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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101360g1.5787.mrna |
| Orig protein id | gnl|cribi|Naga_101360g1.5787 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:148225..150929 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3335 ID=rna3335|Name=rna3335|organism=Nannochloropsis gaditana|type=mRNA|length=797bp
ATATACCCTTATATGTGCCCGATCTGCTTCCACTTCTTCCCGTCCATCTT
GGTTGCTGCCTCCTGCTGCGGACATTACGTCTGCTATGAGTGCTTGGTGG
GCTACGTCGCTACCCGATACGGCGTCTCTCCCGCCGACCTTCCCTTCCTG
GACGTACCCTTTCTCTTCCCTTTGCCCTGCCCCCTCTGTGCGTCCCTCGA
CTTTGCGCCCACTCCGGTCTCTCGCACGGCCAAAATTAGGTCCTATGAAG
ACGAAGCGAGGGAGGGGGAGGTGCCGGTGCTGGGGGGGGGGGAGGGAGGG
AAGCACGGAGGGGGGGAGGGAAGGGAGGTGGAAGCTGGCTCGAGCCCTGC
GCGATCCGCGGCGATGTTGTGAGGGAGGAGAACGTGGGGAGGGGAGGGAA
GGGAGGAGGGAGGGAGGGAGGGGAGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGGGGGCGGAGCCGGTGAAATGTTTTCTCATCGGCAGCTTGTGCATAA
AGGGGTAAAAGTGGAGGGAAGGGGCAAAAGTGAGAAGATCCGTCTCCAAC
CAAAAGATTTTTGTTCGACGTGAAGAGGCATCTGGAAAGATACCTCTTCA
ACGAGGGAAGATACCTCTTCAACATGTGAAAGCGTCCTGGCCAAGTCTCG
AAGAGTAACGGCGATCCGATCCGTTCTTTTCATGCTTTGCTTCTTTAAAC
ATTCGACTTTTGCATTGCGGGTATGATTGCTTCATCCTTTTGAATTCATA
TTTTGCTCTTTGCAAGGGGATACTTTGACGCCTGCAGATACACGAGG back to topprotein sequence of rna3335 >rna3335-protein ID=rna3335-protein|Name=rna3335|organism=Nannochloropsis gaditana|type=polypeptide|length=210bp
MSLACLRSCLFFGSPFLTCRAAGGKHEWDEEEEEAAEQEDEEERVEAGSD
QDIAYRYYDDCQQRQYRQALTSTTRSRSARASRAQAAASSSSSSSSSSSS
SSSSSSSSAFSSPLQSTHRPAAIVALSGWEGLFDDTEYSPLPSDALGSRH
HPQTRPPRPPRLTSPSPSPSPSIPTSPHPCLPLPRTPLHHRPHRLYPGGG
GMSDLHPTAW back to topmRNA from alignment at CM002461.1:148225..150929- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3335 ID=rna3335|Name=rna3335|organism=Nannochloropsis gaditana|type=mRNA|length=2705bp|location=Sequence derived from alignment at CM002461.1:148225..150929- (Nannochloropsis gaditana)
GGCGAGAGAGAACACGATGGCCGAGGGCGGACTGGAAGGGGCTTGCGCTA
CCTCCCTAGCCACAAGAGGGGGCACGCTGACAGATAAAGAGGAGAGGGCC
GGGACGAGAAATACCCTTTCACTCACTCAGCCTTCAGAGGGGAGGGAGGC
AGGGGCCGGGACGAGAAACACCCCTCCATTCACTCAGCCTTCAGAGGGGA
GGGAGGCAGGGGCCGGGACGAGAAACACCCTTCCAGTCACTCTCTCTCTC
TCTTCAGAGGGGAGGGAGGCAGGGGCCGGGACGAGAAACACCCCTTCGCC
CACTCAGCCTTCGCCACCCTCCTCGCCAAGGGGACGGCCCTGCTGCACCA
CGCGATCGGCGTCGGCTGCTACCAAGCGGTCTTTCCCCTCCTGTCCTCCC
TCCTCCTCGCCCTTCTCCCTGGCCTCCACCTTAACCCGCGCTTAAGAATC
CTCCGCCCTCCTCCCCCTCACTCAGGCCCTCTCCCTCTACGCGCAGCTCC
CTGCCGAGGAAGGGCGGCTTGCGGCAGTTCACTCCCAGGTGGGCTCATTC
TATGCCCGACCTGGACGGGGCAACGGGAAAAAAAAGGCGCGAGATTTCAT
GGGCCGAGCGCTCTTTCAGTACAACCAAGCGTTTGGCTTCTACAAGCGGA
TGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGGGTCCACGA
TGTGGTCGATTGTGATAGAGCTGGCAGCTTTCTTGGAGGTGGTCGGTTGT
GCAGAAGGTGCACGGGTGGGGGAGGGAGGAGGGGGAGGGGGAGAGAAAGG
AAGAAGGAGGGGAGGGAGGGGAAGGGAGGGTCTGTCTTTGGCAAGCGCTG
GAGTGTCTATTGAAGGGGCGATGTGTCGTTGAGGATGAGGAGGGACAGAC
AGACAATGAGAAAGAGGAAGGAGGAGTGCCGTCCTTTCCCTCTCAAGATG
ACAGGGAGGAGCTACAAGCACGATTACAGAGGATTTTGATGGCGCTCTTA
AGAAAGAGTGGGGGAACGTGCGGGGAGGAGGAGAGGAGGTTAAAAGGGAT
GTACAGACTCGTCCTGGAAGGACAGAAAGGCCAGCTTCGATGGGGCAGGA
AGGCGATGGACGGCTTGTGGACGCTGTATGTTGGTGAATCGTAGGCTTAG
ATATGAGCGTGGAAAATGAGTCAATCTGTTTGTCTTTGTGGGCCCTCGCC
TGTCCGTAAAGGCGACGCCGTGTGATCCAATGCATGCCGCAGACTAAAGG
GAATCCACTTTCAAGAAGTGATGACAGGAATCAACATTGAAACCTTAATC
TGCCCAGTGGTATACACAATATTTTAGACCTGATAACGCAGCGAGGGAGA
CAACGCAGAGACGCTCTGACTTCGTTTGTCTGTGGCTCGTGCTGAGAGGC
CATACTCAGGGAGCAGCATGTCATTGTGCCCTACACCATCTGCCTCATCT
TAGCCTCTGGTTGCTTCCTTTCTTCCATGTGGATGTGACCACATCTTCTA
TGTCATGAACAGGGAAAGGCCCCTGATGCGTGTTTCAAATGCGCGTCGTC
TTTGGCGTGATATCAGAAAGGGGTGGGGAGGTCTTTGTGACAAGAGTAAA
AAAGGAGGGTCCTAGTGGACGGAAGACGGGGAACTAAGAGCAGAGTGCCA
GCAAAGAAATGCGTAAAGCAATCTATGATACGGCTGAGGAAAGTGTTGAA
TCAGTAGGGCTACGTGTATGTTCGTGGCTGGTTTGGGGGGTTATTTTTCC
TTCGTCCTCAAGTCGCCCTGACACGTGAGCGGCAACGCCACGCCGACGCG
GCTATTCGAGCGTTGTGACCAGAGCACAATGATACCATGACTCCACCGCC
ACTGTACTTCCCTTCTTTGACTACTTTACTACGTATTTTCTACCCGCAGC
AAGCGCCGTTTCATTTTCATACCTGCCTGGTTTGTGTTCTTCTTGCAATG
CAACTTGAAGGCTTGAAGTATCCTGTAGAAAGCAAAAAAGCTCCTTGGGC
GGTATCCGTTTCTTTCTCAATCATCATGCTGGCAATTTTTCGAATTAAAA
TCCCACAGGACAATTCAGAGAAGTGATGTCCTTGGCGTGCTTGCGCAGTT
GCCTTTTCTTTGGGAGCCCTTTTCTGACATGCAGGGCGGCGGGCGGGAAG
CACGAGTGGGATGAAGAGGAGGAGGAAGCTGCAGAGCAAGAAGATGAAGA
GGAGCGAGTGGAAGCAGGAAGCGACCAGGACATTGCCTACCGCTACTACG
ACGACTGTCAGCAACGCCAGTACCGTCAAGCCTTGACAAGCACCACCCGC
AGTCGTTCTGCTCGGGCATCACGAGCGCAAGCAGCAGCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCG
CTTTTTCCTCTCCCCTCCAATCCACTCATCGACCCGCCGCCATCGTTGCC
CTAAGCGGCTGGGAAGGCCTGTTCGACGACACTGAATATTCTCCTCTGCC
CTCTGACGCACTTGGCTCGCGGCACCATCCTCAAACACGTCCTCCCCGCC
CCCCCCGCCTCACCTCCCCCTCCCCCTCCCCCTCCCCCTCCATCCCCACC
TCCCCCCATCCCTGCCTCCCGCTTCCTCGCACTCCCCTCCATCACCGTCC
TCATCGTTTGTATCCGGGGGGGGGGGGCATGTCTGACCTCCACCCCACGG
CATGG back to topCoding sequence (CDS) from alignment at CM002461.1:148225..150929- >rna3335 ID=rna3335|Name=rna3335|organism=Nannochloropsis gaditana|type=CDS|length=630bp|location=Sequence derived from alignment at CM002461.1:148225..150929- (Nannochloropsis gaditana)
ATGTCCTTGGCGTGCTTGCGCAGTTGCCTTTTCTTTGGGAGCCCTTTTCT
GACATGCAGGGCGGCGGGCGGGAAGCACGAGTGGGATGAAGAGGAGGAGG
AAGCTGCAGAGCAAGAAGATGAAGAGGAGCGAGTGGAAGCAGGAAGCGAC
CAGGACATTGCCTACCGCTACTACGACGACTGTCAGCAACGCCAGTACCG
TCAAGCCTTGACAAGCACCACCCGCAGTCGTTCTGCTCGGGCATCACGAG
CGCAAGCAGCAGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCC
TCCTCCTCCTCCTCCTCCTCCTCCGCTTTTTCCTCTCCCCTCCAATCCAC
TCATCGACCCGCCGCCATCGTTGCCCTAAGCGGCTGGGAAGGCCTGTTCG
ACGACACTGAATATTCTCCTCTGCCCTCTGACGCACTTGGCTCGCGGCAC
CATCCTCAAACACGTCCTCCCCGCCCCCCCCGCCTCACCTCCCCCTCCCC
CTCCCCCTCCCCCTCCATCCCCACCTCCCCCCATCCCTGCCTCCCGCTTC
CTCGCACTCCCCTCCATCACCGTCCTCATCGTTTGTATCCGGGGGGGGGG
GGCATGTCTGACCTCCACCCCACGGCATGG back to top
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