rna3438, rna3438 (mRNA) Nannochloropsis gaditana

Overview
Namerna3438
Unique Namerna3438
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1639
Alignment locationCM002461.1:421682..422489 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100038g36.7723.mrna
Orig protein idgnl|cribi|Naga_100038g36.7723
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:421682..422489 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100038g36gene3312Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3438rna3438-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27268.1cds3429Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3438 ID=rna3438|Name=rna3438|organism=Nannochloropsis gaditana|type=mRNA|length=1639bp
AGTGCTAATAGGATCTCCTCTCCCCGAACCCGCGCCAGGCACAGGCGAGG
ACTGTTGGATAGTATGGTCTTCTGCTGCTGTTTACCGCCGTCCTTTGAGC
CCCCTTGCCCCCCCCCTCCGGCTTATTCGGCCACTCAGTCGGCGCAAGCG
GAGGGCCCGCCCGTCCCTCCCACGGACACGGCCGGGAGGGCAGTGGAGCA
CAGTTTCTCAGTCCTCAGCGAGGAGGAGTTGGGGGCTGCAGTCGCAGGGG
GGGAAGGAAACGGCAATGGCCACCACCATGATTCTACCTCCGCCAGACCC
CATGCGGATGCCGATGGTTTGGTGCACGTGGATGGTGAAAATGTCTGTGA
GACGGACGAGGAGGAGGACGGGGAGGAGCACGATTGGGACTGCCACATGA
CGGACCTGGCGGCTCTTACTTATCCACCGGGGCAAGCAGAGGCGGACCCG
ATCAAGGTGAACGAATACGCCGTCGACGGCTTCTTGGGCGCAGGCGCCTT
TGGGAATGTGAAACGTGCCCGAAGGGAAGTAGGTCCGCCCCCCTACCAGA
CCTATGCCATCAAGATCATGAGCCGTCATCGACTCCGGCGCTTCAAATCC
AGCGTGATGTCGGTGGGGGGAAGCCACATGGAGGTGAAGACCGGGATAGA
CATGATGCGCAACGAGATCCGAATCATGCGGCATCTGTACCACCGGAATG
TGGTGTTACTGTTCGAGGTCATCAACGACCCCTCGGAGGACAGCATCTTC
ATGATCATGGAGTACCTGGAGGGCGGGATCTCCATGGACTACGACAAGAA
GACCAAGCGCTTCCGGAGCCCCCTCACGGGCGGTGTCCTCCCACCCCCCA
CCGCCTGCAAGCTCTTCTTCGGCCTTGTCGCCGGCCTCCAGTATCTGCAC
GGCAAAGGCATCTGCCACCGCGACATTAAGCCCGAAAATCTGCTCCTCAC
AGACGGGACCAAGCTGCGGATAACGGATTTCGGATGTGCCCAGCGGATCA
AGGACACAGGAGAGGGAGGGGAGGGGGGGGGCCGGGGACCGGGGGAAGCT
CTTCGACACCTCCGGCACCTACAATTTCCTCGCGCCCGAGTGCTGCTCGG
GCGAGGGCTTCTTCCCCTGGCCGGTGGACGTGTGGGCGGCGGGTCTTTGC
CTGTACTGCTTCCTCTTCGGGCGCCTGCCCTTCCAGAAGGCTGGGCTCGC
CCCCCTCTTCGCGGCCATCCAGGAAGAGGAAGTTCAGATCCCCCCCGTGG
AGGAAGACGGCGAGGGAGGGGCCGCGGGAGGGGAGAATGGAGAGGGGGAG
GCCAGGGGCGGCCAAAGCGTTGAGCCCGAGCTGCATGAGATGCTGGAGGG
TTTGTTCTTGAAAGACCCGGGAGCCAGGTGGACGTTGGAGCGGCTGCGAG
CGCATTCGTGTCTGGCACAGGCGCGGAGGGAGGACGAGGAGGAGGACCGG
AGGCGGGACGAGGAGGAGGAGCGGGAGAGGAGGGAGAGGGAGGAAAGGGA
GCGTGAAAGGCGGAATGGAATCGATGAAGGGGGGGGGGGAGGCGAGCAGG
AGCTGACTCAGGCGACCAGCTAGTCAGCGAGGGAGGAGTGAGGCGGGAAG
CAGGCGTGTAAGAAAGTCAAGAGAGACCGCGAGAAGCCC
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protein sequence of rna3438

>rna3438-protein ID=rna3438-protein|Name=rna3438|organism=Nannochloropsis gaditana|type=polypeptide|length=101bp
MVKLNRMVLTQGFGFILLPVLAVALTKIYGASPEETEKQLERMAVEEQHR
SRSAGKGGDSDVQVMHDFIRKQAVNQQADYSAILQSGRGKVKRQRDIEPS
A
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mRNA from alignment at CM002461.1:421682..422489-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3438 ID=rna3438|Name=rna3438|organism=Nannochloropsis gaditana|type=mRNA|length=808bp|location=Sequence derived from alignment at CM002461.1:421682..422489- (Nannochloropsis gaditana)
CTCACAGCCTCCTGCCCCCACTGAGGCCACAATGGTGAAGCTGAATCGCA
TGGTGTTAACTCAAGGATTTGGCTTCATTCTTCTGCCAGTACTTGCGGTT
GCTCTGACAAAAATATATGGCGCGAGCCCTGAGGAGACAGAGAAACAGCT
CGTAAGTGCAGAGATGGCAGGCAAGCGGAGGTGTGTGACGCGCTTATCCA
CACCACGATGGAAGACGATAGCTGCGATAGTTTTACTTTAGCTGGCTGCC
TGCCATGGAAGTGTCTCTGTGTAGCCGCCAGCTCAATCGCGGCTCGACAT
CACGTAGGCTTCTCTGACCAAACAACGATGCATGGCTGATGCCTGCGCGC
TTCCCCACCCCGCAGGAGCGGATGGCCGTGGAGGAGCAACACAGGAGCCG
GAGCGCGGGGAAAGGCGGGGATTCAGACGTGCAGGTCATGCATGATTTCA
TTCGGAAGCAGGCTGTCAACCAACAAGCCGACTATAGCGTGAGTAAGGGC
AGGAGGGGGAGACACCGCTTTTGCCTCGTCCTAGGCGAGGCGGAGATCTT
CGTGACCGAGTCATTTTTCCAGTCGCTTCCTCTGCCGATGAGCCTCTGAG
TCCCTCTGCTTTCTTACCGTATTTCTGTGTCAATCGCCCGCTTTCCGCAC
CCATCCCAGGCCATCTTGCAATCGGGGCGGGGGAAAGTGAAGAGACAGAG
GGACATCGAGCCCTCGGCGTGAGGAGGGCGCCGACCAAGTGGCGGGGAAC
GAGGACGGGAGGTAGTGAGACGGGCGCTAATTTTAAAAAAAAGATTGTAC
ATGGTGTC
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Coding sequence (CDS) from alignment at CM002461.1:421682..422489-

>rna3438 ID=rna3438|Name=rna3438|organism=Nannochloropsis gaditana|type=CDS|length=918bp|location=Sequence derived from alignment at CM002461.1:421682..422489- (Nannochloropsis gaditana)
GCCATCTTGCAATCGGGGCGGGGGAAAGTGAAGAGACAGAGGGACATCGA
GCCCTCGGCGTGAGAGCGGATGGCCGTGGAGGAGCAACACAGGAGCCGGA
GCGCGGGGAAAGGCGGGGATTCAGACGTGCAGGTCATGCATGATTTCATT
CGGAAGCAGGCTGTCAACCAACAAGCCGACTATAGCATGGTGAAGCTGAA
TCGCATGGTGTTAACTCAAGGATTTGGCTTCATTCTTCTGCCAGTACTTG
CGGTTGCTCTGACAAAAATATATGGCGCGAGCCCTGAGGAGACAGAGAAA
CAGCTCGCCATCTTGCAATCGGGGCGGGGGAAAGTGAAGAGACAGAGGGA
CATCGAGCCCTCGGCGTGAGAGCGGATGGCCGTGGAGGAGCAACACAGGA
GCCGGAGCGCGGGGAAAGGCGGGGATTCAGACGTGCAGGTCATGCATGAT
TTCATTCGGAAGCAGGCTGTCAACCAACAAGCCGACTATAGCATGGTGAA
GCTGAATCGCATGGTGTTAACTCAAGGATTTGGCTTCATTCTTCTGCCAG
TACTTGCGGTTGCTCTGACAAAAATATATGGCGCGAGCCCTGAGGAGACA
GAGAAACAGCTCGCCATCTTGCAATCGGGGCGGGGGAAAGTGAAGAGACA
GAGGGACATCGAGCCCTCGGCGTGAGAGCGGATGGCCGTGGAGGAGCAAC
ACAGGAGCCGGAGCGCGGGGAAAGGCGGGGATTCAGACGTGCAGGTCATG
CATGATTTCATTCGGAAGCAGGCTGTCAACCAACAAGCCGACTATAGCAT
GGTGAAGCTGAATCGCATGGTGTTAACTCAAGGATTTGGCTTCATTCTTC
TGCCAGTACTTGCGGTTGCTCTGACAAAAATATATGGCGCGAGCCCTGAG
GAGACAGAGAAACAGCTC
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Synonyms
Publications