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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100038g25.7717.mrna |
| Orig protein id | gnl|cribi|Naga_100038g25.7717 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:393401..394450 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3428 ID=rna3428|Name=rna3428|organism=Nannochloropsis gaditana|type=mRNA|length=1734bp
ATGACTGCTGTACAGTCAGCTTACCTAGTCCGACGTTTCATTGTGACCGG
ACAATGGTTACCTAGTGTACGTAGCCGAGTGTTCTTCTCCTCCTCAGCGT
CCTCCTCGTCCTCCTGGTCTGACAAAGAACGGAGCAACCGATCCGTGCCA
TCACTGGGCGTACCTGACACAGACGATCCTTTCCTTATTCTGGGGGTGAG
TATAGACGCCAGTGAATCAGAAATCAAAAACAATTTCTACCAATTGGCCA
AACGGGTGCATCCTGACGCCGTTTTACGACAATCACGCGACGGAGTGAAA
AATGGCAGAAGAGAGGCATCGAATGCTGCGGCCGACTTTCAGAAGCTGGT
GCGCGCCTACGAAATCCTCTCAGACCCAACAAGGCGGGCGGAGTACATAC
TCAAGAACCCGCACCGGCCACGTGGGTGTGGCTCTGGAGGAGTGGGAGCG
GCACCACCCTCTTGGGGCGGCAAAGGTCCGAGCCCTGTAGATGTTTTCAA
CGCCTCGCTGCGCCAGGGCCGCCGTCGGAGGGCCGGTCTGGGTGATGATC
GCTTTGCGAAATGGACGCGGAGCAAGGAAAACACAGGTAGCGAGGACGAG
GAGTTGAAGGGAACACAAGGCGCGGGGCCGGGGGGAGGAGGCAAGGCTGC
GAGGTCATGGGACGCTGTCTCGCTCCTGAATCCCGGACTCTTGGGCCGCC
TTCAGGAGTCCTTCCAAGAGGCGATGATCCACGCTTACCTGGGCCCGTAC
GTAGCAGACAATACCATTCCTTGGGCCTTCGAGGCCGAGGAGCGCCGGGC
TCGAGGAAGCCGGGGGCGAGACGAGACAAGGCGGGGGAGGGCAGGACACC
AGGCGCTGCATCCGCACATTCTGGAGATGACGTCGGGCCAGCAGCTGCTA
GGGTATGTAGAATCCGCGCCCGTCTCTTTCGAGGCCTTCCTGGAGGGTAT
GGCTGTCCAGGAGAAGCGCCTGGTGTCAAGGCCGGGGGCCGACATGGCAA
GCAAGGGGGAGGGAGAGGGGGAGGGGGGGGCAGACGGCCTCTGCCTTCGA
TCGCAGCTGAGTGGGATGGTGTCATTGCCTGACAAGGAAAACTTTGCGTC
GCTGCGTGTGATGTGGCAAGGGCAATGTCTGGGACGAGGAATGAGGTTTT
GGGACTCCGACAAGAAGGAGGACGTAGTGCTGATCGAGGCTTTCGCTTTG
CGGGACAACGAGGCCCCGCGTCCCGGCTGGTTCGGGCCACAGGCGCCTGA
GCAGACAGGCAACGAAGACATGATGGGTGTGGGCAGCTACGTGGTCAGGG
GCCTGGGGGCTCGACGCTTGCTCTCCAGCCATCCCGTGCGCCATGCAGCC
TCTGGTGCCGTGAGCCACGTCCTCGTCTCCCATCGGACCCCGCTCGTCTC
TCACTTCCACCTCCTGCAGGCGGAGGGTGGCGTGGAATGTCGCGTCAGCA
AGGGGGATTTGAAGGCGTACATTCCTTCCGAGTACTGGCGCTTCCCTCCC
CGCAGTCCCGACCATGACGTCGGGAGCTGGTACATCGAGCGAACGGGCTT
AGCTTCTCCAGAGACGGAAAGGACTTTGCGGGCGAAGCTGCGGGGCAAAA
TGCTGCCACCTGTGGTCATGATGTTGGTGTGTGCCTTCAAAACGCTTGAT
AAGGAGGAGCAGGAGGTCGGAAAAGGAGGAGGGCCGTCGCGGTTACAGGA
GACACTGAGAGGCTGGGTGCAAAGGATCATGTGA back to topprotein sequence of rna3428 >rna3428-protein ID=rna3428-protein|Name=rna3428|organism=Nannochloropsis gaditana|type=polypeptide|length=349bp
MQDLDSPAAENAFTQALQQPNVVKDQFDLLYASIFGRKDDSGNQITEDDI
DGAIVLSSQNHQGKVSSKYLEDNRWMIDRHDEEEEVTRLKTPVAPVSKKR
RRASFVDFEKVEACRALISPRPPNYDEEKLRSVWKPLAPAEDDFLDVSLS
ISRQRGPNTGYKVAEEKAMKSKQAVRCRKGEGGEESDVSCGGEWLQSRTA
LVSERNSIVPKHVNTSTSSDTAHVTPTMPCKARGAAPLTAGGTRRLSSGS
GSSTGSHQSRSMGSFFSPRPRFLGLSPEGAAYGTEGRGGSVMEKKSLGRE
DSGGKSASAVSKRCLPGCTPAASYTQEKPMPPSALFSVLKKSIFSHKAF back to topmRNA from alignment at CM002461.1:393401..394450- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3428 ID=rna3428|Name=rna3428|organism=Nannochloropsis gaditana|type=mRNA|length=1050bp|location=Sequence derived from alignment at CM002461.1:393401..394450- (Nannochloropsis gaditana)
ATGCAAGATCTTGACTCCCCAGCAGCGGAAAATGCATTCACCCAGGCTTT
ACAGCAACCAAACGTCGTCAAAGACCAATTCGACCTGTTGTACGCCTCCA
TTTTTGGAAGAAAGGACGACAGTGGCAATCAAATTACTGAAGACGACATT
GATGGCGCTATTGTCTTATCCTCTCAAAATCATCAGGGAAAAGTCTCTTC
AAAGTACTTGGAGGACAACAGATGGATGATTGACCGGCATGACGAAGAGG
AGGAAGTGACACGGCTGAAAACGCCTGTGGCTCCCGTTTCCAAGAAGCGA
CGAAGAGCTTCCTTCGTTGACTTTGAAAAAGTTGAAGCATGTCGGGCGCT
TATATCCCCGCGTCCACCCAATTACGACGAAGAGAAATTGAGGAGTGTGT
GGAAACCGTTAGCACCAGCGGAGGACGATTTCTTGGACGTATCCCTTTCA
ATTTCCCGACAACGTGGTCCAAATACTGGATACAAGGTAGCTGAAGAAAA
GGCGATGAAATCAAAACAGGCTGTGCGCTGTCGGAAAGGAGAAGGAGGAG
AGGAAAGCGACGTTTCGTGCGGGGGCGAATGGCTCCAGTCCCGCACTGCT
CTGGTTTCCGAGCGCAACTCAATTGTACCCAAGCATGTAAACACCAGCAC
CAGCAGCGATACGGCACATGTAACACCTACCATGCCATGCAAGGCCCGTG
GAGCCGCCCCATTGACGGCCGGCGGCACAAGGAGGTTGTCCTCGGGCTCA
GGCAGCAGCACAGGAAGTCACCAGTCGAGATCGATGGGATCTTTCTTCTC
TCCTCGCCCTCGCTTTTTAGGCTTATCGCCTGAGGGCGCTGCTTATGGCA
CGGAAGGGAGGGGGGGCTCAGTGATGGAGAAGAAGAGCTTGGGTCGGGAG
GATTCAGGTGGAAAGAGCGCCTCCGCGGTGTCAAAGCGTTGCCTTCCGGG
ATGTACCCCTGCCGCGAGCTATACTCAAGAGAAACCCATGCCTCCTTCGG
CGCTTTTCAGTGTGCTGAAAAAGAGCATTTTCTCGCATAAAGCCTTTTGA
back to topCoding sequence (CDS) from alignment at CM002461.1:393401..394450- >rna3428 ID=rna3428|Name=rna3428|organism=Nannochloropsis gaditana|type=CDS|length=1050bp|location=Sequence derived from alignment at CM002461.1:393401..394450- (Nannochloropsis gaditana)
ATGCAAGATCTTGACTCCCCAGCAGCGGAAAATGCATTCACCCAGGCTTT
ACAGCAACCAAACGTCGTCAAAGACCAATTCGACCTGTTGTACGCCTCCA
TTTTTGGAAGAAAGGACGACAGTGGCAATCAAATTACTGAAGACGACATT
GATGGCGCTATTGTCTTATCCTCTCAAAATCATCAGGGAAAAGTCTCTTC
AAAGTACTTGGAGGACAACAGATGGATGATTGACCGGCATGACGAAGAGG
AGGAAGTGACACGGCTGAAAACGCCTGTGGCTCCCGTTTCCAAGAAGCGA
CGAAGAGCTTCCTTCGTTGACTTTGAAAAAGTTGAAGCATGTCGGGCGCT
TATATCCCCGCGTCCACCCAATTACGACGAAGAGAAATTGAGGAGTGTGT
GGAAACCGTTAGCACCAGCGGAGGACGATTTCTTGGACGTATCCCTTTCA
ATTTCCCGACAACGTGGTCCAAATACTGGATACAAGGTAGCTGAAGAAAA
GGCGATGAAATCAAAACAGGCTGTGCGCTGTCGGAAAGGAGAAGGAGGAG
AGGAAAGCGACGTTTCGTGCGGGGGCGAATGGCTCCAGTCCCGCACTGCT
CTGGTTTCCGAGCGCAACTCAATTGTACCCAAGCATGTAAACACCAGCAC
CAGCAGCGATACGGCACATGTAACACCTACCATGCCATGCAAGGCCCGTG
GAGCCGCCCCATTGACGGCCGGCGGCACAAGGAGGTTGTCCTCGGGCTCA
GGCAGCAGCACAGGAAGTCACCAGTCGAGATCGATGGGATCTTTCTTCTC
TCCTCGCCCTCGCTTTTTAGGCTTATCGCCTGAGGGCGCTGCTTATGGCA
CGGAAGGGAGGGGGGGCTCAGTGATGGAGAAGAAGAGCTTGGGTCGGGAG
GATTCAGGTGGAAAGAGCGCCTCCGCGGTGTCAAAGCGTTGCCTTCCGGG
ATGTACCCCTGCCGCGAGCTATACTCAAGAGAAACCCATGCCTCCTTCGG
CGCTTTTCAGTGTGCTGAAAAAGAGCATTTTCTCGCATAAAGCCTTTTGA back to top
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