rna3410, rna3410 (mRNA) Nannochloropsis gaditana

Overview
Namerna3410
Unique Namerna3410
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1594
Alignment locationCM002461.1:348656..349266 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100038g2.7690.mrna
Orig protein idgnl|cribi|Naga_100038g2.7690
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:348656..349266 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100038g2gene3284Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27235.1cds3401Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3410rna3410-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3410 ID=rna3410|Name=rna3410|organism=Nannochloropsis gaditana|type=mRNA|length=1594bp
GACACTCAACAATATGCTACTGACAAGAAAGAAGCTCAGTTGCGATGCGG
CGATGGGCATGAGACAAGCTGAGGAGGGTGGCGCAGGAGGCAAGTAGTCG
GAGGCAATTTCTCAGAAACCACCCCTTGGGCTATCCGTCGTGCCGTGGAT
GTGGATGTATGAAAAGTGAATTATTTTGTCAACGTTGTAGCAAGGAGGAA
TTCTGGCCTTCTTTTAGCAAGCGCCCTGCAATAATTACGCAGTGACTTGG
GGAGGCGACCGACCTCCCCCCTCCGCCTCTTCCGCGATGACGCAACTCAG
ATCGATGCCCGGCCACACGATCATATGGCCCGCTTAGTCATTTCTTTCAC
ATCTTGACGCCTGCGTACAGTACTACAGAGGGCCTTCCATGGGGTGGCGG
AGTCGGCTTGAGGAGGCAAAAGGGAAGCATCGGCCACGGCTTAAGGACTG
GGCGCGGGATGGCTTCGCGCATAATCGCAGAAGTGAATTCGAGGCACTGG
CTCATTTGCCATCGAAACAACGTGATAACGAGGATAAAGAGTATCGAAGA
GGAGGTGTGGACCGGGTACATTGTCGTGACTTGAGCCTCGAGACGTTTAT
ACGGGAATACGAGCAGGCGAGCAAGCCTGTCATCATTCAAGGGATTCCGG
AAGCCGAGCATTGGAAGGCCACAGAAAACTGGACAAAGGAAAGTGCCTTG
CGTCGTCGCATTCGCAAGTACACATTCAAATGCGGCGAGGACGATGATGG
GCGTTCGGTTCGAGTGCGATTGAAACATTTTTTCAAGTATCTTGCAAAAC
AGAAAGATGATTCACCGCTCTACATCTTCGACTCAACCTACGATGACAAC
AAAGAAGCCAAAGTCCTGCTCGATGATTATAAAGTGCCTTCCTACTTTCC
GGACGATTTTTTCTCCTTGGTCGGGGAGCGGCGTCGGCCTCCGTATCGTT
GGTTTTTGGTAGGCCCCCGACGTAGTGGCACCAGTTTGCACATTGATCCC
TTGGGCACCTCGGCGTGGAACACCGTCCTGACGGGACGCAAGCGATGGGT
CCTCTTTCCCCCCCGTACATCTGCTAGCCTGGCCAAGGGCAAAGCCCTTT
ACCGTAAGGGTGAAGATGACGAGCCCATCAATTACTTCGTGGATATTTTG
CCGCGCATGCGGTCGTTACCAGCGACGGAAGGCCTGGTATTCCACGAGTT
TATTCAAGAACCCGGGGAGACCGTCTTCGTTCCTGGCGGATGGTGGCACG
CGGTCTTGAACCTAGAAGATTCTGTGGCGGTGACACAAAATTTTGCGAGC
CGCGCCAACTTTTCTGCGGTCTGGCGCAAGACTCGCTCGGGAAGGAAGAA
AATGGCGTGGCGGTGGCTGACGAAATTGGATGAGAGCTATCCCGAACTGG
GAAGGTTAGCGCGTAAATTGAACGAGATGGATGACTTCCACATGCTGACG
AAGGAGGAGATGGTAGAGAAGAAGCGGAGAAAAAAAGATAGAGAAGATGC
GAAGAAAAAAGAGGAAGAAGAGAGGCGAGCGAGGAAAGAGAGACAGAAAG
AGCAACGCAAATATCCCTCCTCTTCCTCCTCCTCTTCATCTTCT
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protein sequence of rna3410

>rna3410-protein ID=rna3410-protein|Name=rna3410|organism=Nannochloropsis gaditana|type=polypeptide|length=103bp
MKTKKDHDRGSLFSNCFSTDYTENALGWRQRFDYRFWSTVDVTASKLHSP
QRTYCLSDHRIPHILPFVFIYFFLITHQHDFNFSSHSVDVGGGVLYIVYL
MKC
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mRNA from alignment at CM002461.1:348656..349266-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3410 ID=rna3410|Name=rna3410|organism=Nannochloropsis gaditana|type=mRNA|length=611bp|location=Sequence derived from alignment at CM002461.1:348656..349266- (Nannochloropsis gaditana)
ACGCTTCATTCCCGCTTTAAAATGACATGGAGGAAAGACCACGACTTGTT
GCCTCCTTAACATTGAATAGTATTCAGGCTGTTCTCCAGGCCCCTTCGAA
GGTAAGTGAAACATTCTTGGACTAGAAAACTGCTTTCTAGGGCGAAAAGA
AACCAGTAGATGAAGACAAAAAAGGACCACGACCGTGGTAGTTTGTTCAG
CAATTGCTTTTCTACGGATTATACAGAGAACGCGTTAGGATGGCGGCAGC
GTTTCGATTACCGGTTTTGGAGCACTGTCGACGTCACAGCGAGTAAGCTG
CACAGCCCTCAGAGGACTTATTGCTTGAGCGATCATCGCATCCCTCACAT
ATTACCTTTTGTCTTCATTTACTTCTTTCTTATCACCCACCAACATGATT
TCAACTTCAGCTCGCATTCTGTGGATGTTGGTGGGGGCGTGTTGTACATC
GTTTATCTTATGAAGTGCTGAAAAGACAACAGTAGTTGAATCTTTCGCGA
CTTCACATCAGTGTAAAAGGCAACCCATGACCATTGAATCCTAGCAAACT
TTCAATAATTTACCTGTTATACCGACAAGTAGAGGCTAGACATTTAAGAA
GAAGCATTTTC
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Coding sequence (CDS) from alignment at CM002461.1:348656..349266-

>rna3410 ID=rna3410|Name=rna3410|organism=Nannochloropsis gaditana|type=CDS|length=312bp|location=Sequence derived from alignment at CM002461.1:348656..349266- (Nannochloropsis gaditana)
ATGAAGACAAAAAAGGACCACGACCGTGGTAGTTTGTTCAGCAATTGCTT
TTCTACGGATTATACAGAGAACGCGTTAGGATGGCGGCAGCGTTTCGATT
ACCGGTTTTGGAGCACTGTCGACGTCACAGCGAGTAAGCTGCACAGCCCT
CAGAGGACTTATTGCTTGAGCGATCATCGCATCCCTCACATATTACCTTT
TGTCTTCATTTACTTCTTTCTTATCACCCACCAACATGATTTCAACTTCA
GCTCGCATTCTGTGGATGTTGGTGGGGGCGTGTTGTACATCGTTTATCTT
ATGAAGTGCTGA
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Synonyms
Publications