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Properties
| Property Name | Value |
|---|
| Product | bifunctional arginine demethylase and lysyl-hydroxylase psr |
| Orig transcript id | gnl|cribi|Naga_100080g27.2856.mrna |
| Orig protein id | gnl|cribi|Naga_100080g27.2856 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:338505..340226 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3409 ID=rna3409|Name=rna3409|organism=Nannochloropsis gaditana|type=mRNA|length=1641bp
ACTAAGCGGGCCATATGATCGTGTGGCCGGGCATCGATCTGAGTTGCGTC
ATCGCGGAAGAGGCGGAGGGGGGAGGTCGGTCGCCTCCCCAAGTCACTGC
GTAATTATTGCAGGGCGCTTGCTAAAAGAAGGCCAGAATTCCTCCTTGCT
ACAACGTTGACAAAATAATTCACTTTTCATACATCCACATCCACGGCACG
ACGGATAGCCCAAGGGGTGGTTTCTGAGAAATTGCCTCCGACTACTTGCC
TCCTGCGCCACCCTCCTCAGCTTGTCTCATGCCCATCGCCGCATCGCAAC
TGAGCTTCTTTCTTGTCAGTAGCATATTGTTGAGTGTCGCCGCATTATCA
TGGAAGCGGAGACGAATCGGAAGCAAGTGGAGCGCTACCAACCTCATCCA
TCTTCGTGATTTCATAATGGAAGAGGTCTTGACAGACGAGGTAACGCCAT
CTCCTGACGGCTATACTGTTCTCCTGGGGCGTTTTACCTGGCAAGGCCGG
GATGAGAAGGCGATTCTCAAGATGCGGCCAGAGCAGCTGCCAGCAAGGGA
CAACGCGGTCACAAGAGAGCATTCACACACCGGAAAAGGTATTTTGAAGA
ATGGTTTCTGGGTGAGCTGTAAACGACAGAGCCTGCACCGAGCGCTGAGT
CACCTGAGCCTCCGCGTGCAGCTGGAAAGCGGGGCAGAGTACGGCTACTA
CTCAGGCAGCCTCTCCCCCCTGTCCATGGCATATCTGGGCATCCCTCTGA
CCTATCACATCGAAGTCATCGCCCCCGCCAGTCCCCGACAGATCGTCCGT
GCCCACGTGGAAAAGCGGGTGCTGATCCGGGAGTCACCGGCCCTGTACCG
CGTCGCCCTCGGTCCTCTGGCAGACGAGGTGCGGGGGGAGGGGCGTTCCC
TCCAATGGGTGTACAACATCCTTGAGCACAAGAAGGAAGCGGAGCGCATT
GTGTTTGAAGACCCTCCTGACCCCCTGGATTCGTCCAAGGGCTTCGTTCT
GGTCCCGGACCCCAAGTGGAAAAGCCACCCTGACCCCTCCCGGACTCCCA
AAGAGGAGTGGCGCCACCATCCGTCCACGTCTGGGCTTGCCTGTCTGGCC
ATCGTGCATGACCGCTCGATCGGCTCGCTCCGGGACTTGCGCCGAAGACA
CCTTCCACTTTTGCAGAGCCTGCTGGCTAAGGGATTGGCAGCGATCGAGG
CCGTGTACGGGGTAGGGAAGGAAGAGGTGCGGGTCTTCGTGCACTACGTC
CCCCAGTTCTTCCATTTCCACGTGCATTTCTCCAGGTTGAACCTTGCCCA
CGGGATTGAGGTTGAACGCGCGCACCTCCTCTCGGATGTCATCGAGAAGA
TTGAAAGGGCCCCGGTCGGAGAGGAGTACTACGAAAATGCTTCCATCTCC
TACACCGTGAAGAAGAGCGAGGAGCTTTACGGTCGACTGCAGAAAGCGGG
AGCGTGGGCGCCGGTGTAAAAGAGCGTGTACAGTTGCTACTTAAGTGGGA
TGGCTGCCATGCTTGTGTGCTGGTAACCATTCAATCAGAGGGAAATTTAG
CTCCATCATGCTTTTTTCTTCACGTTGGCATATCTCATTTTTCTTTCTGT
TGTAGCTGTCTATGAATGTATTATGAACCACATCGAAGATT back to topprotein sequence of rna3409 >rna3409-protein ID=rna3409-protein|Name=rna3409|organism=Nannochloropsis gaditana|type=polypeptide|length=402bp
MGWRSRLEEAKGKHRPRLKDWARDGFAHNRRSEFEALAHLPSKQRDNEDK
EYRRGGVDRVHCRDLSLETFIREYEQASKPVIIQGIPEAEHWKATENWTK
ESALRRRIRKYTFKCGEDDDGRSVRVRLKHFFKYLAKQKDDSPLYIFDST
YDDNKEAKVLLDDYKVPSYFPDDFFSLVGERRRPPYRWFLVGPRRSGTSL
HIDPLGTSAWNTVLTGRKRWVLFPPRTSASLAKGKALYRKGEDDEPINYF
VDILPRMRSLPATEGLVFHEFIQEPGETVFVPGGWWHAVLNLEDSVAVTQ
NFASRANFSAVWRKTRSGRKKMAWRWLTKLDESYPELGRLARKLNEMDDF
HMLTKEEMVEKKRRKKDREDAKKKEEEERRARKERQKEQRKYPSSSSSSS
SS back to topmRNA from alignment at CM002461.1:338505..340226+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3409 ID=rna3409|Name=rna3409|organism=Nannochloropsis gaditana|type=mRNA|length=1722bp|location=Sequence derived from alignment at CM002461.1:338505..340226+ (Nannochloropsis gaditana)
GACACTCAACAATATGCTACTGACAAGAAAGAAGCTCAGTTGCGATGCGG
CGATGGGCATGAGACAAgctgaggagggtggcgcaGGAGGCAAGTAGTCG
GAGGCAATTTCTCAGAAACCACCCCTTGGGCTATCCGTCGTGCCGTGGAT
GTGGATGTATGAAAAGTGAATTATTTTGTCAACGTTGTAGCAAGGAGGAA
TTCTGGCCTTCTTTTAGCAAGCGCCCTGCAATAATTACGCAGTGACTTGG
GGAGGCgaccgacctcccccctccgcctcttccgcgATGACGCAACTCAG
ATCGATGCCCGGCCACACGATCATATGGCCCGCTTAGTCATTTCTTTCAC
ATCTTGACGCCTGCGTACAGTACTACAGAGGGCCTTCCATGGGGTGGCGG
AGTCGGCTTGAGGAGGCAAAAGGGAAGCATCGGCCACGGCTTAAGGACTG
GGCGCGGGATGGCTTCGCGCATAATCGCAGAAGTGAATTCGAGGCACTGG
CTCATTTGCCATCGAAACAACGTGATAACGAGGATAAAGAGTATCGAAGA
GGAGGTGTGGACCGGGTACATTGTCGTGACTTGAGCCTCGAGACGTTTAT
ACGGGAATACGAGCAGGCGAGCAAGCCTGTCATCATTCAAGGGATTCCGG
AAGCCGAGCATTGGAAGGCCACAGAAAACTGGACAAAGGAAAGTGCCTTG
CGTCGTCGCATTCGCAAGTACACATTCAAATgcggcgaggacgatgatgg
gCGTTCGGTTCGAGTGCGATTGAAACATTTTTTCAAGTATCTTGCAAAAC
AGAAAGATGATTCACCGCTCTACATCTTCGACTCAACCTACGATGACAAC
AAAGAAGCCAAAGTCCTGCTCGATGATTATAAAGTGCCTTCCTACTTTCC
GGACGATTTTTTCTCCTTGGTCGGGGAGCGGCGTCGGCCTCCGTATCGTT
GGTTTTTGGTAGGCCCCCGACGTAGTGGCACCAGTTTGCACATTGATCCC
TTGGGCACCTCGGCGTGGAACACCGTCCTGACGGGACGCAAGCGATgggt
cctctttcccccccgtaCATCTGCTAGCCTGGCCAAGGGCAAAGCCCTTT
ACCGTAAGGGTGAAGATGACGAGCCCATCAATTACTTCGTGGATATTTTG
CCGCGCATGCGGTCGTTACCAGCGACGGAAGGCCTGGTATTCCACGAGTT
TATTCAAGAACCCGGGGAGACCGTCTTCGTTCCTGGCGGATGGTGGCACG
GTATGTGTGATTGGCTTGAAACGTCCTTTGGCCTGTGTCCATGTGTGTGG
TGCTTGCATTTTGCGCTTCTCTTGCGTGCGGTTAGGATGTGAGGTCTCAC
AGTAACACACATCCATGCTCCATCACAGCGGTCTTGAACCTAGAAGATTC
TGTGGCGGTGACACAAAATTTTGCGAGCCGCGCCAACTTTTCTGCGGTCT
GGCGCAAGACTCGctcgggaaggaagaaaatggcgtggcggtggctgACG
AAATTGGATGAGAGCTATCCCGAACTGGGAAGGTTAGCGCGTAAATTGAA
CGAGATGGATGACTTCCACATGctgacgaaggaggagatggtagagaaga
agcggagaaaaaaagatAGAGAAGAtgcgaagaaaaaagaggaagaagag
aggcgagcgaggaaagagagacagaAAGAGCAACGCAAatatccctcctc
ttcctcctcctcttcatcttct back to topCoding sequence (CDS) from alignment at CM002461.1:338505..340226+ >rna3409 ID=rna3409|Name=rna3409|organism=Nannochloropsis gaditana|type=CDS|length=2412bp|location=Sequence derived from alignment at CM002461.1:338505..340226+ (Nannochloropsis gaditana)
ATGGGGTGGCGGAGTCGGCTTGAGGAGGCAAAAGGGAAGCATCGGCCACG
GCTTAAGGACTGGGCGCGGGATGGCTTCGCGCATAATCGCAGAAGTGAAT
TCGAGGCACTGGCTCATTTGCCATCGAAACAACGTGATAACGAGGATAAA
GAGTATCGAAGAGGAGGTGTGGACCGGGTACATTGTCGTGACTTGAGCCT
CGAGACGTTTATACGGGAATACGAGCAGGCGAGCAAGCCTGTCATCATTC
AAGGGATTCCGGAAGCCGAGCATTGGAAGGCCACAGAAAACTGGACAAAG
GAAAGTGCCTTGCGTCGTCGCATTCGCAAGTACACATTCAAATgcggcga
ggacgatgatgggCGTTCGGTTCGAGTGCGATTGAAACATTTTTTCAAGT
ATCTTGCAAAACAGAAAGATGATTCACCGCTCTACATCTTCGACTCAACC
TACGATGACAACAAAGAAGCCAAAGTCCTGCTCGATGATTATAAAGTGCC
TTCCTACTTTCCGGACGATTTTTTCTCCTTGGTCGGGGAGCGGCGTCGGC
CTCCGTATCGTTGGTTTTTGGTAGGCCCCCGACGTAGTGGCACCAGTTTG
CACATTGATCCCTTGGGCACCTCGGCGTGGAACACCGTCCTGACGGGACG
CAAGCGATgggtcctctttcccccccgtaCATCTGCTAGCCTGGCCAAGG
GCAAAGCCCTTTACCGTAAGGGTGAAGATGACGAGCCCATCAATTACTTC
GTGGATATTTTGCCGCGCATGCGGTCGTTACCAGCGACGGAAGGCCTGGT
ATTCCACGAGTTTATTCAAGAACCCGGGGAGACCGTCTTCGTTCCTGGCG
GATGGTGGCACGCGGTCTTGAACCTAGAAGATTCTGTGGCGGTGACACAA
AATTTTGCGAGCCGCGCCAACTTTTCTGCGGTCTGGCGCAAGACTCGctc
gggaaggaagaaaatggcgtggcggtggctgACGAAATTGGATGAGAGCT
ATCCCGAACTGGGAAGGTTAGCGCGTAAATTGAACGAGATGGATGACTTC
CACATGctgacgaaggaggagatggtagagaagaagcggagaaaaaaaga
tAGAGAAGAtgcgaagaaaaaagaggaagaagagaggcgagcgaggaaag
agagacagaAAGAGCAACGCAAatatccctcctcttcctcctcctcttca
tcttctATGGGGTGGCGGAGTCGGCTTGAGGAGGCAAAAGGGAAGCATCG
GCCACGGCTTAAGGACTGGGCGCGGGATGGCTTCGCGCATAATCGCAGAA
GTGAATTCGAGGCACTGGCTCATTTGCCATCGAAACAACGTGATAACGAG
GATAAAGAGTATCGAAGAGGAGGTGTGGACCGGGTACATTGTCGTGACTT
GAGCCTCGAGACGTTTATACGGGAATACGAGCAGGCGAGCAAGCCTGTCA
TCATTCAAGGGATTCCGGAAGCCGAGCATTGGAAGGCCACAGAAAACTGG
ACAAAGGAAAGTGCCTTGCGTCGTCGCATTCGCAAGTACACATTCAAATg
cggcgaggacgatgatgggCGTTCGGTTCGAGTGCGATTGAAACATTTTT
TCAAGTATCTTGCAAAACAGAAAGATGATTCACCGCTCTACATCTTCGAC
TCAACCTACGATGACAACAAAGAAGCCAAAGTCCTGCTCGATGATTATAA
AGTGCCTTCCTACTTTCCGGACGATTTTTTCTCCTTGGTCGGGGAGCGGC
GTCGGCCTCCGTATCGTTGGTTTTTGGTAGGCCCCCGACGTAGTGGCACC
AGTTTGCACATTGATCCCTTGGGCACCTCGGCGTGGAACACCGTCCTGAC
GGGACGCAAGCGATgggtcctctttcccccccgtaCATCTGCTAGCCTGG
CCAAGGGCAAAGCCCTTTACCGTAAGGGTGAAGATGACGAGCCCATCAAT
TACTTCGTGGATATTTTGCCGCGCATGCGGTCGTTACCAGCGACGGAAGG
CCTGGTATTCCACGAGTTTATTCAAGAACCCGGGGAGACCGTCTTCGTTC
CTGGCGGATGGTGGCACGCGGTCTTGAACCTAGAAGATTCTGTGGCGGTG
ACACAAAATTTTGCGAGCCGCGCCAACTTTTCTGCGGTCTGGCGCAAGAC
TCGctcgggaaggaagaaaatggcgtggcggtggctgACGAAATTGGATG
AGAGCTATCCCGAACTGGGAAGGTTAGCGCGTAAATTGAACGAGATGGAT
GACTTCCACATGctgacgaaggaggagatggtagagaagaagcggagaaa
aaaagatAGAGAAGAtgcgaagaaaaaagaggaagaagagaggcgagcga
ggaaagagagacagaAAGAGCAACGCAAatatccctcctcttcctcctcc
tcttcatcttct back to top
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