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Properties
| Property Name | Value |
|---|
| Product | gdp-mannose-dependent alpha-mannosyltransferase |
| Orig transcript id | gnl|cribi|Naga_100010g28.6122.mrna |
| Orig protein id | gnl|cribi|Naga_100010g28.6122 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:501650..503646 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3475 ID=rna3475|Name=rna3475|organism=Nannochloropsis gaditana|type=mRNA|length=2442bp
ATGGGGATCTCAGGATTGTGGAATTTCCTCCGTGACCAAGGCCACGTTCG
CAATCTTGATGGTGTGGAGTTGGCGAGGCATGTTGAAAATAAGGTCCTGG
CTGTGGATGCCTCCCTTTGGTTGATGCAGTGTCGGAAGGAGAGCACATAT
CTCCACGACAAAAAGCACATCAAAGTGGTGTTCGAGCGCGTGATTCATTA
TTTGCGACTTGGTGCCCTGCCTGTCCTGGTCTTTGAGGGGTACACCCCCC
CGGCCAAGCAAACAAAAATGGAGCGCCGTCGTAAGACGATGTGGAAAGGC
ATGTCGTCTCCGAGCCAGCCTTACGTGCCGCGCTGTAACCACTCCCTTAT
GCAGCTGGGAGAGGACGTGAAAAAATTGTTAGATGCGATGGGATTGCCTT
ACGAGCAGGCAGGCGGCGAAGGGGAGGCTCTCTGTGCCGTGATGTATTGT
CAAGGCCTGGTGGACTCGGTAGTCTCGAGCGACGGCGATGCCCTGCTGTA
CGGGGCCCGCCGCCTGTACAAGGACCTGCGTCTGCACGCGAGGCTGCTTC
CGGACAATCACTCCGGAGAGTGGGTGGCCCTGGAGAATGATGATGGTGTG
TCGATCTCAGGGCAAGACCTGATGGCAGTGTGCCTCCTGGCTGGGTGCGA
CTTCCTCTCGGAAGGCCTCCGACAGGTCGGGTGCATAGGGGCATGGGGAG
TAGTGCGTGCCCTAAAGGCCCGACGGGCGCGAATCCTACAGCAGGGGGAG
GGTAGTGCCGCTAACATCGCGCTTGGAAGCAGAAGCTTGGTGGACTTGCT
GCGCTCCTGTCTATCGGAAGCGGTGGATGAGCCGATGACGGCGCCTGCAG
CAGGCGCATGCGTGACCTGTCGAAGTCATCCGCATGTAGAGGCAGGAAAG
AAAGTGCGCGGTACAAAGGGGTGCCAGAAGTGTGGGATGCTGCCCAAGGT
GAGGGGCGGCGTAGGAGAGGGAGGCTGCAATCGGGGACAGACGCAGGCCG
ATGCCGTGGGCGTTGGAGGCGTGTTTGTTGGGAATGACAGCCCCTGTCTG
TGTATGTCTTGCCAGCGGCGAGACGATGGGACACTCCAATTACTGGCCAA
GCGGGCAAGAGACGGCCAGGGAGGTCTGCAGGGCTATCTGCGGAAGTTTG
ACGAGGCACACGCCGCCTACAAAGCGGCCTCCGATGCGGCCATGGATTTG
ACCAGAAGTCTTCGAAGTGCCGGGGACGAGGCGACTGGCACGGACGGAAG
CGCACCGGGAAAGTGTCCAGCCCATTTTGAGTGGCGTAGGCGACCGGATG
TTGCGCTTCTCAAGGAGATGCTGGAGCCCGTCTACGGGAAGGGAGGGATG
GGAGGGAGGAACCTGGCGCGGAAGCTCCTGCCATTGCTCCTAGAGTGGGA
CGCACGGCACATCGGCGACGTACTGGGGCCGGGCCCTGACGCCCAGGAGG
TGGGTGCGAGAGAGCTAGCCCTTGCGACCCACCAAGGGTATCTGTTCGCG
CCCATCCGCATCGATCGGGTTTGCCAGATCGGTGGCGGCGGCTGGCGCTA
CGCGATGGATTGGGTAGCTCTTCGCCCGGAGGCGGAATCTCTGATTGCGG
AAGCGGCAGAGGGCATGCAGAGAGCAGCGGGCAGCCAATGGACCAGTCAA
GGGGGAGGGAAAATGTTGCCATCCCTGAAGGAGGTTCTGAGCGAGGGCCG
CGGCAGCCTCCGGCGCAGCCTAGTAGAAGCCAAGTATCCTTACCTTGTGA
GGGCGTTCGAGCAAAGGTGCCAGAGGGTACGACCGTCCCGGCCGCGGAAG
GAGCAAGGCCGTGACGCACTTGCCTCCGTGATCAGGCCGGAGGGCAGGTT
GGAGCACTTTTTCTCGCCCCTCAAAGCAGCGTTAATTCCACCTTCGTCCC
CATCACAGCCCCCCGGCGTTCAGTCCTCCGAGTCGCCATCAAAATCCTCA
CCGCGGGTCACTCCCACATTGTCTCATACTGACTTCCACGTAGAGTCTCC
GGTCTCTGCGCCTTCGCCCACTGTCCGACTCGGCACCAGGTCCTCCCATT
CGTGCTGTGTCCCGCGGGCTCCGCGCAAGGGCAAGCCCCCGGATCTTTTG
GACAAGGGAATTGAAAGGCAGGGCCTTGGAGGGAGGAGCGCGAGGAGAAA
TCTCGACCATTTTTTCAAGCGCGCGCGCTTCGACGACCACCCGGATCCCT
CGGACTCCTCCGTGCACGGCGCTCCCCGCCAAATCCATGTTGACATCAGG
TGCGTCGACGAGGAGGAGACGGATGGCGAAGACTTGCTGATAGACTTGAC
TGCAGACCCTTTACCGCACTTCTCTGAGGTCGCGGAATTTGCTACCACAG
AGGAGGACTGGGCGGTGCTTAATATCACTGGGACTGATGAGAACATCGTA
GACGTGTCCAAGGAGCGACGTATGCGGCGAATCGATTGCTAG back to topprotein sequence of rna3475 >rna3475-protein ID=rna3475-protein|Name=rna3475|organism=Nannochloropsis gaditana|type=polypeptide|length=505bp
MVANSGWRCRSKLGFAFSLTSTIVLISAVLLLCGQPCFGFGALLRHSPGV
FKSNTLLGTRRLSPMQSTLSDDEIAVVTQAESAVNAMFKRPLRVGLLVEP
TPFTHVSGYANRFKEMLKHLHRTGDRVEICTTDDVPSAPPKFLDYRINYT
PGFRFPLYDHISLSLDVKLVAYQLLKVFRPHIIHVSTPGFLCFAAAIYAR
ILRIPLLFSYHTHLPIYARDYMGFIPGIVSLTRFVIRVVHNWADLTLVTS
PQLKDELESFGVKRVAVWKKGIDTDRFHPRFRDADMRTRLTDGHPEAHLL
IYVGRLGAEKKLKTLRGVLKRIPGARLALVGGGPAEGDLREYFKGTNTVF
TGLLHGEELSKAFASADVFLMPSDSETLGFVVLESMASGVPVVGARAGGL
PNVIEHGKTGFLVPVGDEPAFAARVQQLLGDRGLMRDMMAAGREEAESLD
WASAMDHLRNIHYKRAVMIHRRRTLSAFLAWAGTFKERTVHNLKQSMEGM
FATAT back to topmRNA from alignment at CM002461.1:501650..503646- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3475 ID=rna3475|Name=rna3475|organism=Nannochloropsis gaditana|type=mRNA|length=1997bp|location=Sequence derived from alignment at CM002461.1:501650..503646- (Nannochloropsis gaditana)
ATGGTGGCGAACTCGGGCTGGAGATGTCGTAGTAAACTGGGATTCGCATT
TTCCTTGACGTCCACGATCGTTCTGATCTCCGCCGTGTTGCTTCTGTGCG
GGCAGCCATGTTTCGGCTTCGGCGCATTACTCAGGCACAGCCCTGGTGTC
TTCAAGAGCAACACTCTTCTCGGTACTCGAAGGTAAGTTAGTGTGCACGA
GGTGGGTCGGGGCCTTTCGCTGGTCTACGACATGACTCAAACAGAAGAGA
TTCTCAAGTTCTCAGATTTTTCATGTACGCCCTAATTTCGCACGACAGAC
TCTCGCCAATGCAAAGTACCCTCAGTGACGATGAGATAGCAGTAGTTACA
CAGGCAGAAAGCGCTGTAAATGCTATGTTCAAGAGGCCATTGCGCGTAGG
GCTGTTGGTGGAGCCGACAGTAAGTCCCATGCTCTCCCCGAATCTTCGGA
TTCCTTGTTCTCAACTGCTTTCCCCGCTGTGTTTTGTACATCGTCGCGAT
GGGAACCCCCTTTCTGTCACTACCACATTGTTTTGAGCGTGTCACACGTC
GTAGCCGTGCATCTCAACCCAATGACTGAGAGGCCCCAAATAACTGGACA
CGAGCCTGCGAAACTCCTCCCGCTTCCATTACTGGGACGGGCCAAAGCAT
GCGGCGACCCCTCAATTTAGTGTTTTACAAGCCAAACGTATCGCTGCAAT
ATGAAGTAATTTGCTTACATGTTTGATCTAAAACGAAATTCGGCTTTTCT
CTTTTCCCACCACCCTTCTTTCTTTCCTTCAGCCCTTCACGCACGTGAGC
GGATACGCCAATCGGTTCAAGGAAATGCTTAAACACTTACATAGAACGGG
AGACCGCGTAGAGATTTGCACCACCGATGATGTGCCATCTGCTCCTCCCA
AATTTCTAGACTACCGCATCAACTATACACCCGGCTTTCGCTTCCCCCTC
TACGACCACATCAGCCTCAGCTTGGACGTGAAGCTCGTAGCCTATCAATT
GCTAAAAGTCTTCCGGCCTCACATAATCCATGTATCCACCCCTGGCTTCC
TGTGCTTTGCAGCTGCCATATACGCCCGGATCTTGCGTATTCCCTTGCTC
TTTTCCTACCACACGCACCTCCCGATCTACGCTCGCGACTACATGGGCTT
CATCCCGGGCATTGTAAGTCTGACACGGTTCGTCATTCGCGTCGTACATA
ACTGGGCGGACCTGACGCTGGTCACCAGCCCGCAGCTGAAGGATGAGCTT
GAGAGTTTCGGGGTCAAGCGCGTGGCGGTATGGAAGAAAGGCATCGACAC
AGATCGTTTTCACCCCCGGTTCCGCGATGCCGACATGCGGACGAGATTGA
CAGACGGACACCCGGAAGCGCATCTTTTAATTTACGTAGGAAGGCTGGGG
GCAGAGAAGAAGCTTAAGACTCTGCGTGGAGTTCTGAAGCGGATCCCGGG
AGCAAGGCTTGCCTTGGTGGGGGGCGGGCCCGCGGAGGGGGACCTGCGGG
AGTATTTCAAAGGAACGAACACCGTTTTCACTGGATTGTTACACGGAGAA
GAGCTGAGCAAGGCATTCGCCTCCGCAGACGTCTTCCTTATGCCCTCGGA
CTCGGAGACACTCGGATTCGTCGTCCTGGAGTCCATGGCTAGCGGCGTCC
CCGTCGTGGGAGCCCGAGCTGGTGGACTTCCCAATGTGATAGAGCACGGA
AAGACGGGCTTCTTAGTGCCCGTGGGAGATGAACCGGCCTTTGCAGCACG
GGTGCAGCAATTGCTGGGGGATCGCGGTCTGATGCGGGATATGATGGCGG
CCGGCCGGGAGGAAGCGGAGAGCCTGGACTGGGCAAGCGCCATGGACCAC
CTGAGGAACATTCACTACAAGAGAGCTGTCATGATTCATCGCCGGCGCAC
TTTGAGCGCTTTCTTGGCCTGGGCTGGCACATTTAAAGAACGCACGGTGC
ATAATTTGAAGCAAAGCATGGAAGGTATGTTTGCAACTGCGACCTGA back to topCoding sequence (CDS) from alignment at CM002461.1:501650..503646- >rna3475 ID=rna3475|Name=rna3475|organism=Nannochloropsis gaditana|type=CDS|length=4554bp|location=Sequence derived from alignment at CM002461.1:501650..503646- (Nannochloropsis gaditana)
CCCTTCACGCACGTGAGCGGATACGCCAATCGGTTCAAGGAAATGCTTAA
ACACTTACATAGAACGGGAGACCGCGTAGAGATTTGCACCACCGATGATG
TGCCATCTGCTCCTCCCAAATTTCTAGACTACCGCATCAACTATACACCC
GGCTTTCGCTTCCCCCTCTACGACCACATCAGCCTCAGCTTGGACGTGAA
GCTCGTAGCCTATCAATTGCTAAAAGTCTTCCGGCCTCACATAATCCATG
TATCCACCCCTGGCTTCCTGTGCTTTGCAGCTGCCATATACGCCCGGATC
TTGCGTATTCCCTTGCTCTTTTCCTACCACACGCACCTCCCGATCTACGC
TCGCGACTACATGGGCTTCATCCCGGGCATTGTAAGTCTGACACGGTTCG
TCATTCGCGTCGTACATAACTGGGCGGACCTGACGCTGGTCACCAGCCCG
CAGCTGAAGGATGAGCTTGAGAGTTTCGGGGTCAAGCGCGTGGCGGTATG
GAAGAAAGGCATCGACACAGATCGTTTTCACCCCCGGTTCCGCGATGCCG
ACATGCGGACGAGATTGACAGACGGACACCCGGAAGCGCATCTTTTAATT
TACGTAGGAAGGCTGGGGGCAGAGAAGAAGCTTAAGACTCTGCGTGGAGT
TCTGAAGCGGATCCCGGGAGCAAGGCTTGCCTTGGTGGGGGGCGGGCCCG
CGGAGGGGGACCTGCGGGAGTATTTCAAAGGAACGAACACCGTTTTCACT
GGATTGTTACACGGAGAAGAGCTGAGCAAGGCATTCGCCTCCGCAGACGT
CTTCCTTATGCCCTCGGACTCGGAGACACTCGGATTCGTCGTCCTGGAGT
CCATGGCTAGCGGCGTCCCCGTCGTGGGAGCCCGAGCTGGTGGACTTCCC
AATGTGATAGAGCACGGAAAGACGGGCTTCTTAGTGCCCGTGGGAGATGA
ACCGGCCTTTGCAGCACGGGTGCAGCAATTGCTGGGGGATCGCGGTCTGA
TGCGGGATATGATGGCGGCCGGCCGGGAGGAAGCGGAGAGCCTGGACTGG
GCAAGCGCCATGGACCACCTGAGGAACATTCACTACAAGAGAGCTGTCAT
GATTCATCGCCGGCGCACTTTGAGCGCTTTCTTGGCCTGGGCTGGCACAT
TTAAAGAACGCACGGTGCATAATTTGAAGCAAAGCATGGAAGGTATGTTT
GCAACTGCGACCTGAACTCTCGCCAATGCAAAGTACCCTCAGTGACGATG
AGATAGCAGTAGTTACACAGGCAGAAAGCGCTGTAAATGCTATGTTCAAG
AGGCCATTGCGCGTAGGGCTGTTGGTGGAGCCGACAATGGTGGCGAACTC
GGGCTGGAGATGTCGTAGTAAACTGGGATTCGCATTTTCCTTGACGTCCA
CGATCGTTCTGATCTCCGCCGTGTTGCTTCTGTGCGGGCAGCCATGTTTC
GGCTTCGGCGCATTACTCAGGCACAGCCCTGGTGTCTTCAAGAGCAACAC
TCTTCTCGGTACTCGAAGCCCTTCACGCACGTGAGCGGATACGCCAATCG
GTTCAAGGAAATGCTTAAACACTTACATAGAACGGGAGACCGCGTAGAGA
TTTGCACCACCGATGATGTGCCATCTGCTCCTCCCAAATTTCTAGACTAC
CGCATCAACTATACACCCGGCTTTCGCTTCCCCCTCTACGACCACATCAG
CCTCAGCTTGGACGTGAAGCTCGTAGCCTATCAATTGCTAAAAGTCTTCC
GGCCTCACATAATCCATGTATCCACCCCTGGCTTCCTGTGCTTTGCAGCT
GCCATATACGCCCGGATCTTGCGTATTCCCTTGCTCTTTTCCTACCACAC
GCACCTCCCGATCTACGCTCGCGACTACATGGGCTTCATCCCGGGCATTG
TAAGTCTGACACGGTTCGTCATTCGCGTCGTACATAACTGGGCGGACCTG
ACGCTGGTCACCAGCCCGCAGCTGAAGGATGAGCTTGAGAGTTTCGGGGT
CAAGCGCGTGGCGGTATGGAAGAAAGGCATCGACACAGATCGTTTTCACC
CCCGGTTCCGCGATGCCGACATGCGGACGAGATTGACAGACGGACACCCG
GAAGCGCATCTTTTAATTTACGTAGGAAGGCTGGGGGCAGAGAAGAAGCT
TAAGACTCTGCGTGGAGTTCTGAAGCGGATCCCGGGAGCAAGGCTTGCCT
TGGTGGGGGGCGGGCCCGCGGAGGGGGACCTGCGGGAGTATTTCAAAGGA
ACGAACACCGTTTTCACTGGATTGTTACACGGAGAAGAGCTGAGCAAGGC
ATTCGCCTCCGCAGACGTCTTCCTTATGCCCTCGGACTCGGAGACACTCG
GATTCGTCGTCCTGGAGTCCATGGCTAGCGGCGTCCCCGTCGTGGGAGCC
CGAGCTGGTGGACTTCCCAATGTGATAGAGCACGGAAAGACGGGCTTCTT
AGTGCCCGTGGGAGATGAACCGGCCTTTGCAGCACGGGTGCAGCAATTGC
TGGGGGATCGCGGTCTGATGCGGGATATGATGGCGGCCGGCCGGGAGGAA
GCGGAGAGCCTGGACTGGGCAAGCGCCATGGACCACCTGAGGAACATTCA
CTACAAGAGAGCTGTCATGATTCATCGCCGGCGCACTTTGAGCGCTTTCT
TGGCCTGGGCTGGCACATTTAAAGAACGCACGGTGCATAATTTGAAGCAA
AGCATGGAAGGTATGTTTGCAACTGCGACCTGAACTCTCGCCAATGCAAA
GTACCCTCAGTGACGATGAGATAGCAGTAGTTACACAGGCAGAAAGCGCT
GTAAATGCTATGTTCAAGAGGCCATTGCGCGTAGGGCTGTTGGTGGAGCC
GACAATGGTGGCGAACTCGGGCTGGAGATGTCGTAGTAAACTGGGATTCG
CATTTTCCTTGACGTCCACGATCGTTCTGATCTCCGCCGTGTTGCTTCTG
TGCGGGCAGCCATGTTTCGGCTTCGGCGCATTACTCAGGCACAGCCCTGG
TGTCTTCAAGAGCAACACTCTTCTCGGTACTCGAAGCCCTTCACGCACGT
GAGCGGATACGCCAATCGGTTCAAGGAAATGCTTAAACACTTACATAGAA
CGGGAGACCGCGTAGAGATTTGCACCACCGATGATGTGCCATCTGCTCCT
CCCAAATTTCTAGACTACCGCATCAACTATACACCCGGCTTTCGCTTCCC
CCTCTACGACCACATCAGCCTCAGCTTGGACGTGAAGCTCGTAGCCTATC
AATTGCTAAAAGTCTTCCGGCCTCACATAATCCATGTATCCACCCCTGGC
TTCCTGTGCTTTGCAGCTGCCATATACGCCCGGATCTTGCGTATTCCCTT
GCTCTTTTCCTACCACACGCACCTCCCGATCTACGCTCGCGACTACATGG
GCTTCATCCCGGGCATTGTAAGTCTGACACGGTTCGTCATTCGCGTCGTA
CATAACTGGGCGGACCTGACGCTGGTCACCAGCCCGCAGCTGAAGGATGA
GCTTGAGAGTTTCGGGGTCAAGCGCGTGGCGGTATGGAAGAAAGGCATCG
ACACAGATCGTTTTCACCCCCGGTTCCGCGATGCCGACATGCGGACGAGA
TTGACAGACGGACACCCGGAAGCGCATCTTTTAATTTACGTAGGAAGGCT
GGGGGCAGAGAAGAAGCTTAAGACTCTGCGTGGAGTTCTGAAGCGGATCC
CGGGAGCAAGGCTTGCCTTGGTGGGGGGCGGGCCCGCGGAGGGGGACCTG
CGGGAGTATTTCAAAGGAACGAACACCGTTTTCACTGGATTGTTACACGG
AGAAGAGCTGAGCAAGGCATTCGCCTCCGCAGACGTCTTCCTTATGCCCT
CGGACTCGGAGACACTCGGATTCGTCGTCCTGGAGTCCATGGCTAGCGGC
GTCCCCGTCGTGGGAGCCCGAGCTGGTGGACTTCCCAATGTGATAGAGCA
CGGAAAGACGGGCTTCTTAGTGCCCGTGGGAGATGAACCGGCCTTTGCAG
CACGGGTGCAGCAATTGCTGGGGGATCGCGGTCTGATGCGGGATATGATG
GCGGCCGGCCGGGAGGAAGCGGAGAGCCTGGACTGGGCAAGCGCCATGGA
CCACCTGAGGAACATTCACTACAAGAGAGCTGTCATGATTCATCGCCGGC
GCACTTTGAGCGCTTTCTTGGCCTGGGCTGGCACATTTAAAGAACGCACG
GTGCATAATTTGAAGCAAAGCATGGAAGGTATGTTTGCAACTGCGACCTG
AACTCTCGCCAATGCAAAGTACCCTCAGTGACGATGAGATAGCAGTAGTT
ACACAGGCAGAAAGCGCTGTAAATGCTATGTTCAAGAGGCCATTGCGCGT
AGGGCTGTTGGTGGAGCCGACAATGGTGGCGAACTCGGGCTGGAGATGTC
GTAGTAAACTGGGATTCGCATTTTCCTTGACGTCCACGATCGTTCTGATC
TCCGCCGTGTTGCTTCTGTGCGGGCAGCCATGTTTCGGCTTCGGCGCATT
ACTCAGGCACAGCCCTGGTGTCTTCAAGAGCAACACTCTTCTCGGTACTC
GAAG back to top
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