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Properties
| Property Name | Value |
|---|
| Product | dna replication factor c subunit |
| Orig transcript id | gnl|cribi|Naga_100080g2.2846.mrna |
| Orig protein id | gnl|cribi|Naga_100080g2.2846 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:284577..286310 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3386 ID=rna3386|Name=rna3386|organism=Nannochloropsis gaditana|type=mRNA|length=1509bp
ATGCATGCCGAAAAGACTGCTCACATTCTGTGTCGTTACGGGCTCACAGC
ACACTGGGGACGTGCCGGCGACCGCTGCCACGCTCCGCAGTCTCTTCGCC
TCTCCCTCTTCCCCTGCCCCCCCGGCTCCCCCCCCCCTCGTCCTCAAATC
CCTTCTTGTTGGCTGCGAGTCCGGGGTTGGACTCTACGATGCGCTCATTC
AGGAACTTCGTCAGTCTACCATCCCAGAGAGGGAGGCAGGGGGGGAGGGG
AGGAGGGCGGGAAGGAGGACACGCCTTTCCCCCCCTCGACTTTGGGAGGG
AACGTGTTTGCCCTTTCCTGTGCCCGGCGGAACAAATATTTGATGGGGGA
AGCGATCCGATCCGCTGGTCTTCGCGCGGCCAAACAACTCATGACTGCCT
CGTGGGAGGAGGTTCCCCCCTTCCTCGAGACCTGCCGCCGGCCCTCCCCC
TCGCCCTCCGCCCCGTCCTCCCTAAAAGTGGTCCTGAAGCCTCTCTCCTC
GGCAGGTTCGGATGGGGTGGTGTTCGCTTCTTCAAAGGAGGAAGCCCGCG
AGGCGTTTGAGAGGATATTGGCAAGCACGAACGTCTTCGGAGAGAGGAAC
ACGGCAGTGCTCATTCAGGAATATTTGCAAGGCACCGAATTTGTGGTGGA
CTCCATCTCCCACGAGGGCGAACACCGCGTAACGGCCATTTGGCGATACG
ATAAACGGCCGCTCAACGGCGCGGCCTTCGTCTACTACGGCCTCCGGCTG
TGGGAAGGCAAGGACGGGAGGGAAATGGACTGGGCCCTCGCCCGGTACGC
ACATGCATGCTTGGATGCCCTGGGGGTCCGTAACGGCTTCAGTCACGCGG
AAGTGATGTGGTTGGAAGGGGAGGCGGGAGGCGCGGGAGGCCCCTGCCTG
GTGGAGGTGGGCGCGCGGCCGCATGGTGGGGAAGGGACTTTCGTCTCCTT
AACAGCTGAGGCGATCGGTTACAACCAGCTTTCGGTCGCCTTGGACCTGA
TCCGAGACCCTCAGGCTCTGGCCGGGATCCCCCTCCTCCCCCCTCCCTTG
AAGGCGCACGCAGCTGAGGTATGTCTGGTCTCTCGGAAAAGCGGCCGTTT
GCTTCGGCATTTTTTGACGGAGCACGTGGCGGGAAACACGCTTCCTTCGC
TTAAGTCGGTGGAATTGCACGTGGCAGTGGGAGATTACTTGAAAAAAACA
GTGGACATGCTCTCTTCGCCCGGTTCGGCGATTTTAGCCCATGGGGACGC
CCGGGTGCTGGAGCGAGACTACGAATGTATCCACGAAATGGATTTGTTTC
TAGTGGAGGAAGGGGGGGGGGAAGGGGAGGAGGAAGGGGAAGGGAGTTTG
ACGACGGGAGCGGGGGGAGGTGAGGGAGGAAGGAGGGTCAACGAGGTGGA
GGACTCCTGGAGTCTACGAGGCAGAAACAGAGGACGGCTCCCTCTGACCA
TGTGTGCGTGTGCAACCCGTTGCGGAAACAGCTTTTCAAATTTTGAGTTC
AAACTTTAA back to topprotein sequence of rna3386 >rna3386-protein ID=rna3386-protein|Name=rna3386|organism=Nannochloropsis gaditana|type=polypeptide|length=258bp
MFGTGSGQGGKDVAVAKAQQTKVQPWVEKYRPQGVDDISYQDEVVKTLKN
AIQTGTLPHLLFYGPPGTGKTSTILAVARSLFGPEYRSRILELNASDERG
IKVVREKVKQFAQFTVTGLEKTAGYPCPPFKIIILDEADTMTTEAQAALR
RTMETYSKITRFCLVCNYVTRIIEPLASRCAKFRFRPLSREVMEARLRAI
GAAEGASVTQEMMDAILTVADGCVLTFFPSPSFPPCLPPSPSSLSGGFPL
VPPRRFIS back to topmRNA from alignment at CM002461.1:284577..286310+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3386 ID=rna3386|Name=rna3386|organism=Nannochloropsis gaditana|type=mRNA|length=1734bp|location=Sequence derived from alignment at CM002461.1:284577..286310+ (Nannochloropsis gaditana)
TGTGCAGGCTGTCAAAGAAAAGTCTCTATACAACTCATGTTTGGCACGGG
CAGCGGGCAGGGTGGCAAAGATGTCGCGGTCGCGAAGGCTCAGCAGACGA
AGGTGAGTGCAGCAATTGTATGTTTTCTTCGACCATCATCTTGTCCTCTG
ATTTACGAAAGCCGGCCGCTTGTGGCGCATTCGTCGTGCACATTTGGATT
TAAAAATGTTGATCAATTTGTATATGTTTTTTCCAAACGATAGGCCTTGG
TGCGTGTGTGTAGGAAATTGTGAGCGCCCTCTAAAGTCtatccacctctt
cctcctccaccacgcctgTTTTATCTTCATTACACGCATCAGGTGCAACC
ATGGGTGGAGAAATATCGACCTCAAGGCGTGGACGACATTTCATACCAAG
ACGAAGTGGTTAAAACCCTTAAAAATGCGATTCAAACCGGTACTTTGCCA
CACCTGTTGTTCTACGGTCCTCCGGGGACGGGCAAAACCTCGACGATCCT
GGCAGTGGCACGCTCTTTGTTTGGCCCTGAATACCGATCACGCATACTGG
AACTGAATGCCTCGGACGAACGAGGGATCAAGGTTGTGCGAGAGAAAGTC
AAGCAGTTCGCTCAGTTCACGGTGACCGGCTTGGAGAAAACAGCTGGCta
cccgtgcccccccttcaaGATCATcatcctggacgaggccgacACCATGA
CTACCGAGGCCCAGGCGGCCTTGCGACGGACGATGGAGGTAAtgcatgaa
gaggaagggaagggggaggggagggagggagcagagaGGGGCCCTGGAAG
GCGCGCGCTCTCCGTCGTTCATGTGCCATGCCAATCATCCCCTCGTCGCC
TATGCCACGCAGACGTACTCAAAAATCACTCGCTTCTGCCTGGTATGCAA
CTACGTGACGCGTATCATCGAGCCCCTGGCCTCCCGATGCGCCAAATTCC
GTTTCCGTCCCCTGTCTCGGGAGGTCATGGAGGCCCGGCTGCGTGCCATT
GGGGCCGCAGAAGGCGCCTCGGTGACACAGGAAATGATGGATGCCATATT
AACGGTCGCCGACGGGTGCGTGCtgactttctttccctctccctccttcc
ctccctgcctgcctccctcaccctcttccctctctggTGGATTCCCCTTG
GTTCCTCCCCGTCGGTTCATTTCTTGACAGAGACATGCGCAAGGCCGTGA
CGACGCTGCAAAGCGCGCATCAATTCTACGGGGGGAGCTCCTCCATTACG
CCGGACGCGGTGCGGGAGATGAGCGGGGGGGTGCCCGACGGCCTGGTTCA
GAGTCTCTGGGAAGCAATCAGCACGCAGTCCTTCGACAATTTGAAGGCGC
AATGTGACGAGGTGGAAATGGCTGGCTACCCCACCATGGCCGTGCTGCAC
CGCCTCTTCgacctggtggtggcggaggaaggggtggaggacgcgaagaa
ggcggtggtgatGGCGGGACTGGCGCGGGCAGAGAAGCTGATCATCGATG
GGGCCAATGAGAGCTTGCAGTTGTTGGATATTTGTGCATTGATGATGCGG
ACATTTTTGGGTAAAAACAAAAGCGCAGGAAGCGGCGTGTGCGTGAGCAC
ACCCATGGTGCtttaggagggagggagggagggcgggaggtgggaggcag
gggtggaaggaaggagaaggagatgcaAGCTGATTGGCAGGCGGTTTAAA
AGCACAAAAGAGACGTACAACCAGGCAATGATAG back to topCoding sequence (CDS) from alignment at CM002461.1:284577..286310+ >rna3386 ID=rna3386|Name=rna3386|organism=Nannochloropsis gaditana|type=CDS|length=2331bp|location=Sequence derived from alignment at CM002461.1:284577..286310+ (Nannochloropsis gaditana)
ATGTTTGGCACGGGCAGCGGGCAGGGTGGCAAAGATGTCGCGGTCGCGAA
GGCTCAGCAGACGAAGGTGCAACCATGGGTGGAGAAATATCGACCTCAAG
GCGTGGACGACATTTCATACCAAGACGAAGTGGTTAAAACCCTTAAAAAT
GCGATTCAAACCGGTACTTTGCCACACCTGTTGTTCTACGGTCCTCCGGG
GACGGGCAAAACCTCGACGATCCTGGCAGTGGCACGCTCTTTGTTTGGCC
CTGAATACCGATCACGCATACTGGAACTGAATGCCTCGGACGAACGAGGG
ATCAAGGTTGTGCGAGAGAAAGTCAAGCAGTTCGCTCAGTTCACGGTGAC
CGGCTTGGAGAAAACAGCTGGCtacccgtgcccccccttcaaGATCATca
tcctggacgaggccgacACCATGACTACCGAGGCCCAGGCGGCCTTGCGA
CGGACGATGGAGACGTACTCAAAAATCACTCGCTTCTGCCTGGTATGCAA
CTACGTGACGCGTATCATCGAGCCCCTGGCCTCCCGATGCGCCAAATTCC
GTTTCCGTCCCCTGTCTCGGGAGGTCATGGAGGCCCGGCTGCGTGCCATT
GGGGCCGCAGAAGGCGCCTCGGTGACACAGGAAATGATGGATGCCATATT
AACGGTCGCCGACGGGTGCGTGCtgactttctttccctctccctccttcc
ctccctgcctgcctccctcaccctcttccctctctggTGGATTCCCCTTG
GTTCCTCCCCGTCGGTTCATTTCTTGAATGTTTGGCACGGGCAGCGGGCA
GGGTGGCAAAGATGTCGCGGTCGCGAAGGCTCAGCAGACGAAGGTGCAAC
CATGGGTGGAGAAATATCGACCTCAAGGCGTGGACGACATTTCATACCAA
GACGAAGTGGTTAAAACCCTTAAAAATGCGATTCAAACCGGTACTTTGCC
ACACCTGTTGTTCTACGGTCCTCCGGGGACGGGCAAAACCTCGACGATCC
TGGCAGTGGCACGCTCTTTGTTTGGCCCTGAATACCGATCACGCATACTG
GAACTGAATGCCTCGGACGAACGAGGGATCAAGGTTGTGCGAGAGAAAGT
CAAGCAGTTCGCTCAGTTCACGGTGACCGGCTTGGAGAAAACAGCTGGCt
acccgtgcccccccttcaaGATCATcatcctggacgaggccgacACCATG
ACTACCGAGGCCCAGGCGGCCTTGCGACGGACGATGGAGACGTACTCAAA
AATCACTCGCTTCTGCCTGGTATGCAACTACGTGACGCGTATCATCGAGC
CCCTGGCCTCCCGATGCGCCAAATTCCGTTTCCGTCCCCTGTCTCGGGAG
GTCATGGAGGCCCGGCTGCGTGCCATTGGGGCCGCAGAAGGCGCCTCGGT
GACACAGGAAATGATGGATGCCATATTAACGGTCGCCGACGGGTGCGTGC
tgactttctttccctctccctccttccctccctgcctgcctccctcaccc
tcttccctctctggTGGATTCCCCTTGGTTCCTCCCCGTCGGTTCATTTC
TTGAATGTTTGGCACGGGCAGCGGGCAGGGTGGCAAAGATGTCGCGGTCG
CGAAGGCTCAGCAGACGAAGGTGCAACCATGGGTGGAGAAATATCGACCT
CAAGGCGTGGACGACATTTCATACCAAGACGAAGTGGTTAAAACCCTTAA
AAATGCGATTCAAACCGGTACTTTGCCACACCTGTTGTTCTACGGTCCTC
CGGGGACGGGCAAAACCTCGACGATCCTGGCAGTGGCACGCTCTTTGTTT
GGCCCTGAATACCGATCACGCATACTGGAACTGAATGCCTCGGACGAACG
AGGGATCAAGGTTGTGCGAGAGAAAGTCAAGCAGTTCGCTCAGTTCACGG
TGACCGGCTTGGAGAAAACAGCTGGCtacccgtgcccccccttcaaGATC
ATcatcctggacgaggccgacACCATGACTACCGAGGCCCAGGCGGCCTT
GCGACGGACGATGGAGACGTACTCAAAAATCACTCGCTTCTGCCTGGTAT
GCAACTACGTGACGCGTATCATCGAGCCCCTGGCCTCCCGATGCGCCAAA
TTCCGTTTCCGTCCCCTGTCTCGGGAGGTCATGGAGGCCCGGCTGCGTGC
CATTGGGGCCGCAGAAGGCGCCTCGGTGACACAGGAAATGATGGATGCCA
TATTAACGGTCGCCGACGGGTGCGTGCtgactttctttccctctccctcc
ttccctccctgcctgcctccctcaccctcttccctctctggTGGATTCCC
CTTGGTTCCTCCCCGTCGGTTCATTTCTTGA back to top
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