rna3528, rna3528 (mRNA) Nannochloropsis gaditana

Overview
Namerna3528
Unique Namerna3528
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1056
Alignment locationCM002461.1:610509..610924 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100010g86.6191.mrna
Orig protein idgnl|cribi|Naga_100010g86.6191
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:610509..610924 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100010g86gene3398Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3528rna3528-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27221.1cds3519Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3528 ID=rna3528|Name=rna3528|organism=Nannochloropsis gaditana|type=mRNA|length=1056bp
ATGGTCGCCTCATTCTTCACCACGGGGTTCTCCCCTCTCATGGCGCCTAA
GGCTGTCCTTTTGGGTGTCGGCTCCAAATACGTAGCGCATCGTAGTCCTT
CAGAGAAGAAGGTGCTGGCGACGTCTGCCGCGAAGGGTGCCTGGGACGCG
CGCTACCAACACGCCGTGCCTCACACGACCGACTACTATCTGAAGTGCTG
CCTCGGTGGCGTGCTTTCTTGCGGGCTTACGCATCTGGCTGTGACCCCCC
TTGACGTAGCCAAGTGCAACATGCAGGTAGACCCCGCAAAGTACAAAGGC
CTTTTCCCCTCCATCAAGCTAATCATGGCCGAGGAGGGCGCCGTGGGAAT
CTGGAAAGGATGGCTGCCCACGGCAATCGGATACTCTCTTCAGGGCTGCT
TTAAGTTCGGGCTTTACGAGTTCTTTAAGGACTTTTACTCCAACTTAGCG
GGCGAAGAGGCGTCTTATGCATACCGGGGGGTCATCTACCTGGCGGGCTC
TGCCTCGGCTGAGCTCTTCGCGGACGCCGCGCTCTGCCCGTTGGAGATGA
TCAAGGTCAAAGTTCAGACCTCAGCCAAAGGCACCTTTCCCACCGAATTC
TTCGCCGCCCTTACCGCCATGGGAGCTGACAAGGCCAATACAAAATTTCC
CTTTGGCTCCCTGGTCCCCCTCTGGTCTCGCCAGATCCCTTACACCATGG
CCAAGTTTTTCTTCTTTGAGAAGGTCGTGGAGGCCTTCTACATGCACGTT
TTCACAGCGCCTAAAGAAAGCTATGGAAAGAGCACACAGTTGGGCATCAC
CTTCGCATCCGGATATCTTGCCGGTGTGATTTGCGCCATCGTCTCCCACC
CGGCAGACACGGTTGTCTCCAAAATGGGCAAGGGCAACAAGACTGCGGGG
CAGATTCTGTCTGAACTCGGACCTATGGGAGTATGGGGGGGCCTGGGGAC
GCGTATCATTATGATCGGTACACTGACAGGCCTGCAATGGTGGATTTATG
ACTCGTTCAAGACGGCCTTTGGTCTCGGGACATCTGGGCCGGCTGTGAAG
AAGTAA
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protein sequence of rna3528

>rna3528-protein ID=rna3528-protein|Name=rna3528|organism=Nannochloropsis gaditana|type=polypeptide|length=102bp
MVFDDCVGRRAWVEVTCRSHSRPIIGATATNLHRIAPFLLWTFLKSFDGA
LFRAFLCLEKKWINGSPEAIHKRINSWVSSLIANSKIRSLRSKFPLKQNR
ET
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mRNA from alignment at CM002461.1:610509..610924+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3528 ID=rna3528|Name=rna3528|organism=Nannochloropsis gaditana|type=mRNA|length=416bp|location=Sequence derived from alignment at CM002461.1:610509..610924+ (Nannochloropsis gaditana)
ATGGTTTTTGATGACTGCGTGGGGAGACGGGCCTGGGTGGAGGTGACATG
TCGTTCACATAGTCGTCCCATCATCGGTGCTACAGCGACGAACCTACACC
GCATTGCTCCCTTTTTGCTGTGGACATTTCTTGTGGGTGGGAAAAGCTCA
AGGTCATCAGCAAGCCGCATAAGCTGTGGAGAAGAGTTTTGACGGTGCTT
TGTTTCGAGCTTTTCTGTGcttggaaaagaaatggattAACGGCTCGCCT
GAAGCAATCCACAAACGGATAAATTCTTGGGTGAGCTCTCTCATTGCAAA
CTCCAAGATACGGTCGTTGCGTTCTAAATTCCCTCTCGTTTTGTCGCATG
AATCTTCAACAAGGAGATTAATGACGTGTTCACCCAGCTCCAAAGAAACA
AAATCGAGAGACGTGA
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Coding sequence (CDS) from alignment at CM002461.1:610509..610924+

>rna3528 ID=rna3528|Name=rna3528|organism=Nannochloropsis gaditana|type=CDS|length=927bp|location=Sequence derived from alignment at CM002461.1:610509..610924+ (Nannochloropsis gaditana)
ATGGTTTTTGATGACTGCGTGGGGAGACGGGCCTGGGTGGAGGTGACATG
TCGTTCACATAGTCGTCCCATCATCGGTGCTACAGCGACGAACCTACACC
GCATTGCTCCCTTTTTGCTGTGGACATTTCTTAAGAGTTTTGACGGTGCT
TTGTTTCGAGCTTTTCTGTGcttggaaaagaaatggattAACGGCTCGCC
TGAAGCAATCCACAAACGGATAAATTCTTGGGTGAGCTCTCTCATTGCAA
ACTCCAAGATACGGTCGTTGCGTTCTAAATTCCCTCTCAAACAAAATCGA
GAGACGTGAATGGTTTTTGATGACTGCGTGGGGAGACGGGCCTGGGTGGA
GGTGACATGTCGTTCACATAGTCGTCCCATCATCGGTGCTACAGCGACGA
ACCTACACCGCATTGCTCCCTTTTTGCTGTGGACATTTCTTAAGAGTTTT
GACGGTGCTTTGTTTCGAGCTTTTCTGTGcttggaaaagaaatggattAA
CGGCTCGCCTGAAGCAATCCACAAACGGATAAATTCTTGGGTGAGCTCTC
TCATTGCAAACTCCAAGATACGGTCGTTGCGTTCTAAATTCCCTCTCAAA
CAAAATCGAGAGACGTGAATGGTTTTTGATGACTGCGTGGGGAGACGGGC
CTGGGTGGAGGTGACATGTCGTTCACATAGTCGTCCCATCATCGGTGCTA
CAGCGACGAACCTACACCGCATTGCTCCCTTTTTGCTGTGGACATTTCTT
AAGAGTTTTGACGGTGCTTTGTTTCGAGCTTTTCTGTGcttggaaaagaa
atggattAACGGCTCGCCTGAAGCAATCCACAAACGGATAAATTCTTGGG
TGAGCTCTCTCATTGCAAACTCCAAGATACGGTCGTTGCGTTCTAAATTC
CCTCTCAAACAAAATCGAGAGACGTGA
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Synonyms
Publications