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Properties
| Property Name | Value |
|---|
| Product | Brix domain protein |
| Orig transcript id | gnl|cribi|Naga_100038g8.7714.mrna |
| Orig protein id | gnl|cribi|Naga_100038g8.7714 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:366996..368641 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3415 ID=rna3415|Name=rna3415|organism=Nannochloropsis gaditana|type=mRNA|length=1330bp
AACTAATCATCAATCTAGGAGGCCGCACTCTCCGAACAACAAGTTTTCCA
TGCGACGGGTTTTATCCAGGCCCCTATGGAAAAAGAGGGCAGTATCTTTC
CTCTTCGCCCTCGCCGTCATCGCAACTGCCCCGGAAACTTGCTTTGAGAA
ATTGCTCCGCTTCACAGTCTTTAACAAAGCAACGTACATGCACAGGCTTA
AACATTTGAAACAGTGGCAGCATGAGGCGGTTGGTCATCTGTTCACACAC
GGTACAAGCCTCGAACAACGCGCTCAGGCTGTCCTCTTTCAGAACCGTGA
TGCGTCATCGGACACGACCAAGACACCTAAGCACCGGTTCAACAACGACG
GCTTCTCCAGCCACTCCGGCTCCTGCTCCTCCTTCTACAAGTGCTACCGG
AGCCCCGGACATGTCACCTCCAAAGCCATCACCAGGCATCATTAGTCGAA
ACATCGGGAAAATTGTACTTCTAACATTATCCTCACTGATAGCATACCTT
TATCGTTCCTCAGAGAACCAAAAGCGGTCCAAAGCCCTCAAAGTCTACCT
GGAAGATCAACGCTCAATAGAGCCGTGGGAGATCGACGAGTTCCGCATGG
CGAACTGGGGCACGTGGGACCGAGCGCTCTTCCAAGAGGTTGCCAATGAG
CTGTATATGGCTTTTCCTGGAAGGAAAAGTGCTTCTTACCCAGCTTTGAT
CCGGGTCGTAGCCCACACGCTCGGTCGGCACCAGAAGCGATTGCAGCTAG
GACACTACCTGGACCGGGTCGTGCTATGCCTTGAGCCTGAGGAAGGGAAA
GAGGTGGACGTACTGACTTTCTTGTGTGCGCTGTCCTTGTCGCTGAATTT
CGATGTGGAGGAACGCGTAGGGGCACTGCACGATGCAGTCACTGCTGCCG
ATTGCGGGCATGCGGGCAGTTCGTCGGCAGGGAAGGGCGAGGAGGGAGTG
CGGAAGATTCATCGACGGGAACTGGAACAATTAGTAGCAGGCTTGGTGGC
CACTGCGCAGATACCGGCGGAGGCACTGGTGAAAGCGGATCCCGAGAGAA
GCTACCCATTTCAAGCTTACCAGGTCGCCAGTATCGAGGAGCTGGTTATG
AAAGCCAGCACAGAGGGTAAGGCCAAGCACGAGAAAGCGATGAAGGACGC
GGTGAAGGCTGGCTTGGAGCCGCCAAAACCTCCGCCGTTGGGAACGGAGC
AGGAAGATAAAGGCGTAGGAGAGGGGTTAAGTGCGAGGGAGTTAGTTGAG
GTCCTGTCCACGAAAGCGATCTGTGTTTGGGGCGAGTGTTATCAAGGGCG
TGACTGAAAGTAACCAAACAATTGTTTAGG back to topprotein sequence of rna3415 >rna3415-protein ID=rna3415-protein|Name=rna3415|organism=Nannochloropsis gaditana|type=polypeptide|length=383bp
MGKRRKRRTHVPVNPEQQQSLTEEERIPKTMVLRKGRTTPEAGALVTELR
RLMGPETAARLKERRTNRMKDFAAVAGHLGLTHILSLSQTPASLSLHIAR
FPRGPTLTFKVERYCLQHHVRATQKRPYESLSAYQTAPLVVLNNFGDVSS
PPYVKLMKITFQNMFPPLNVNTVRLTDCRRIVLYDYEADTGVVEQRHFAI
RAAPSELHKSVKRLVQTKIPRLGKMTDISEFILGPALQAYGGAGAASDSE
VEDEASHVILPDRFRGRGNLKSQKSAIRLAELGPRLRLRLMKVQRGFMEG
DVIYHDYIKKTPEEVRALEAKAKAERELKKRRREEQEGNVARKELKLKEA
QERKIERQAARAAKREAEDRGEGPDEQGGLAEG back to topmRNA from alignment at CM002461.1:366996..368641+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3415 ID=rna3415|Name=rna3415|organism=Nannochloropsis gaditana|type=mRNA|length=1646bp|location=Sequence derived from alignment at CM002461.1:366996..368641+ (Nannochloropsis gaditana)
TTGATGATTAGTTTTACCTGTCCTCTGAATGATGCCGTGGAAGTTCTCTG
GTTGCATGGCGATTGCCTaaccctttccccctcttcgttATCTCTCGCCC
AGCCTCTCATTAACCATGGGCAAGAGACGCAAGCGCCGAACGCACGTTCC
CGTCAACCCCGAGCAACAGCAGAgcttgacggaggaggaacggatACCCA
AGACGATGGTCTTGCGAAAGGGCCGAACAACACCGGAGGCGGGAGCTTTG
GTTACAGAATTACGAAGGCTCATGGGACCGGAGACTGCTGCTCGCCTCAA
GGAGAGACGTACTAATCGCATGAAAGACTTTGCAGCCGTTGCGGGACATT
TAGGGTTGACACACATTCTGTCACTGTCTCAGACACCGGCAAGTTTGAGC
TTGCATATCGCTCGTTTTCCGCGTGGCCCTACTTTGACTTTTAAGGTGGA
ACGTTACTGTCTGCAGCATCACGTTCGCGCCACCCAAAAAAGGCCATATG
AAAGCCTCAGCGCGTATCAGACAGCCCCGCTAGTTGTATTGAACAATTTT
GGGGATGTCAGTAGCCCACCGTATGTCAAATTAATGAAAATCACCTTCCA
AAACATGTTCCCCCCCTTGAACGTGAACACTGTTCGCCTGACCGACTGCC
GGCGTATCGTTCTTTACGATTATGAGGCGGACACTGGCGTGGTAGAGCAA
AGGCACTTCGCCATCCGGGCAGCACCGTCTGAGCTCCACAAAAGTGTAAA
ACGTCTGGTGCAAACCAAGATCCCCCGCCTTGGGAAAATGACTGATATCA
GGTAGGTGGGCCTCTCAAGCGAGCTGCCCGTCTCCTTGCTTCGCCCCCCC
GATCGTTGTGGCGTTGAGCCAGAGACCTGTGgccgtcctgctcctcaCAT
ACCATTGGGCGGAAATCCTgctcattcctccctccctctcccctttcacg
CGGACAGCGAGTTCATCCTGGGTCCGGCCTTACAGGCTTACGGCGGCGCC
GGAGCGGCCTCCGACAgcgaggtcgaggacgaagCCTCGCATgtcatcct
ccccgaccGCTTTCGAGGACGTGGGAATTTGAAATCTCAAAAATCGGCGA
TCCGCCTGGCGGAGCTCGGCCCTCGCCTGCGCTTGCGGCTGATGAAGGTG
CAGAGGGGCTTcatggagggggacgtgATATATCACGATTACATTAAAAA
GACCCCCGAGGAGgtgcgggccttggaggccaaggccaaggcggagaggg
aattgaagaagcgaagaagggaagagcaggaagggaatgtGGCGCGAAAG
GAGCTCAAGCTGAAAGAGGcacaggaaagaaaaatagaGAGGCAAGCCGC
TCGGGcagcaaagagggaggcagaggaccgaggggaggggccggacGAGC
AGGGCGGGTTGGCGGAGGGATAGGCCAGCTTGTCCGAGGTGAGCGAGGac
gcaggggaggggcggatggGCGAGCGAGCGCGGCGGTCCAACTCAAAAGA
AAAGGCAGGATTCTGAGACGAGGAGTCCGTGGCGACACAGATAGGGTTGG
CGCGTGAGTTTCTTTTTAATCAAATTGGCTGTGCACGTCGACCATGCGTC
CCCGTGGCAGGCTCAAGCAGCACCGAGAAAGGCCAAGGTCAAATCC back to topCoding sequence (CDS) from alignment at CM002461.1:366996..368641+ >rna3415 ID=rna3415|Name=rna3415|organism=Nannochloropsis gaditana|type=CDS|length=2304bp|location=Sequence derived from alignment at CM002461.1:366996..368641+ (Nannochloropsis gaditana)
ATGGGCAAGAGACGCAAGCGCCGAACGCACGTTCCCGTCAACCCCGAGCA
ACAGCAGAgcttgacggaggaggaacggatACCCAAGACGATGGTCTTGC
GAAAGGGCCGAACAACACCGGAGGCGGGAGCTTTGGTTACAGAATTACGA
AGGCTCATGGGACCGGAGACTGCTGCTCGCCTCAAGGAGAGACGTACTAA
TCGCATGAAAGACTTTGCAGCCGTTGCGGGACATTTAGGGTTGACACACA
TTCTGTCACTGTCTCAGACACCGGCAAGTTTGAGCTTGCATATCGCTCGT
TTTCCGCGTGGCCCTACTTTGACTTTTAAGGTGGAACGTTACTGTCTGCA
GCATCACGTTCGCGCCACCCAAAAAAGGCCATATGAAAGCCTCAGCGCGT
ATCAGACAGCCCCGCTAGTTGTATTGAACAATTTTGGGGATGTCAGTAGC
CCACCGTATGTCAAATTAATGAAAATCACCTTCCAAAACATGTTCCCCCC
CTTGAACGTGAACACTGTTCGCCTGACCGACTGCCGGCGTATCGTTCTTT
ACGATTATGAGGCGGACACTGGCGTGGTAGAGCAAAGGCACTTCGCCATC
CGGGCAGCACCGTCTGAGCTCCACAAAAGTGTAAAACGTCTGGTGCAAAC
CAAGATCCCCCGCCTTGGGAAAATGACTGATATCAGCGAGTTCATCCTGG
GTCCGGCCTTACAGGCTTACGGCGGCGCCGGAGCGGCCTCCGACAgcgag
gtcgaggacgaagCCTCGCATgtcatcctccccgaccGCTTTCGAGGACG
TGGGAATTTGAAATCTCAAAAATCGGCGATCCGCCTGGCGGAGCTCGGCC
CTCGCCTGCGCTTGCGGCTGATGAAGGTGCAGAGGGGCTTcatggagggg
gacgtgATATATCACGATTACATTAAAAAGACCCCCGAGGAGgtgcgggc
cttggaggccaaggccaaggcggagagggaattgaagaagcgaagaaggg
aagagcaggaagggaatgtGGCGCGAAAGGAGCTCAAGCTGAAAGAGGca
caggaaagaaaaatagaGAGGCAAGCCGCTCGGGcagcaaagagggaggc
agaggaccgaggggaggggccggacGAGCAGGGCGGGTTGGCGGAGGGAT
AGATGGGCAAGAGACGCAAGCGCCGAACGCACGTTCCCGTCAACCCCGAG
CAACAGCAGAgcttgacggaggaggaacggatACCCAAGACGATGGTCTT
GCGAAAGGGCCGAACAACACCGGAGGCGGGAGCTTTGGTTACAGAATTAC
GAAGGCTCATGGGACCGGAGACTGCTGCTCGCCTCAAGGAGAGACGTACT
AATCGCATGAAAGACTTTGCAGCCGTTGCGGGACATTTAGGGTTGACACA
CATTCTGTCACTGTCTCAGACACCGGCAAGTTTGAGCTTGCATATCGCTC
GTTTTCCGCGTGGCCCTACTTTGACTTTTAAGGTGGAACGTTACTGTCTG
CAGCATCACGTTCGCGCCACCCAAAAAAGGCCATATGAAAGCCTCAGCGC
GTATCAGACAGCCCCGCTAGTTGTATTGAACAATTTTGGGGATGTCAGTA
GCCCACCGTATGTCAAATTAATGAAAATCACCTTCCAAAACATGTTCCCC
CCCTTGAACGTGAACACTGTTCGCCTGACCGACTGCCGGCGTATCGTTCT
TTACGATTATGAGGCGGACACTGGCGTGGTAGAGCAAAGGCACTTCGCCA
TCCGGGCAGCACCGTCTGAGCTCCACAAAAGTGTAAAACGTCTGGTGCAA
ACCAAGATCCCCCGCCTTGGGAAAATGACTGATATCAGCGAGTTCATCCT
GGGTCCGGCCTTACAGGCTTACGGCGGCGCCGGAGCGGCCTCCGACAgcg
aggtcgaggacgaagCCTCGCATgtcatcctccccgaccGCTTTCGAGGA
CGTGGGAATTTGAAATCTCAAAAATCGGCGATCCGCCTGGCGGAGCTCGG
CCCTCGCCTGCGCTTGCGGCTGATGAAGGTGCAGAGGGGCTTcatggagg
gggacgtgATATATCACGATTACATTAAAAAGACCCCCGAGGAGgtgcgg
gccttggaggccaaggccaaggcggagagggaattgaagaagcgaagaag
ggaagagcaggaagggaatgtGGCGCGAAAGGAGCTCAAGCTGAAAGAGG
cacaggaaagaaaaatagaGAGGCAAGCCGCTCGGGcagcaaagagggag
gcagaggaccgaggggaggggccggacGAGCAGGGCGGGTTGGCGGAGGG
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