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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100010g54.6187.mrna |
| Orig protein id | gnl|cribi|Naga_100010g54.6187 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:551503..552325 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3499 ID=rna3499|Name=rna3499|organism=Nannochloropsis gaditana|type=mRNA|length=2736bp
CGCCGATGAACTTTGAGGCTTTGCGTCAATCACAACAAATGGCTTGAAGC
TTAGTAATCACACCTGTCAGAAGTCCATGTTTTAGGGGCATCCCGAATAT
TATGTGTTCAGAGAGATATGACGCGGCTATCCACGCCGGCAGTTTTTTCA
TTCCCTGCCATGACAGAGAGGTAATATTGCAGTAGAAACGGAGATAATTG
CTACACAGTATGTGAGCTTTTTTAAGCGCTCGGTCGAAGATGGAATGGAT
ACAAGCCAAGAGTGATCAGCCTCATGCGAACGATACATTTCTTTCACCTC
CCAGATACGAACAATAATTAGAAAAGAAGTCGTGACTGCAGGGAGGCGAC
TATCGAAAAATGAGTGGAGATATCAGGGTACTTTATGTGCCAGCAAAGCC
ATGAAAATGAAATCTTGGCCTCATAACAGTATATCTCATGCAGGATTCTG
ATTTCTAACCACATAATGTAGCATTTTGACGAATTTATCGACCGGAGATG
GAGCTGTCAGACAGCAGCAATCCCTCCCCTTACATATCAGAAAACTTCTA
TAGACAAATGCTAGTATCCTTCAAGAAAGGTCACAGGCGTATCCCGACAA
GTGATCACCGCCCGAGGTCACTGGCGCAATCGCTATCCACATCTGTGCGC
CGCTTTGCTGTAACTGAATTTTTTTATGCAACCGTGGACAGAGGCTATTT
GAATAGCAATTGCTTTGGCAAAAGGTTGGATGAGCTTGGTCTAAGACACA
TCCGGAAGATTTCCCGGACGGAGTGGGATATTGTTCGGTTATTCTTTGGC
CGGCGTCGACGTTTGAGCCCACTTTTCCTCCGCCAAGAGCGGCAAAAGCT
GCATAAATTCAGACGCATGGCTCGAATCTCTCAACGGCAGTCGGTAAATC
ATTTTGATCTCGAGAACCAAATGCCTCTATATTTGACAGTGGGGAGTAAT
GTACAAGCTTACGACATCAAAAGAAACTTTCTTGGACGCGGCAAGATTTT
GACTGCCAATTATGATATAAGTCGTTACCGAATCCAGTTCGAGGATCCAA
GTCTTGGTACCATTTTGTGCGCGGACACAGAACTTTCCATACAAGGGATT
CCATCATTCACGCACAACACTTCGTCGGACCCAAGCGATGGGATTTTTCC
TACTCAGGCTGGAAACAAACATTTTTTTCAAGCATGCACAACAACAAAGG
GCTCGTCCTTTGGGCAAAGTGGTTTCGACAACATCTCATGGGCATCCTTT
TCAAAATCAATCGATTTTTCGTCTCCCGCCGACCAAGGAAAAGTAGAAGT
TGTGCAGCTTATGATTTTCACTCTACGGATGTTACATCGCAAAGAGATTT
TACTCGAAATTCTGGAAACATTCGATCGGCAAGTGAGGAAGTCATTAGAA
TCCAAGTCACCAAGGAACTCACTTCCTATGAACACTCGAAAATCTTACGG
ATCTTCAGGCGCAAATTATGGCCTTAGGGATCGCAATAAATTGTTTCATC
CTAAATCAACAGACTCAATTTCAGCGCTTCGAAACGATATTTTATGGAAC
GATTCGTCGTTATTGATTCAAGAATATCACTGGATATTCCATGCTTTTCG
ACGCTCGAATGTGGCTTTTAAGTCAGCTTTTGGTCGCTTACTTATACATG
GGAAAAGTAGATATATTTCATCGGGACAAATCGTGCCAAGGAGCTGGAAT
GCAGAGCTAGGTAAGAAGAAACGTCCGAATAATTTTGCCGATGATGTGGT
TCGCGGTGCGTGGAAGGAGTCTATATCAGCTATCAGTCATCACATTCAAA
CGGTGTCGTATGACGAAACAATCGAGGAGATACCTAGAATTTCATCGTCC
AGGGATATCGGGAAAAGAAAAGTTTTGTCAGGCCAAGACCACGTACTTCT
AAAGTCAGCGGTTGCAATGTTGTTTGTTTTGAAGGAGTGCGCAGATAAAC
AGTTCTCTCAAATGCAATCGTACGATAGGGATAAAGTGATGAGCTTCGTA
GCTCTTGAAATGGAGCGAACTCTTCTTGCCCTTCTTTTAAAAGTACAACG
TGGAGTTCTGACGATCCCGAGACTTCTACATAAAAAACGAGGCATGGATC
AATATGATACCGAGAAAGAGGAGGAGGAAAAGATAGGAACGTCACTAGAA
GCACTTGAGCTTGCAAAAGCAGCCTTGAGTGGAAAAATTGCGAGCGCCGT
CATTGCCCTTCAGCATGCAATGGCGGGCTGACAAGAATCCTGTGGTCGGA
AACTTGCGAAATATCTAGTACTCTATGAGGTCGTCTGTACCCACACAAAT
ATGTGAGTAAATGCTCAAGCCTACTGTGACGAAAGGTGTGTTTAAAGTCC
TGTATGCGCAAAGGATACGATCCTCAACGAGGTGCTATGAAGAGACATTC
TACTTGAGTTCAAAACCTCTATCAGAAAAGCTAAAATTCTGTGCGATTTC
TCTCGTTTATTTCGGAGGGCAAAAAATTCAATTCGCAGCATCACGGAACC
CTCTCAGTCATTTGGAAAATTTTTGTTAAAAAAAACTCCATGCAAAGATG
CTTTGTATGAGATTTTGAAGGTACAATGTAATTAGCACCTTTAAATTTGT
GGAGCACATGGTTGGATTGAAGATAATTTATAAAGTATGCGGAGGAAATT
GAGACTTTCCGTGTATGAGCGTACATCTCGTCAGAACCTTAATTCCTTTC
GCAAAAACAAGCTCCCCACAGGCTCTCAGTTCTTCA back to topprotein sequence of rna3499 >rna3499-protein ID=rna3499-protein|Name=rna3499|organism=Nannochloropsis gaditana|type=polypeptide|length=101bp
MTITSSIVKFIASVRLVISNLYGRITCYSPTLALHNGITTLFTCTALEIS
TIRGSYKIGSMKLSLSRARTHTCIAHTRYTNNAHLFIYVYVGYEGKYDNT
L back to topmRNA from alignment at CM002461.1:551503..552325+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3499 ID=rna3499|Name=rna3499|organism=Nannochloropsis gaditana|type=mRNA|length=823bp|location=Sequence derived from alignment at CM002461.1:551503..552325+ (Nannochloropsis gaditana)
GTCGAGAGGCGCGGGAAAAAGCGAAGAGACTGTCAAGTCTTCCCAGCTCA
TGGTAGAGTGAAACCAAATTGGACTGATACTTTTTAAATTGTAAAACACG
TTTAAGACGGAGGATAAACGTCTGCTTTTGGTTTTCGAAAGGATAGCAGA
TAATGGACGGTAGGGCCATCTCTTAGAACAACTTCATTGTGAATGACGAT
TACTTCTTCTATTGTGAAGTTTATAGCTTCTGTCCGGCTCGTGATCAGCA
ATTTGTACGGAAGAATTACCTGCTACTCTCCAACTCTTGCTCTGCATAAT
GGAATAACGACCTTGTTTACGTGCACTGCCCTCGAAATTTCTACTATACG
GGGAAGCTACAAAATCGGATCAATGAAATTGAGCCTTTCTCGCGCGCGCA
CACACACATGCATCGCACACACGCGCTACACGAACAACGCACATTTATTT
ATTTATGTATATGTGGGATATGAAGGCAAGTACGACAACACTTTGTAAAT
GAGAGTTTAGCAAGTTGGTCCTGAGATAAGCAAGTGGCCAAGCTAGAGGT
ATAGATTAGCCGATATCACTTCATCCCATTAGATAAGCTGTGATTTGTTA
CGTTTTCTCGACTAACGACCAGTCCATCGTCAATCGGCCAAACTCCTGTA
AGACAGAAAGTTCACGGGGCTTACAAAAATTCGAACGCTTTCTGCGAATG
TCGATAGGGAGATGGCTTTGTGTGCATTTTTTAGagaagatgagaaggaa
gaaaaactGGCAAGAATAAAGTCTTCCTCGCGTAGCATTCAGTAATTATT
TCCCCGCGGAATGAATTATATCT back to topCoding sequence (CDS) from alignment at CM002461.1:551503..552325+ >rna3499 ID=rna3499|Name=rna3499|organism=Nannochloropsis gaditana|type=CDS|length=306bp|location=Sequence derived from alignment at CM002461.1:551503..552325+ (Nannochloropsis gaditana)
ATGACGATTACTTCTTCTATTGTGAAGTTTATAGCTTCTGTCCGGCTCGT
GATCAGCAATTTGTACGGAAGAATTACCTGCTACTCTCCAACTCTTGCTC
TGCATAATGGAATAACGACCTTGTTTACGTGCACTGCCCTCGAAATTTCT
ACTATACGGGGAAGCTACAAAATCGGATCAATGAAATTGAGCCTTTCTCG
CGCGCGCACACACACATGCATCGCACACACGCGCTACACGAACAACGCAC
ATTTATTTATTTATGTATATGTGGGATATGAAGGCAAGTACGACAACACT
TTGTAA back to top
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