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Properties
| Property Name | Value |
|---|
| Product | FAD dependent oxidoreductase |
| Orig transcript id | gnl|cribi|Naga_100192g10.10347.mrna |
| Orig protein id | gnl|cribi|Naga_100192g10.10347 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:202830..204666 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3356 ID=rna3356|Name=rna3356|organism=Nannochloropsis gaditana|type=mRNA|length=2152bp
CTTTATTTTCTCCCTCCGTCAACAGAGCTAGCGCAACGACCACTTTCAAG
TCACTATGTATGGCCCTGTCCCCGCCCCCTCCCATGCCGAACAAAGCAGA
TCTGAGGACTCGAACAAAGTCATGAAGTTCAAACGCCAGCAGGCCTTGAC
ACCCACGCCGCAATCCCCGTTCACTGACTTCCGCCATCGGGGAAACGAGG
AGGAGGAGGAGGAGGAGGAGGAGATCGTTACATTTCGTATTGACGGACAA
CACGTTCCAGCGAGTAACACAACAAGCACGCCGGGGGAAAACGAGCTGCA
CAAATTAAAGGATGCAGACGACATATCGCGCGCAGAGACGTACCAGCGAG
TACCTCTGACATGCACACAGGCTCCGGCACAGTCCTCGGTCCCTATTCCC
ACCACCGACGCTGTCGCGTTCGGGGGCCATCCCTCTTACTCCTGCGCGAA
AAAGCCTCAAGAAAAGGCCATGCACAATATGGAAGCGGTCATGGAGGCAA
CTGCAGCCAAGAGTGTTGGCGAAACGAATCCTTTGGGCCCAGCGTCTCTC
CCCTCAGGTCCCTGCGCCCCCTTTGATGGCAGCGACATGAAAGACCACGA
TGGCTTGAGCCTGCCCAAGGAAACGGCAGGCATCGACAAGGACGTGAAGG
AGGACCAGGAGATGGACGAGCTGAATGGTCGCTTGTCGGAAGGACTGTCC
CTGAAATACGATTTCGGCGGAGAACATTGCCCCAAGTACTCTCAGAGAGA
AGTGGACTTATTGGTGGGCAAACGCGTGGAGGAAGCCAAGACTGCTTTGG
TGGCCGCTCAAGCCATGGCCCACACGGAAGAGATGGCAAGCTGGGAGGCC
AAGCTGAAAAAAGCCGAGGAGGACGGGCAACGTTGGAAAGCGCAGTGCCA
TGGCCTCGAGCACGACCTCTCCGCCGAATTGAAGAGCGTGGAAGGCGCGT
TCGCCGCCCGTTTGAAAGAGACTCAGGATGAAGTCGTGTCCAAGGAGATC
CAGCTGAGAGCGGTCACGGCCCAGCTGGCGGACATGCAGCAACGCATTGC
TGTGGCAGAGAGAGAGGGTGAGGAAAGTCGTCAGAAGCTGGAAGAAGCAG
GGCGGAAAGAAGCGCGGCTCGTGCGCGAGATGGCCGAGAAATTGGAAGCA
GAGAAAGCTCGACGGGTCAAAGATGTGATGGACATGAAGGACCGGGTGGC
CCAACGGGCCCAGGAGCAGTTCGCGGTTGCTCAGGAGCACTTTAATCAAT
TAGCCAGCACCTTGGAAGGGAAGGAGGCCGAAGTGTCCCAATACAAGGGG
GAGATGCGGCGCGCTCAGGAAGAAGCGGGGGAGGCATTGCGGCAAAAGGA
CGACGCCGTGGCGAAGGCAAGAGATTTGGAGGCGGAGGCGGCAGCTTTGA
GGGTCACGGCGGGCCGAATGGAGGAAGAGAAGGAGCGACAGGCGAGGTCG
GCAGAAGAGAAGATGAGAAAGCTGCGGACCGCACTGGAAAAAATGGAGGA
TGAAAAATCCATTGCCATCAAGGACAGGGAGCAAGCCTACGAGTCCTTGT
CACGCACAGCCGTCTCGCTGCAAGAGCACAAACGGAAAGCGGAGGAGTTT
GAAGAGAAGTACAATACTTTGTTTCCGAAGGCCATGGAGCATGCCAGCAT
GTGCGAGGAGCTTCTGGTCATGGTGGAATCTCTGAATCAAAAGCTAGAGA
GCCAGGAGGGGAAATGAGACAAGTCTTGCAGCTTGGTGCGTGGTACCCGA
GTGAAAAACAGGTCCGATGGCGTGGAAACCGGACTGGCTGAACTCGTGGA
CGCTTTGCGGTGTGTGGACGATTACGATTGGTGGCATGTATTTGAAAGAG
TTTCAAGAGAACGGTAAAGGCAAATAGAACTGTGGATTGACACAAAGAAC
ATATGGCGAAAATATGAATATTGTACGCTATTGCACGTTCGATTCGAAAT
GGAGATTTTGGGATCTAAAAGCTTGTTAAAGCTCTGCTTTCAAAGCTCTT
CTTTCCTTGTGGGGATTGCCAAAATTTGACGGATAGAGAAATGGAACTTT
TCGCTCGAAACACACATTTCTCGTTGAGCCTTTCAGGGAGGCAGGTATCC
TTACGACGGTCTTCTAAAAACAACGACTGGGAGTCCCATTACATATTATT
TC back to topprotein sequence of rna3356 >rna3356-protein ID=rna3356-protein|Name=rna3356|organism=Nannochloropsis gaditana|type=polypeptide|length=451bp
MSGFVSTLALRRPQRLLPVALSLIAFLDTFRPINTFATSYHMMAASSPAA
PAAYSGNENIVVVGGGIMGACTLYYLTQKGLKPVLIERSEIAAAASGKAG
GFLARSWHTGATAELYGLSFDMHAQLAKELGIESYRQIPTLQVQGGPRAG
QKKSKVKPSWLNGRADSAFMDDDTAQVTPKEFTEKIVAAAVANGAQVVKG
TVVGLAFGEGQDGTAPVASIRTVTGVQLEGQEEEPIPCSKVVVATGPWAP
VAGEWFGIPVPMEGIYSTSIVLPNCEAASIQEPYALFCGEDENGCHIEVY
PRPDGKIYMCGLGGSDYVGGSRLTPGGDCDRPEKILPKPHRVHAAMKSFS
AMSPSMAHGKEPMAAACMRPCSQDGLPILGKIPTATNAYLATALNQWGIL
GAPAAGLCMAELVAEGKAKSANIDAFSPARFFTSRTRRGKKMKGIEVGEQ
W back to topmRNA from alignment at CM002461.1:202830..204666+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3356 ID=rna3356|Name=rna3356|organism=Nannochloropsis gaditana|type=mRNA|length=1837bp|location=Sequence derived from alignment at CM002461.1:202830..204666+ (Nannochloropsis gaditana)
TCGCTCCATATACCCTTCATTCGCAGAAAACAGCGCATGTCGGGATTTGT
CTCCACTCTTGCCTTGCGACGACCACAAAGACTGCTTCCTGTTGCGCTGT
CTCTTATCGCGTTTCTGGATACTTTTCGCCCGATCAATACCTTTGCCACT
TCGTATCACATGATggcggcgtcctccccggcaGCACCTGCAGCATATTC
TGGAAATGAAAACATTGTAGTCGTTGGTGGAGGTATCATGGGTGCTTGTA
CCCTCTACTATCTGACGCAAAAAGGGTTGAAGCCGGTGCTGATAGAACGA
AGTGAGATAGCAGCAGCTGCTAGCGGAAAAGCTGGTGGTTTTCTCGCTCG
TTCGTGGCACACTGGGGCTACAGCAGAGCTTTATGGCCTAAGCTTCGACA
TGCACGCCCAACTTGCCAAGGAGCTGGGGATTGAAAGCTACCGACAGATT
CCGACTTTGCAGGTCCAAGGGGGACCACGGGCGGGACAAAAGAAATCCAA
GGTCAAGCCATCTTGGTTGAATGGGAGGGCGGATAGTGCTTTCATGGATG
ATGATACGGCTCAAGTCACCCCAAAGGAATTTACCGAGAAAATTGTCGCG
GCTGCCGTGGCCAACGGCGCGCAGGTCGTGAAAGGCACGGTAGTGGGCTT
GGCTTTTGGCGAGGGCCAGGATGGCACAGCACCTGTAGCCAGCATTCGCA
CGGTGACGGGGGTGCAATTAGAAGGTCAGGAAGAAGAACCGATACCGTGC
AGTAAAGTTGTGGTGGCCACTGGTCCTTGGGCGCCTGTGGCGGGAGAGTG
GTTCGGCATCCCTGTGCCCATGGAAGGTGAGTGTCGCAGGTGTTGGCTAC
GGGCACGGGGAGCTCTCGTGTGGGTCGCATCCGCCTCCTAAGTGCACGAT
CCGACTCGGCGTAAGATAGTTTTCCAAAGGGTGTGAGTTCCAGTGCGAAA
TGCAGTTATtctacctcttccatccGTGACATTATCCTCTGTATTTGACT
TGGCATTTCATGTGGCCTACTCCGCTACACAACAGGTATCTACAGCACAA
GCATTGTCCTTCCCAATTGCGAGGCTGCCTCTATCCAAGAACCCTACGCG
CTTTTttgcggggaagacgagaacGGGTGCCACATCGAAGTCTATCCCCG
ACCGGACGGCAAAATCTACATGTGCGGATTGGGGGGAAGCGACTACGTGG
GAGGTTCCCGTCTGACCCCCGGCGGAGACTGTGATCGGCCCGAAAAAATT
CTTCCGAAACCTCATCGGGTGCACGCGGCCATGAAGTCCTTTTCAGCCAT
GTCCCCCTCTATGGCGCATGGGAAAGAGCCGATGGCGGCAGCCTGCATGC
GACCCTGTAGTCAGGATGGCTTGCCCATCCTTGGCAAGATTCCTACGGCG
ACCAATGCCTACTTGGCCACGGCATTGAACCAGTGGGGAATACTTGGTAC
GTTTGGTCACTGCGCTTAAAACTGGGTCTACAGTCATCATGCTCCCGTAT
CAAGTTTTGCTTGGAGGGTCACTTGTCCGCTGATGTAGAATTTCCTGGAC
TTTTGCAGCGAGGCGCTGCGAGTCATTCACATACATGCTATGCCGATGTC
TTAAACATTTCTCACAAAACCACAGGTGCCCCTGCTGCAGGACTATGTAT
GGCTGAGCTGGTAGCTGAGGGTAAAGCAAAGAGTGCTAATATTGACGCTT
TCTCACCGGCTCGCTTTTTCACATCACGGACTcggcgggggaaaaagaTG
AAGGGCATAGAGGTTGGCGAGCAGTGGTGAAAAGAATGCGGTATTGcaag
aaatgaaagaagaCGTTGAAAGCACATGGTCCAAGTC back to topCoding sequence (CDS) from alignment at CM002461.1:202830..204666+ >rna3356 ID=rna3356|Name=rna3356|organism=Nannochloropsis gaditana|type=CDS|length=4068bp|location=Sequence derived from alignment at CM002461.1:202830..204666+ (Nannochloropsis gaditana)
ATGTCGGGATTTGTCTCCACTCTTGCCTTGCGACGACCACAAAGACTGCT
TCCTGTTGCGCTGTCTCTTATCGCGTTTCTGGATACTTTTCGCCCGATCA
ATACCTTTGCCACTTCGTATCACATGATggcggcgtcctccccggcaGCA
CCTGCAGCATATTCTGGAAATGAAAACATTGTAGTCGTTGGTGGAGGTAT
CATGGGTGCTTGTACCCTCTACTATCTGACGCAAAAAGGGTTGAAGCCGG
TGCTGATAGAACGAAGTGAGATAGCAGCAGCTGCTAGCGGAAAAGCTGGT
GGTTTTCTCGCTCGTTCGTGGCACACTGGGGCTACAGCAGAGCTTTATGG
CCTAAGCTTCGACATGCACGCCCAACTTGCCAAGGAGCTGGGGATTGAAA
GCTACCGACAGATTCCGACTTTGCAGGTCCAAGGGGGACCACGGGCGGGA
CAAAAGAAATCCAAGGTCAAGCCATCTTGGTTGAATGGGAGGGCGGATAG
TGCTTTCATGGATGATGATACGGCTCAAGTCACCCCAAAGGAATTTACCG
AGAAAATTGTCGCGGCTGCCGTGGCCAACGGCGCGCAGGTCGTGAAAGGC
ACGGTAGTGGGCTTGGCTTTTGGCGAGGGCCAGGATGGCACAGCACCTGT
AGCCAGCATTCGCACGGTGACGGGGGTGCAATTAGAAGGTCAGGAAGAAG
AACCGATACCGTGCAGTAAAGTTGTGGTGGCCACTGGTCCTTGGGCGCCT
GTGGCGGGAGAGTGGTTCGGCATCCCTGTGCCCATGGAAGGTATCTACAG
CACAAGCATTGTCCTTCCCAATTGCGAGGCTGCCTCTATCCAAGAACCCT
ACGCGCTTTTttgcggggaagacgagaacGGGTGCCACATCGAAGTCTAT
CCCCGACCGGACGGCAAAATCTACATGTGCGGATTGGGGGGAAGCGACTA
CGTGGGAGGTTCCCGTCTGACCCCCGGCGGAGACTGTGATCGGCCCGAAA
AAATTCTTCCGAAACCTCATCGGGTGCACGCGGCCATGAAGTCCTTTTCA
GCCATGTCCCCCTCTATGGCGCATGGGAAAGAGCCGATGGCGGCAGCCTG
CATGCGACCCTGTAGTCAGGATGGCTTGCCCATCCTTGGCAAGATTCCTA
CGGCGACCAATGCCTACTTGGCCACGGCATTGAACCAGTGGGGAATACTT
GGTGCCCCTGCTGCAGGACTATGTATGGCTGAGCTGGTAGCTGAGGGTAA
AGCAAAGAGTGCTAATATTGACGCTTTCTCACCGGCTCGCTTTTTCACAT
CACGGACTcggcgggggaaaaagaTGAAGGGCATAGAGGTTGGCGAGCAG
TGGTGAATGTCGGGATTTGTCTCCACTCTTGCCTTGCGACGACCACAAAG
ACTGCTTCCTGTTGCGCTGTCTCTTATCGCGTTTCTGGATACTTTTCGCC
CGATCAATACCTTTGCCACTTCGTATCACATGATggcggcgtcctccccg
gcaGCACCTGCAGCATATTCTGGAAATGAAAACATTGTAGTCGTTGGTGG
AGGTATCATGGGTGCTTGTACCCTCTACTATCTGACGCAAAAAGGGTTGA
AGCCGGTGCTGATAGAACGAAGTGAGATAGCAGCAGCTGCTAGCGGAAAA
GCTGGTGGTTTTCTCGCTCGTTCGTGGCACACTGGGGCTACAGCAGAGCT
TTATGGCCTAAGCTTCGACATGCACGCCCAACTTGCCAAGGAGCTGGGGA
TTGAAAGCTACCGACAGATTCCGACTTTGCAGGTCCAAGGGGGACCACGG
GCGGGACAAAAGAAATCCAAGGTCAAGCCATCTTGGTTGAATGGGAGGGC
GGATAGTGCTTTCATGGATGATGATACGGCTCAAGTCACCCCAAAGGAAT
TTACCGAGAAAATTGTCGCGGCTGCCGTGGCCAACGGCGCGCAGGTCGTG
AAAGGCACGGTAGTGGGCTTGGCTTTTGGCGAGGGCCAGGATGGCACAGC
ACCTGTAGCCAGCATTCGCACGGTGACGGGGGTGCAATTAGAAGGTCAGG
AAGAAGAACCGATACCGTGCAGTAAAGTTGTGGTGGCCACTGGTCCTTGG
GCGCCTGTGGCGGGAGAGTGGTTCGGCATCCCTGTGCCCATGGAAGGTAT
CTACAGCACAAGCATTGTCCTTCCCAATTGCGAGGCTGCCTCTATCCAAG
AACCCTACGCGCTTTTttgcggggaagacgagaacGGGTGCCACATCGAA
GTCTATCCCCGACCGGACGGCAAAATCTACATGTGCGGATTGGGGGGAAG
CGACTACGTGGGAGGTTCCCGTCTGACCCCCGGCGGAGACTGTGATCGGC
CCGAAAAAATTCTTCCGAAACCTCATCGGGTGCACGCGGCCATGAAGTCC
TTTTCAGCCATGTCCCCCTCTATGGCGCATGGGAAAGAGCCGATGGCGGC
AGCCTGCATGCGACCCTGTAGTCAGGATGGCTTGCCCATCCTTGGCAAGA
TTCCTACGGCGACCAATGCCTACTTGGCCACGGCATTGAACCAGTGGGGA
ATACTTGGTGCCCCTGCTGCAGGACTATGTATGGCTGAGCTGGTAGCTGA
GGGTAAAGCAAAGAGTGCTAATATTGACGCTTTCTCACCGGCTCGCTTTT
TCACATCACGGACTcggcgggggaaaaagaTGAAGGGCATAGAGGTTGGC
GAGCAGTGGTGAATGTCGGGATTTGTCTCCACTCTTGCCTTGCGACGACC
ACAAAGACTGCTTCCTGTTGCGCTGTCTCTTATCGCGTTTCTGGATACTT
TTCGCCCGATCAATACCTTTGCCACTTCGTATCACATGATggcggcgtcc
tccccggcaGCACCTGCAGCATATTCTGGAAATGAAAACATTGTAGTCGT
TGGTGGAGGTATCATGGGTGCTTGTACCCTCTACTATCTGACGCAAAAAG
GGTTGAAGCCGGTGCTGATAGAACGAAGTGAGATAGCAGCAGCTGCTAGC
GGAAAAGCTGGTGGTTTTCTCGCTCGTTCGTGGCACACTGGGGCTACAGC
AGAGCTTTATGGCCTAAGCTTCGACATGCACGCCCAACTTGCCAAGGAGC
TGGGGATTGAAAGCTACCGACAGATTCCGACTTTGCAGGTCCAAGGGGGA
CCACGGGCGGGACAAAAGAAATCCAAGGTCAAGCCATCTTGGTTGAATGG
GAGGGCGGATAGTGCTTTCATGGATGATGATACGGCTCAAGTCACCCCAA
AGGAATTTACCGAGAAAATTGTCGCGGCTGCCGTGGCCAACGGCGCGCAG
GTCGTGAAAGGCACGGTAGTGGGCTTGGCTTTTGGCGAGGGCCAGGATGG
CACAGCACCTGTAGCCAGCATTCGCACGGTGACGGGGGTGCAATTAGAAG
GTCAGGAAGAAGAACCGATACCGTGCAGTAAAGTTGTGGTGGCCACTGGT
CCTTGGGCGCCTGTGGCGGGAGAGTGGTTCGGCATCCCTGTGCCCATGGA
AGGTATCTACAGCACAAGCATTGTCCTTCCCAATTGCGAGGCTGCCTCTA
TCCAAGAACCCTACGCGCTTTTttgcggggaagacgagaacGGGTGCCAC
ATCGAAGTCTATCCCCGACCGGACGGCAAAATCTACATGTGCGGATTGGG
GGGAAGCGACTACGTGGGAGGTTCCCGTCTGACCCCCGGCGGAGACTGTG
ATCGGCCCGAAAAAATTCTTCCGAAACCTCATCGGGTGCACGCGGCCATG
AAGTCCTTTTCAGCCATGTCCCCCTCTATGGCGCATGGGAAAGAGCCGAT
GGCGGCAGCCTGCATGCGACCCTGTAGTCAGGATGGCTTGCCCATCCTTG
GCAAGATTCCTACGGCGACCAATGCCTACTTGGCCACGGCATTGAACCAG
TGGGGAATACTTGGTGCCCCTGCTGCAGGACTATGTATGGCTGAGCTGGT
AGCTGAGGGTAAAGCAAAGAGTGCTAATATTGACGCTTTCTCACCGGCTC
GCTTTTTCACATCACGGACTcggcgggggaaaaagaTGAAGGGCATAGAG
GTTGGCGAGCAGTGGTGA back to top
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