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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101737g2.9598.mrna |
| Orig protein id | gnl|cribi|Naga_101737g2.9598 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:267175..267717 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3380 ID=rna3380|Name=rna3380|organism=Nannochloropsis gaditana|type=mRNA|length=883bp
TGACCAGGGAGGTCATGAGTCCTATGCATCAATGCTCGTAAGATGCAGAA
AAAAATACACGCAGGCAAAACAAGACGTGCATATCAGGAATGTCATGGCA
CCGGACACAATTGCAAGGAGTTTGAATAAAGTCATGCTTCCCCTTAAAGT
CCTCTTCAAGTCTTCGATATGAGTAGGCGAGGTGCCACCTGGGAGGTGCA
ACCCGCAATCATGCTTTTCAGCACGCCTTGTTCCTGCGCGATGCCTCAAG
GTCCTGAAGTAAGCTGTTTTTGAGAAACATTTTTAACTCTTCTCGGCCTC
CACGTCCAGGGATGGTCAGGAGGGCCGGCGTCAAACATGAAGCATGTAAG
AATACAGCCGGGGCCCGCATTACCTCCTCCCCACGTTTCCTGCTCCCATT
CCTCCTTTTGTCCTCATGTGCCGCCGTGAGAGGCGCTTTTCCCTTCCTGG
AGGGAGAACGAGGTAGCATGGACAACCGTGGAGAGAGCAGAAGAAACCGA
TGGAGGGATGTCTCACTGTATCAAATGTCCTCTGAGAAGCCCGGGACGTA
CGTTCGACGGTGCCCGACGCCTCGTGGACTTCTTTTCCCGCTCTCTGTAG
ACCCCTCCGAGTGGCCGGGCTGCGACGACGCCTACCACGTGACCTGGTCG
CTGGATGTGGGAGATCATTTGAGGGGGCTCTCCGCCACCAACTTCGCCAA
GCTCTCTCGCTCCATGGGCTACTGCCCTCACCGACGGTGCCAGTTGTCCG
ACGTGGGGAACAGTGCCCGACCAAGCCAGTGTCCGGAGGGGCTCTGCTAC
ACGAAACTGGAGAAAGGATCCCCTACCTACGGTGCTTGTTGCTTTCAGGA
GGACGGTCAGAGAGGGAGCGAGGGAGGGAGAGA back to topprotein sequence of rna3380 >rna3380-protein ID=rna3380-protein|Name=rna3380|organism=Nannochloropsis gaditana|type=polypeptide|length=79bp
MGSFGPGHSPSSRGANNALSETLPKHVGLLGPRVVVQNTAWVFMEAPPFQ
VRPLRCQDIFLADHPHYHPEPVDELLDRN back to topmRNA from alignment at CM002461.1:267175..267717+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3380 ID=rna3380|Name=rna3380|organism=Nannochloropsis gaditana|type=mRNA|length=543bp|location=Sequence derived from alignment at CM002461.1:267175..267717+ (Nannochloropsis gaditana)
ATGGGCTCTTTTGGCCCTGGTCACAGTCCCTCTTCACGAGGGGCAAATAA
CGCGCTATCAGGTGCGTGGTCCCTCTCCAGGTTTGGAGTAATCAAGTTCC
ACGTATTACCAAGTAGCTCAACCATGTTTAAGGCCTTCTCATCCCCTGTC
TTGCATTATTTTTTTCCAGAGACCCTCCCTAAGCACGTCGGTCTCTTGGG
CCCCCGGGTGGTGGTGCAAAACACAGCATGGGTCTTCATGGGTAAGCGGG
GCACATGCGCCATAAAAATGCCGTGCCATCGCAGCATCTGGCggtccatt
tccctcctccgaccgTAGGCGTGGCGTTCTTGCTTGCTCATGTCACTgcg
cccctttctcttttctccctttctccgtcctTTACTGCAATGCATCCTCA
GGGGTCTTCAGCGTCGCCTACTTGCTCTTTCAAAAGaagctcctcccttt
caagtACGCCCGCTTCGCTGCCAAGATATTTTTTTGGCCGACCATCCCCA
TTACCATCCTGAACCGGTGGACGAATTATTGGACCGCAATTga back to topCoding sequence (CDS) from alignment at CM002461.1:267175..267717+ >rna3380 ID=rna3380|Name=rna3380|organism=Nannochloropsis gaditana|type=CDS|length=720bp|location=Sequence derived from alignment at CM002461.1:267175..267717+ (Nannochloropsis gaditana)
ATGGGCTCTTTTGGCCCTGGTCACAGTCCCTCTTCACGAGGGGCAAATAA
CGCGCTATCAGAGACCCTCCCTAAGCACGTCGGTCTCTTGGGCCCCCGGG
TGGTGGTGCAAAACACAGCATGGGTCTTCATGGaagctcctccctttcaa
gtACGCCCGCTTCGCTGCCAAGATATTTTTTTGGCCGACCATCCCCATTA
CCATCCTGAACCGGTGGACGAATTATTGGACCGCAATTgaATGGGCTCTT
TTGGCCCTGGTCACAGTCCCTCTTCACGAGGGGCAAATAACGCGCTATCA
GAGACCCTCCCTAAGCACGTCGGTCTCTTGGGCCCCCGGGTGGTGGTGCA
AAACACAGCATGGGTCTTCATGGaagctcctccctttcaagtACGCCCGC
TTCGCTGCCAAGATATTTTTTTGGCCGACCATCCCCATTACCATCCTGAA
CCGGTGGACGAATTATTGGACCGCAATTgaATGGGCTCTTTTGGCCCTGG
TCACAGTCCCTCTTCACGAGGGGCAAATAACGCGCTATCAGAGACCCTCC
CTAAGCACGTCGGTCTCTTGGGCCCCCGGGTGGTGGTGCAAAACACAGCA
TGGGTCTTCATGGaagctcctccctttcaagtACGCCCGCTTCGCTGCCA
AGATATTTTTTTGGCCGACCATCCCCATTACCATCCTGAACCGGTGGACG
AATTATTGGACCGCAATTga back to top
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