
GAATACCCTGCGGGACAGGCTTGGGCTTGTAAACTTGCTGCAATTTCCTT
CGTTCTCGCTCTCTCATACAACACGACAAGCAATCAAGATCATACCAGGC
GGGCGTAAGACAGGCGGTAGTTTGTCAGGGTCAAGATCTAAGAAAGGAAC
GGGGGAACAAGAAATGCAGAAGGTGTGA back to top
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