rna35, rna35 (mRNA) Nannochloropsis gaditana

Overview
Namerna35
Unique Namerna35
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length558
Alignment locationCM002455.1:104717..104988 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100568g2.695.mrna
Orig protein idgnl|cribi|Naga_100568g2.695
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:104717..104988 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100568g2gene33Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna35rna35-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30637.1cds35Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna35 ID=rna35|Name=rna35|organism=Nannochloropsis gaditana|type=mRNA|length=558bp
ATGCAAATGGAATGGGAGGTGCCAAGATGTGGATTTCATTGCCACCACGA
TCACAAGCCACAGCCTAAATTTGTTCTATCGGAATCGCATCGACGCTGCA
GTATGGCCCCGTCTTCATTGAAGCCTTTTGGTCAAAATGGCGTCCACATC
GCAGGCGCCTTGACTGACGACGAAATCAAAGAGCTAGCTCCCCGGTTTCC
GGCGTGGCTCTACCTCTGTTGCGACACAGGATCCGACACAGGCGCGCCCA
ATGGGGGTTTTCCTAGTGTTGCTCGAGGCCATGACGGGGGCAAACACGTC
CATGTGCCTGTCGATCACACAGACCTCGACATGGCCTTGACGCGTCGCCT
TCTAGGGGCATACACCACCCTCCTCCCTCCCACCGTGCGGAGTCCCCTCC
TCATCAGTTGCTATGGTCAGCGCGTCTCCCCTCGTGCTGGCACCCGAAGA
AGTGCTGGAAATTGGGCGCAGCGCGGGCCTCTCCTGTTTCAACAACCCCG
CCTTGACCGACTGGGTAGTGGCCTCTCTATACTTCATTTTGATGGGGCCG
GAACATAG
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protein sequence of rna35

>rna35-protein ID=rna35-protein|Name=rna35|organism=Nannochloropsis gaditana|type=polypeptide|length=70bp
MEKAGLVEPSLPGEEWLMECDEVLVTMSSCAGRRWEVFCALGIVRLRRWE
FRIPMNGGNILSNIKRGNHF
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mRNA from alignment at CM002455.1:104717..104988-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna35 ID=rna35|Name=rna35|organism=Nannochloropsis gaditana|type=mRNA|length=272bp|location=Sequence derived from alignment at CM002455.1:104717..104988- (Nannochloropsis gaditana)
ATGGAAAAGGCAGGATTGGTAGAACCCTCTCTGCCAGGGGAAGAATGGCT
TATGGAGTGTGATGAAGTACTCGTTACCATGTCTTCCTGCGCAGGGAGGA
GGTGGGAAGTATTCTGTGCTTTGGGAATTGTACGGCTTAGAAGGTGGGAA
TTTAGAATCCCCATGAATGGTGGCAACATCCTATCAAATGTATAAGAAAC
GATCAATTATTCAAAGTGATATTGAACTCCCATTTGTCGTATGACTAGAT
TAAGCGTGGAAATCATTTTTGA
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Coding sequence (CDS) from alignment at CM002455.1:104717..104988-

>rna35 ID=rna35|Name=rna35|organism=Nannochloropsis gaditana|type=CDS|length=426bp|location=Sequence derived from alignment at CM002455.1:104717..104988- (Nannochloropsis gaditana)
ATTAAGCGTGGAAATCATTTTTGAATGGAAAAGGCAGGATTGGTAGAACC
CTCTCTGCCAGGGGAAGAATGGCTTATGGAGTGTGATGAAGTACTCGTTA
CCATGTCTTCCTGCGCAGGGAGGAGGTGGGAAGTATTCTGTGCTTTGGGA
ATTGTACGGCTTAGAAGGTGGGAATTTAGAATCCCCATGAATGGTGGCAA
CATCCTATCAAATATTAAGCGTGGAAATCATTTTTGAATGGAAAAGGCAG
GATTGGTAGAACCCTCTCTGCCAGGGGAAGAATGGCTTATGGAGTGTGAT
GAAGTACTCGTTACCATGTCTTCCTGCGCAGGGAGGAGGTGGGAAGTATT
CTGTGCTTTGGGAATTGTACGGCTTAGAAGGTGGGAATTTAGAATCCCCA
TGAATGGTGGCAACATCCTATCAAAT
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Synonyms
Publications