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Properties
| Property Name | Value |
|---|
| Product | Heat shock protein DnaJ |
| Orig transcript id | gnl|cribi|Naga_100038g24.7709.mrna |
| Orig protein id | gnl|cribi|Naga_100038g24.7709 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:391373..393247 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3427 ID=rna3427|Name=rna3427|organism=Nannochloropsis gaditana|type=mRNA|length=1527bp
GTCGTCACTGTTTTACATAATATTCGATGACCAGATATATATGAGGCGCA
GAAGGCGTGAAAAAGAGTGTGCAGGCATTTCGGCAGACTGCCTGACAGGG
GATGATAGAAGGCGAAGACAATCGACAGGTCCTGTGCAATGACCGCTTCA
TGCTTCCCGCACAACACGGTTGAATGACTTCATACGTCAGCGTGAGCATT
CCAAACATCACGGCTTGAGTGGCCAACCAGCAATCTATTGATCGGATTTC
TGAAGCTTTAACAAAGTACCATGAAAGCGAACCTCCTGGTACCACATTCT
AACCTGTCGTCTACTTTGACACCCACAGCTGTGTCGATCCTAGTGAAATG
GGGAAGGATGGCTATATCCGTAAAGCCAGCCACAGTGGTAGCTGGTACAC
CAAGTCAGGCGAAGTGCTGAGAAAGCAATTGAGTGAATGGTTGCTTGAGG
CCTCTTCAGCTTCCTCATCCACCCCGAGCCAGCGCTGTGTCAAGGCCCTG
ATAGCTCCGCACGCCGGCTACAGCTACTCCGGCCCGACTGCAGCTCATGC
GTACATGCACCTGGACCCCTCCGTGATCCAACGGGTATTCATTTTGGGTC
CCTCCCATCACGTGTACCTCCGAGCCTGCGCTGTGTCCGGCGCCTCAGTG
TGCGAGACCCCGGTCGGCCCCCTGAGCGTGGACGAGGCCGTCCGCGCCGA
GCTCTTAGCCGACCCCCTCTTCCAGACCATGGCACAACGGGTGGACGAGG
ATGAGCACTCTATCGAGATGCACCTACCCTACGTGGCACACCTGGTCGGA
GAGGTGCAGGGCGTCTCTATCGTTCCCATACTGGTGGGATCCTTAGATCC
CACGCAGGAGGCTGTGTACGGGAGGATTCTCGCCAAGTACCTCTCCGACC
CCGCGAACCTCTTCATTGTCAGCACCGACTTTTGCCACTGGGGCCGCCGC
TTTCAATACCAGCCCTTCGACCGCGCGTACGGCGAGGACATCCACGAGTA
CATCGAGTGGCTGGACAGACAGGGCATGGCACTCATCGAACAAGGCGATC
CCCAGGCCTTCACCACCTACCTTCGACAGTACAGGAACACGATTTGCGGC
CGCCATCCGCTTGGCGTGTTTCTACAGGCGGCGCAGGCCTTGAGGGAGGG
AGGAAAGGAGGGTCTGGACGTGCGAGTAGAATTTGTCAGGTATGCTCAGA
GCAGCCGGTGTATGCATGAGACAGACTCCTCTGTGAGCTATGCGAGCGCG
GTGGCCACAACATTGATGGCGGGCAACGATGCCAGGGGAAACGGTGGCGC
CAAGCCTTTTATGACGTAGGCGCAGACTAAGTAGGATGGAACGGAAGTGA
GGGAGAGACAAGGTCTGAAATTGCTTTCCTGTGCATGTATATAGAAGTAT
CAAGATCAATGAGGCAGAATGTGAATATAGCTGCGATAAATAGAGATGAT
TATATAGCAATCTCGTGGTGACGTAAAGATAAAATAAAAAGGGATAGGCA
CTGACTGGCCTTTGTCCCATTCACATC back to topprotein sequence of rna3427 >rna3427-protein ID=rna3427-protein|Name=rna3427|organism=Nannochloropsis gaditana|type=polypeptide|length=577bp
MTAVQSAYLVRRFIVTGQWLPSVRSRVFFSSSASSSSSWSDKERSNRSVP
SLGVPDTDDPFLILGVSIDASESEIKNNFYQLAKRVHPDAVLRQSRDGVK
NGRREASNAAADFQKLVRAYEILSDPTRRAEYILKNPHRPRGCGSGGVGA
APPSWGGKGPSPVDVFNASLRQGRRRRAGLGDDRFAKWTRSKENTGSEDE
ELKGTQGAGPGGGGKAARSWDAVSLLNPGLLGRLQESFQEAMIHAYLGPY
VADNTIPWAFEAEERRARGSRGRDETRRGRAGHQALHPHILEMTSGQQLL
GYVESAPVSFEAFLEGMAVQEKRLVSRPGADMASKGEGEGEGGADGLCLR
SQLSGMVSLPDKENFASLRVMWQGQCLGRGMRFWDSDKKEDVVLIEAFAL
RDNEAPRPGWFGPQAPEQTGNEDMMGVGSYVVRGLGARRLLSSHPVRHAA
SGAVSHVLVSHRTPLVSHFHLLQAEGGVECRVSKGDLKAYIPSEYWRFPP
RSPDHDVGSWYIERTGLASPETERTLRAKLRGKMLPPVVMMLVCAFKTLD
KEEQEVGKGGGPSRLQETLRGWVQRIM back to topmRNA from alignment at CM002461.1:391373..393247+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3427 ID=rna3427|Name=rna3427|organism=Nannochloropsis gaditana|type=mRNA|length=1875bp|location=Sequence derived from alignment at CM002461.1:391373..393247+ (Nannochloropsis gaditana)
ATGACTGCTGTACAGTCAGCTTACCTAGTCCGACGTTTCATTGTGACCGG
ACAATGGTTACCTAGTGTACGTAGCCGAGtgttcttctcctcctcagcgt
cctcctcgtcctcctggtcTGACAAAGAACGGAGCAACCGATCCGTGCCA
TCACTGGGCGTACCTGACACAGACGATCCTTTCCTTATTCTGGGGGTGAG
TATAGACGCCAGTGAATCAGAAATCAAAAACAATTTCTACCAATTGGCCA
AACGGGTGCATCCTGACGCCGTTTTACGACAATCACGCGACGGAGTGAAA
AATGGCAGAAGAGAGGCATCGAATGCTGCGGCCGACTTTCAGAAGCTGGT
GCGTGCAGTGCTGCATAAGAAAGCCACGGTTTTGCTGTATGTATTCAGCA
TTTTATGATTTCCTCGAAAAATGATGAGACAAAGTGTGTCGGGCGCTCCG
CCGGCTCACATGTTGATTTCACCTCTCACGTCCGCACAGGTGCGCGCCTA
CGAAATCCTCTCAGACCCAACAAGGCGGGCGGAGTACATACTCAAGAACC
CGCACCGGCCACGTGGGTGTGGCTctggaggagtgggagcggCACCACCC
TCTTGGGGCGGCAAAGGTCCGAGCCCTGTAGATGTTTTCAACGCCTCGCT
GCGCCAGGGCCGCCGTCGGAGGGCCGGTCTGGGTGATGATCGCTTTGCGA
AATGGACGCGGAGCAAGGAAAACACAGGtagcgaggacgaggagttGAAG
GGAACACAAGgcgcggggccggggggaggaggcaaggctgCGAGGTCATG
GGACGCTGTCTCGCTCCTGAATCCCGGACTCTTGGGCCGCCTTCAGGAGT
CCTTCCAAGAGGCGATGATCCACGCTTACCTGGGCCCGTACGTAGCAGAC
AATACCATTCCTTGGGCCTTCGAGGCCGAGGAGCGCCGGGCTCGAGGAAG
CCGGGGGCGAGACGagacaaggcgggggagggcaggacaCCAGGCGCTGC
ATCCGCACATTCTGGAGATGACGTCGGGCCAGCAGCTGCTAGGGTATGTA
GAATCCGCGCCCGTCTCTTTCGAGGCCTTCCTGGAGGGTATGGCTGTCCA
GGAGAAGCGCCTGGTGTCAAGGCCGGGGGCCGACATGGCaagcaaggggg
agggagagggggaggggggggcagacggCCTCTGCCTTCGATCGCAGCTG
AGTGGGATGGTGTCATTGCCTGACAAGGAAAACTTTGCGTCGCTGCGTGT
GATGTGGCAAGGGCAATGTCTGGGACGAGGAATGAGGTTTTGGGACtccg
acaagaaggaggacgtagTGCTGATCGAGGCTTTCGCTTTGCGGGACAAC
GAGGCCCCGCGTCCCGGCTGGTTCGGGCCACAGGCGCCTGAGCAGACAGG
CAACGAAGACATGATGGGTGTGGGCAGCTACGTGGTCAGGGGCCTGGGGG
CTCGACGCTTGCTCTCCAGCCATCCCGTGCGCCATGCAGCCTCTGGTGCC
GTgagccacgtcctcgtctcccatcGGACCCCGCTCGTCTCtcacttcca
cctcctgcaggcggagggtggcGTGGAATGTCGCGTCAGCAAGGGGGATT
TGAAGGCGTACATTCCTTCCGAGTACtggcgcttccctccccgcagtCCC
GACCATGACGTCGGGAGCTGGTACATCGAGCGAACGGGCTTAGCTTCTCC
AGAGACGGAAAGGACTTTGCGGGCGAAGCTGCGGGGCAAAATGCTGCCAC
CTGTGGTCATGATGTTGGTGTGTGCCTTCAAAACGCTTGataaggaggag
caggaggtcggaaaaggaggagggccgtcGCGGTTACAGGAGACACTGAG
AGGCTGGGTGCAAAGGATCATGTGA back to topCoding sequence (CDS) from alignment at CM002461.1:391373..393247+ >rna3427 ID=rna3427|Name=rna3427|organism=Nannochloropsis gaditana|type=CDS|length=3468bp|location=Sequence derived from alignment at CM002461.1:391373..393247+ (Nannochloropsis gaditana)
ATGACTGCTGTACAGTCAGCTTACCTAGTCCGACGTTTCATTGTGACCGG
ACAATGGTTACCTAGTGTACGTAGCCGAGtgttcttctcctcctcagcgt
cctcctcgtcctcctggtcTGACAAAGAACGGAGCAACCGATCCGTGCCA
TCACTGGGCGTACCTGACACAGACGATCCTTTCCTTATTCTGGGGGTGAG
TATAGACGCCAGTGAATCAGAAATCAAAAACAATTTCTACCAATTGGCCA
AACGGGTGCATCCTGACGCCGTTTTACGACAATCACGCGACGGAGTGAAA
AATGGCAGAAGAGAGGCATCGAATGCTGCGGCCGACTTTCAGAAGCTGGT
GCGCGCCTACGAAATCCTCTCAGACCCAACAAGGCGGGCGGAGTACATAC
TCAAGAACCCGCACCGGCCACGTGGGTGTGGCTctggaggagtgggagcg
gCACCACCCTCTTGGGGCGGCAAAGGTCCGAGCCCTGTAGATGTTTTCAA
CGCCTCGCTGCGCCAGGGCCGCCGTCGGAGGGCCGGTCTGGGTGATGATC
GCTTTGCGAAATGGACGCGGAGCAAGGAAAACACAGGtagcgaggacgag
gagttGAAGGGAACACAAGgcgcggggccggggggaggaggcaaggctgC
GAGGTCATGGGACGCTGTCTCGCTCCTGAATCCCGGACTCTTGGGCCGCC
TTCAGGAGTCCTTCCAAGAGGCGATGATCCACGCTTACCTGGGCCCGTAC
GTAGCAGACAATACCATTCCTTGGGCCTTCGAGGCCGAGGAGCGCCGGGC
TCGAGGAAGCCGGGGGCGAGACGagacaaggcgggggagggcaggacaCC
AGGCGCTGCATCCGCACATTCTGGAGATGACGTCGGGCCAGCAGCTGCTA
GGGTATGTAGAATCCGCGCCCGTCTCTTTCGAGGCCTTCCTGGAGGGTAT
GGCTGTCCAGGAGAAGCGCCTGGTGTCAAGGCCGGGGGCCGACATGGCaa
gcaagggggagggagagggggaggggggggcagacggCCTCTGCCTTCGA
TCGCAGCTGAGTGGGATGGTGTCATTGCCTGACAAGGAAAACTTTGCGTC
GCTGCGTGTGATGTGGCAAGGGCAATGTCTGGGACGAGGAATGAGGTTTT
GGGACtccgacaagaaggaggacgtagTGCTGATCGAGGCTTTCGCTTTG
CGGGACAACGAGGCCCCGCGTCCCGGCTGGTTCGGGCCACAGGCGCCTGA
GCAGACAGGCAACGAAGACATGATGGGTGTGGGCAGCTACGTGGTCAGGG
GCCTGGGGGCTCGACGCTTGCTCTCCAGCCATCCCGTGCGCCATGCAGCC
TCTGGTGCCGTgagccacgtcctcgtctcccatcGGACCCCGCTCGTCTC
tcacttccacctcctgcaggcggagggtggcGTGGAATGTCGCGTCAGCA
AGGGGGATTTGAAGGCGTACATTCCTTCCGAGTACtggcgcttccctccc
cgcagtCCCGACCATGACGTCGGGAGCTGGTACATCGAGCGAACGGGCTT
AGCTTCTCCAGAGACGGAAAGGACTTTGCGGGCGAAGCTGCGGGGCAAAA
TGCTGCCACCTGTGGTCATGATGTTGGTGTGTGCCTTCAAAACGCTTGat
aaggaggagcaggaggtcggaaaaggaggagggccgtcGCGGTTACAGGA
GACACTGAGAGGCTGGGTGCAAAGGATCATGTGAATGACTGCTGTACAGT
CAGCTTACCTAGTCCGACGTTTCATTGTGACCGGACAATGGTTACCTAGT
GTACGTAGCCGAGtgttcttctcctcctcagcgtcctcctcgtcctcctg
gtcTGACAAAGAACGGAGCAACCGATCCGTGCCATCACTGGGCGTACCTG
ACACAGACGATCCTTTCCTTATTCTGGGGGTGAGTATAGACGCCAGTGAA
TCAGAAATCAAAAACAATTTCTACCAATTGGCCAAACGGGTGCATCCTGA
CGCCGTTTTACGACAATCACGCGACGGAGTGAAAAATGGCAGAAGAGAGG
CATCGAATGCTGCGGCCGACTTTCAGAAGCTGGTGCGCGCCTACGAAATC
CTCTCAGACCCAACAAGGCGGGCGGAGTACATACTCAAGAACCCGCACCG
GCCACGTGGGTGTGGCTctggaggagtgggagcggCACCACCCTCTTGGG
GCGGCAAAGGTCCGAGCCCTGTAGATGTTTTCAACGCCTCGCTGCGCCAG
GGCCGCCGTCGGAGGGCCGGTCTGGGTGATGATCGCTTTGCGAAATGGAC
GCGGAGCAAGGAAAACACAGGtagcgaggacgaggagttGAAGGGAACAC
AAGgcgcggggccggggggaggaggcaaggctgCGAGGTCATGGGACGCT
GTCTCGCTCCTGAATCCCGGACTCTTGGGCCGCCTTCAGGAGTCCTTCCA
AGAGGCGATGATCCACGCTTACCTGGGCCCGTACGTAGCAGACAATACCA
TTCCTTGGGCCTTCGAGGCCGAGGAGCGCCGGGCTCGAGGAAGCCGGGGG
CGAGACGagacaaggcgggggagggcaggacaCCAGGCGCTGCATCCGCA
CATTCTGGAGATGACGTCGGGCCAGCAGCTGCTAGGGTATGTAGAATCCG
CGCCCGTCTCTTTCGAGGCCTTCCTGGAGGGTATGGCTGTCCAGGAGAAG
CGCCTGGTGTCAAGGCCGGGGGCCGACATGGCaagcaagggggagggaga
gggggaggggggggcagacggCCTCTGCCTTCGATCGCAGCTGAGTGGGA
TGGTGTCATTGCCTGACAAGGAAAACTTTGCGTCGCTGCGTGTGATGTGG
CAAGGGCAATGTCTGGGACGAGGAATGAGGTTTTGGGACtccgacaagaa
ggaggacgtagTGCTGATCGAGGCTTTCGCTTTGCGGGACAACGAGGCCC
CGCGTCCCGGCTGGTTCGGGCCACAGGCGCCTGAGCAGACAGGCAACGAA
GACATGATGGGTGTGGGCAGCTACGTGGTCAGGGGCCTGGGGGCTCGACG
CTTGCTCTCCAGCCATCCCGTGCGCCATGCAGCCTCTGGTGCCGTgagcc
acgtcctcgtctcccatcGGACCCCGCTCGTCTCtcacttccacctcctg
caggcggagggtggcGTGGAATGTCGCGTCAGCAAGGGGGATTTGAAGGC
GTACATTCCTTCCGAGTACtggcgcttccctccccgcagtCCCGACCATG
ACGTCGGGAGCTGGTACATCGAGCGAACGGGCTTAGCTTCTCCAGAGACG
GAAAGGACTTTGCGGGCGAAGCTGCGGGGCAAAATGCTGCCACCTGTGGT
CATGATGTTGGTGTGTGCCTTCAAAACGCTTGataaggaggagcaggagg
tcggaaaaggaggagggccgtcGCGGTTACAGGAGACACTGAGAGGCTGG
GTGCAAAGGATCATGTGA back to top
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