rna3376, rna3376 (mRNA) Nannochloropsis gaditana

Overview
Namerna3376
Unique Namerna3376
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length534
Alignment locationCM002461.1:256132..257527 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101338g1.1411.mrna
Orig protein idgnl|cribi|Naga_101338g1.1411
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:256132..257527 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101338g1gene3251Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27306.1cds3367Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3376rna3376-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3376 ID=rna3376|Name=rna3376|organism=Nannochloropsis gaditana|type=mRNA|length=534bp
ACACCCGTCCTCAACCCCTACTTCGGCGGGGAAGTGACGGAGAAGATGGA
GCTGGGCCTTCTGGCCAAGGGATTCGCCCAGACGATCCTCGCCTTCGTTC
GCGCCATAAATCCCGACATGAAGCACAGCTTCGGTGACGACAACAACACC
ACCCTTCCTCACATAACAGTACCCCTCTTTCACGCGGCGGAGAGCTTCAT
CATCACCCCTGCCGGCGCAGCCCCGCCTCCTCTCGGGATTAATTTTGTCA
CCTCCGAGACCGATAAAGCCCGACGGGCGGGGAAAATCCCCCTCCCTCGC
TTCGACACCACCTCCACCATCTCCTTCAGCTTCCACTCCATGTTCCTAGA
CTTTCAGACCTGGCGCTTGGTCTCCTTCCCCTTCATCCGCTCTCTGGATC
TGCACCTGATGTGGGCGAGGAGCGCCGTCCGGTGAGGGAGGGAGGGAGGG
AGGGAGGGGAGGGAGAGGAAGGAGCAACTAGTAGTGGTCGGTGTGTAAAA
GGGCCGTTCTCGCCTACAATGGAAGCTCCTCTCC
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protein sequence of rna3376

>rna3376-protein ID=rna3376-protein|Name=rna3376|organism=Nannochloropsis gaditana|type=polypeptide|length=420bp
MDTQPPPTTTSIVPGATLIVEDACDFFDLSDFLFRARLAPGKLALAVTGT
KEEGQVGVLTSRGRPILELLDTRAMGSRLGLKPWSASRQASGREGGNGRG
ASLSVETLMDAVGKTHNLVSVSLAVDDPSETAQQCLAAGATAMEVEDGGV
EKGEVVLVPWGGGRGGGTEYHEEGREGREDRRRGDGGEEGTPKGGLILFL
RLGEAHVGGQDSGGRRERAETGGEVVRQDVRRKEGEGGEVQGGPQGVREA
TEAWVTEAKGRERGGREGGEGGAEGGGREGGGREGGEGGEEGTEFPTLSI
ELLERGGRDGGEGGARGGVRGEKRPTTAADSTRSEEEEEEEEGTEFPTLS
IELLRCSRPRGLRANTRHPLPIETGTFRGAFLLLLRDDDADPPEPRHHRH
MFHGKQRRFCIQVQGRFKVG
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mRNA from alignment at CM002461.1:256132..257527-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3376 ID=rna3376|Name=rna3376|organism=Nannochloropsis gaditana|type=mRNA|length=1396bp|location=Sequence derived from alignment at CM002461.1:256132..257527- (Nannochloropsis gaditana)
ACAGCGCAGCCCATGCCTCTACTCGAAAGAAAGTGAACAAAAAAAGTGGG
AAAAAAACCCTTCTGCAGCATATTTATTCCCCCGTCCCCGACATCAACGA
GCGTCATCGCAACTCCTTGGCCGCCCCCCCGAGGAATGGACACTCAACCA
CCTCCGACAACCACTTCGATCGTCCCTGGAGCGACCTTGATCGTGGAAGA
TGCCTGTGACTTTTTCGACCTCTCCGATTTCCTGTTTCGTGCCCGTCTGG
CCCCTGGGAAGTTGGCGCTGGCCGTGACAGGGACGAAGGAGGAAGGGCAG
GTTGGCGTTTTGACTTCACGGGGACGGCCTATCCTGGAACTCCTCGATAC
GCGGGCCATGGGGTCCCGGCTAGGGCTCAAGCCTTGGAGTGCGTCTCGCC
AGGCATCGGGGCGAGAAGGCGGCAATGGACGAGGGGCGTCTCTATCCGTG
GAGACCCTCATGGATGCAGTCGGGAAGACCCACAATCTGGTGTCGGTCTC
GTTGGCCGTGGACGATCCCTCTGAAACAGCCCAGCAATGCCTTGCTGCGG
GGGCCACAGCCATGGAGGTGGAAGATGGCGGGGTAGAAAAGGGCGAAGTG
GTGCTGGTGCCATGGGGGGGCGGCCGAGGAGGAGGGACGGAGTACCATGA
GGAAGGAAGGGAAGGAAGGGAAGACAGAAGACGTGGGGATGGCGGCGAGG
AGGGTACGCCAAAGGGCGGCTTAATCCTCTTCCTGAGGCTCGGCGAGGCG
CATGTCGGTGGCCAGGACAGTGGCGGGAGGAGGGAACGGGCAGAGACCGG
TGGGGAGGTCGTGCGGCAAGACGTGAGGAGGAAGGAAGGGGAGGGAGGGG
AGGTGCAAGGCGGCCCGCAAGGTGTTCGAGAAGCGACTGAGGCGTGGGTA
ACCGAGGCGAAGGGCCGGGAAAGAGGAGGAAGGGAGGGAGGGGAGGGAGG
GGCAGAGGGGGGGGGGCGGGAAGGAGGAGGAAGGGAGGGAGGGGAGGGAG
GGGAGGAAGGAACTGAGTTCCCCACCTTGAGCATCGAACTCCTCGAAAGA
GGAGGAAGGGATGGAGGGGAGGGAGGGGCGAGAGGGGGGGTACGGGGCGA
AAAAAGGCCGACGACCGCGGCCGACAGCACACGAAGCGAGGAGGAAGAGG
AAGAGGAGGAAGGAACTGAGTTCCCCACCTTAAGCATCGAACTCCTCCGT
TGCTCCCGGCCCCGGGGCCTCCGCGCCAATACCCGCCACCCGCTCCCTAT
CGAGACCGGCACCTTCCGGGGGGCTTTCCTCCTGCTCCTGCGCGATGACG
ACGCGGATCCGCCCGAACCGCGCCACCACCGCCACATGTTCCACGGCAAG
CAACGTCGGTTTTGCATTCAAGTCCAAGGTCGATTTAAGGTAGGAG
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Coding sequence (CDS) from alignment at CM002461.1:256132..257527-

>rna3376 ID=rna3376|Name=rna3376|organism=Nannochloropsis gaditana|type=CDS|length=1261bp|location=Sequence derived from alignment at CM002461.1:256132..257527- (Nannochloropsis gaditana)
ATGGACACTCAACCACCTCCGACAACCACTTCGATCGTCCCTGGAGCGAC
CTTGATCGTGGAAGATGCCTGTGACTTTTTCGACCTCTCCGATTTCCTGT
TTCGTGCCCGTCTGGCCCCTGGGAAGTTGGCGCTGGCCGTGACAGGGACG
AAGGAGGAAGGGCAGGTTGGCGTTTTGACTTCACGGGGACGGCCTATCCT
GGAACTCCTCGATACGCGGGCCATGGGGTCCCGGCTAGGGCTCAAGCCTT
GGAGTGCGTCTCGCCAGGCATCGGGGCGAGAAGGCGGCAATGGACGAGGG
GCGTCTCTATCCGTGGAGACCCTCATGGATGCAGTCGGGAAGACCCACAA
TCTGGTGTCGGTCTCGTTGGCCGTGGACGATCCCTCTGAAACAGCCCAGC
AATGCCTTGCTGCGGGGGCCACAGCCATGGAGGTGGAAGATGGCGGGGTA
GAAAAGGGCGAAGTGGTGCTGGTGCCATGGGGGGGCGGCCGAGGAGGAGG
GACGGAGTACCATGAGGAAGGAAGGGAAGGAAGGGAAGACAGAAGACGTG
GGGATGGCGGCGAGGAGGGTACGCCAAAGGGCGGCTTAATCCTCTTCCTG
AGGCTCGGCGAGGCGCATGTCGGTGGCCAGGACAGTGGCGGGAGGAGGGA
ACGGGCAGAGACCGGTGGGGAGGTCGTGCGGCAAGACGTGAGGAGGAAGG
AAGGGGAGGGAGGGGAGGTGCAAGGCGGCCCGCAAGGTGTTCGAGAAGCG
ACTGAGGCGTGGGTAACCGAGGCGAAGGGCCGGGAAAGAGGAGGAAGGGA
GGGAGGGGAGGGAGGGGCAGAGGGGGGGGGGCGGGAAGGAGGAGGAAGGG
AGGGAGGGGAGGGAGGGGAGGAAGGAACTGAGTTCCCCACCTTGAGCATC
GAACTCCTCGAAAGAGGAGGAAGGGATGGAGGGGAGGGAGGGGCGAGAGG
GGGGGTACGGGGCGAAAAAAGGCCGACGACCGCGGCCGACAGCACACGAA
GCGAGGAGGAAGAGGAAGAGGAGGAAGGAACTGAGTTCCCCACCTTAAGC
ATCGAACTCCTCCGTTGCTCCCGGCCCCGGGGCCTCCGCGCCAATACCCG
CCACCCGCTCCCTATCGAGACCGGCACCTTCCGGGGGGCTTTCCTCCTGC
TCCTGCGCGATGACGACGCGGATCCGCCCGAACCGCGCCACCACCGCCAC
ATGTTCCACGGCAAGCAACGTCGGTTTTGCATTCAAGTCCAAGGTCGATT
TAAGGTAGGAG
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Synonyms
Publications