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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100185g4.8948.mrna |
| Orig protein id | gnl|cribi|Naga_100185g4.8948 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:24106..26567 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3292 ID=rna3292|Name=rna3292|organism=Nannochloropsis gaditana|type=mRNA|length=2474bp
AGGTATAAACATTCAGAGTAGCAGAGATGTATATCATCTTGGAGTACAAT
GGCACCAACAGCGTCAAAAATCAAACGTAGGTCCATCCGCGTGCATGCCT
CGGCCAGTATGGCATCTATGTACGTCAAAACCCGATGACGACCGCTCGCG
GGCGTTCTCGCAAAATGCCAACACTTCTACGCTCCCTTTGGCTCTAGTAC
GGACAAAACGACAGACATTGTAGCAGGGAGTATACGGAGTCACAAAGATA
TTTTATTGCAACCACATAAGTCAAGCTTGCGTATCAGAGATGCTGCAATG
ACTCAATGTGACAGACAATTGTGGGCAATGAGAAGGAGCAACCCTTCAAG
CAAGTAAGAAGCTAATTGCCTTCACCCGTCCTCCAACACCTAAGACAGAG
ACCCTGTACAGCACATAACGCAACTCATGCAAATTCTAGATGCTCTTTCC
AGTGCATGTGGTCCACGAAGTCAGCAAGAGGCTCTGGTTCTCGCGTGCCA
TGCTGCATTCTTGCTGCATGGAACTCCCCGCCTAGTACCCTTGTCGTCCA
CTTCGCGCTCTGCTCCATTGTCTTTCTCTTTACTGGATGCCTTTCATGAA
GCCTCTGCAGGCTACTTCCCGACACAGTATTTCGCCGTATGCAAGGAAGG
TACCAAGGACAGCGATAATCAAGACATGGATTACATTTCCATTAAGCCGA
TAAGGTGCAGGGGGAGGAGCCACGATCACGGAGGGAGCGAGGGATCAGAC
TCGCGGCATCTACAAACTGGTCCCGTGCTTGTCCTTTTCGGTTATCGGGG
GAAGCTGCATGGGTCCGCTGTGCACAGGTTGGAGCTGTCGGTGGGAGAGT
ACATCGTTCAAGAGCCCGACTTCCTCCGTATCACTGAGCGGGAGGCTTCA
GGAAGACCCTTAGAGAAAATTGGGACAGGGGATAAAAATTACATGAACAC
AAGTGAGAACATTTGTCTCATAACAGGTGAACAGGGCAACAGTGACGGTG
CAAGCGCCCCTAAGTATGCCTGTCGCTTCCAGGCTTTAGTCTCGCATATC
GCTGTTCGATTTTTCTCCAAGTTGGTTCCTGAACTTTACACCGTAAGATC
GCTCCCTGCCTTCACAGAAGTCATTGGAAGACGCGGTGGGCGCGGTAATG
GGTGCCTTACACAAATGTGTTCATCGTCGACTCCCTCATTGCTGGTGGAT
GAGCTCCTTCCTTTCCTCGACTGCCAGAGTATGCTCCATCTCGCGGCAAC
GGCATGGCAGTTTCACCGGCCTTTGACGCTGACACAGCAAGCATGGATCA
TTCTCCTGGAACGAGACTTCCCTCTTGCCGATTCCTCTTCCTTTTTGCGT
CCTGCCACTTCCCGCTCCTCCGAAGCAGGACCGCATCTGTCTGCAAAAAG
TGCGCGCGACGCCTATCGTCGCCAGTTTCAGGCCCGATTTCCACCCAAGA
TGCTTCGACACGAGGGTCTGCAGGAGCATTGGGTTGGCCATCGGTGGTAT
TTACCACCTTTTCCAGGCGAGTTCCATACCGCCCCCATTTTTTCTCCCGT
CCGTTATTTTTCGGAGGACTTCGAGGAAGTGAGAAGAGGAAGGAGGGAAG
CGTTACGGTATCCATTCGAAGAGTCGCCGCTAACGTGGCTTGAGAGGAGG
CCAGAACGAAGGGAAGAAGGCCTTTTTGAAGGGAACTTTTGTTGGAGATG
AAGAAAGAGGGAAATGACATAGTGAAAGCAAAAGAAAGTTCTTCAAGATA
GGCAAGGTAGAAAAACACTAGGGTGTACCGTGTATATAATCATATGCAAT
AAAAGTATGCAGCTAAGAATAGCAAGATAGAATCTGAGTAAAAACTTGGG
AGCGCCTTGGCGTGATTTCTCTTTGGCTTGCGCAATATGCGTTATATTAT
ACAACAGTCGTTAAAAACATCGAATTCTTGTTTCCGTGGTGGTGAGAAGA
ATGCCGCTTAGTCAGCGGTATTGGAAGCATAATCTTGCTTCCTAAGCCCA
CCCAGCAGAGGCTGAGAGCTACGACAAGCACCACAGACGTCTCAGCGCTG
GAGAAATTATGTCATAAAGGAATGCGTGATAATCTTTTTTCCAAAATACG
TGTGGTTGTTCGTGTGAAGTTATCTAAGTATAAAGTACGACCAAACATAC
GTCATGTGACTTATTTAACTGATCAGTGCAGCTTTAAGTGAGCGCAATTC
AAGAAATGTAGTAGACCCGTGAATATTCATGCAAACTAATTCCCTCTTAC
CGGAGGATGGTGACGAGACTTGGGTCATCAATGCCCGCTCCTTCCCAGTG
GACGAAGCGATATACTGTATGCTCCGCAAAAAGGGTTTTCAGCAATGGAT
CAGAATTCGGATTCTGTTCCAGGTCGTGAGCGAGTTGGAAGGGAAAATGG
TAGAGAACTAGAAAAGGGATCGAGATGCTGTACAAGGTAATATAGGGACA
GAATTGAGTTTAGATCGCTTAATG back to topprotein sequence of rna3292 >rna3292-protein ID=rna3292-protein|Name=rna3292|organism=Nannochloropsis gaditana|type=polypeptide|length=582bp
MRPHSTHQYATRSALSTGNGRFTLILRSIVFLFFLSAYLLGNLWMTLPMV
PREMGRETSADARPRYSVLRHGNHGSAAWSLRNRNMEETSAHVQSFEAAS
SDLKAPDGTENEALGRYIERSGNVVGIEAADTEMNALLAREKSGVIKIQD
QDEEGENLEELEENAVEDFGPIEEDGERSLSSSSSSSTSAPTSTSPSSIW
PPPSWAWPLDPDHEAYGRDMFKIRFPPSAAASNATCTGAGSLDEDLDFTL
VSQSSPDRIWMLPHICERWEGPIIVAIFMHGFTAEHDAFMANLKCPQLQC
LPVHPSVPASSSIPASVWAAPNLYPVNALRNLAISEVRTTHFLLTDMDLW
PSRRLYPLLKHLSSKREIDSKGTRETFLDPLQALVVPAFSYLGQVTGGEK
QEAREDKVGGMPDDQRGLVECLWKGNCLVFDAQYNVHGHGTTDTAYWVGR
QENEEIKPIPCFLSNRYEPYVVLRRCPTTPPFAEAFTGYGKNKIQHIAHL
RFRGFTFSVLPPEAFLVHYPHPKSRSKQSWLEGGKQEASRGWRGRMDDLY
SRFLDWAFNERAARAGSITHLCQPPESTALKA back to topmRNA from alignment at CM002461.1:24106..26567- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3292 ID=rna3292|Name=rna3292|organism=Nannochloropsis gaditana|type=mRNA|length=2462bp|location=Sequence derived from alignment at CM002461.1:24106..26567- (Nannochloropsis gaditana)
CAGCAATTCTTCAGAATCATCATATCAACCGCCTTGTTTCAAAATTACAT
AAAACAGAACAGCGACGACTTTCCTATCAAAGTAAACATTACTGTCGGTG
GAAAGGCACACCTTTTGAACATGTCATAGCGAAGCAGTCGAAGCCAGTTT
TACGTCCGTCTCGAGATCGATCATGCGTCCACACTCTACCCATCAGTATG
CCACCCGGAGTGCCTTGAGCACAGGGAATGGTAGATTTACCCTCATTTTG
CGGTCCATTGTTTTCCTTTTTTTCCTATCTGCATATCTATTGGGAAATTT
GTGGATGACATTACCCATGGTCCCTCGAGAAATGGGAAGAGAAACAAGTG
CTGACGCGAGACCTCGATACAGCGTGCTACGACACGGCAATCACGGTTCT
GCTGCTTGGTCGCTAAGAAATCGTAACATGGAGGAAACTTCTGCGCATGT
GCAGTCCTTTGAGGCCGCTAGCTCAGACTTGAAAGCGCCCGACGGGACTG
AAAACGAGGCGTTGGGCAGGTACATTGAACGATCCGGTAATGTGGTAGGA
ATAGAAGCAGCAGACACAGAAATGAATGCTTTGCTCGCAAGAGAGAAAAG
TGGTGTAATCAAAATTCAAGACCAAGATGAAGAAGGTGAAAATCTGGAAG
AGCTGGAGGAAAATGCGGTTGAAGACTTTGGGCCAATCGAAGAGGATGGA
GAGAGGAGCCTTTCCTCCTCCTCTTCTTCCTCCACCTCCGCCCCTACCTC
AACCTCGCCTTCCTCCATCTGGCCCCCTCCATCATGGGCGTGGCCCCTCG
ACCCCGACCATGAAGCCTATGGGAGAGACATGTTCAAGATTCGCTTTCCC
CCTTCCGCCGCCGCCTCCAATGCAACTTGCACGGGCGCTGGCAGCCTCGA
TGAGGACTTGGACTTCACCCTTGTCTCCCAAAGCTCGCCTGACAGAATCT
GGATGCTCCCTCATATCTGTGAGCGGTGGGAAGGGCCCATAATCGTCGCC
ATCTTCATGCACGGCTTCACCGCCGAGCACGACGCCTTCATGGCAAACCT
GAAGTGCCCCCAGCTGCAATGTCTCCCAGTGCACCCCTCTGTCCCTGCCT
CCAGCTCCATTCCCGCCTCAGTATGGGCCGCACCAAACCTATATCCTGTC
AATGCCTTGCGAAATCTCGCGATCTCGGAAGTGAGAACGACGCACTTCCT
TCTCACGGACATGGACCTGTGGCCTTCCCGCCGTCTCTACCCTCTCCTGA
AGCACCTGTCGTCGAAGAGGGAGATAGACAGTAAGGGCACGCGCGAGACG
TTTCTGGACCCGCTTCAGGCGCTAGTGGTGCCTGCTTTTAGTTATCTTGG
ACAAGTAACTGGAGGCGAGAAGCAGGAGGCCAGGGAGGACAAGGTGGGAG
GGATGCCGGACGACCAGAGGGGCCTGGTGGAATGCTTGTGGAAGGGAAAC
TGCCTTGTGTTTGATGCTCAGTACAACGTGCACGGCCACGGCACCACGGA
CACGGCCTACTGGGTGGGCCGGCAGGAGAACGAAGAGATCAAGCCCATCC
CTTGCTTTCTATCCAACAGGTCCGGTAGAGGGACGGAAATGTGGAAGCAG
GTGGCCAGAAAGCCAACCCGTCTCTGACATGCAACGTCAAAAACACAGTA
GCTCCCTCATCAGACCTTCTTTCTGAACTCCTCTTCCCTTCATTTTTCCT
CCCGTAGATACGAGCCCTACGTGGTCCTTCGGCGCTGTCCTACCACGCCT
CCTTTCGCCGAAGCCTTCACAGGATATGGAAAGAACAAGATACAACACAT
TGCCCATTTACGCTTCCGCGGATTTACCTTCTCGGTGCTTCCACCCGAGG
CATTCTTGGTACACTACCCTCACCCGAAGAGTAGAAGCAAGCAGTCGTGG
CTGGAGGGTGGGAAGCAGGAGGCGAGCAGAGGCTGGAGGGGAAGGATGGA
TGACCTTTATAGCCGATTTTTGGACTGGGCTTTTAACGAAAGGGCGGCCA
GAGCAGGGTCAATCACGCATTTGTGCCAGCCTCCTGAGTCAACTGCCCTG
AAAGCGTGAGGACTGGAGGTGTTTGTAGAAGCATCTACCGGTGAGGGCAT
CGCGTTGCTTCACCTTGCTTGCATGGAATTTTGGACATGTCAATGGCAGC
ATTTGCATGCATGGAATCGAACTTGTCATATTAAAATCATTCAAAATAAA
ATTATGAGGGGGTAGATGAGAGAATATAGAAAGCAGACTACCACTCGATG
GGAAATGATAGAGAGGGAGAATAAAAGAAGCTTTTCCCCTACAATGATTA
TCGAGGTGCGTGTGCATGAAGATTTAGGGGTCAATAAATGTAGGTAGACT
ACTGGATCTCGTGAACCGCATAAACACCTGTCTGTGAGCAGTGTGAAAAA
GCTCCTTATTCTTCGCGGTCAGAAAGACTCGCGATAAAGAAAATTTTTAT
GGACATCAAGCA back to topCoding sequence (CDS) from alignment at CM002461.1:24106..26567- >rna3292 ID=rna3292|Name=rna3292|organism=Nannochloropsis gaditana|type=CDS|length=3498bp|location=Sequence derived from alignment at CM002461.1:24106..26567- (Nannochloropsis gaditana)
ATACGAGCCCTACGTGGTCCTTCGGCGCTGTCCTACCACGCCTCCTTTCG
CCGAAGCCTTCACAGGATATGGAAAGAACAAGATACAACACATTGCCCAT
TTACGCTTCCGCGGATTTACCTTCTCGGTGCTTCCACCCGAGGCATTCTT
GGTACACTACCCTCACCCGAAGAGTAGAAGCAAGCAGTCGTGGCTGGAGG
GTGGGAAGCAGGAGGCGAGCAGAGGCTGGAGGGGAAGGATGGATGACCTT
TATAGCCGATTTTTGGACTGGGCTTTTAACGAAAGGGCGGCCAGAGCAGG
GTCAATCACGCATTTGTGCCAGCCTCCTGAGTCAACTGCCCTGAAAGCGT
GAATGCGTCCACACTCTACCCATCAGTATGCCACCCGGAGTGCCTTGAGC
ACAGGGAATGGTAGATTTACCCTCATTTTGCGGTCCATTGTTTTCCTTTT
TTTCCTATCTGCATATCTATTGGGAAATTTGTGGATGACATTACCCATGG
TCCCTCGAGAAATGGGAAGAGAAACAAGTGCTGACGCGAGACCTCGATAC
AGCGTGCTACGACACGGCAATCACGGTTCTGCTGCTTGGTCGCTAAGAAA
TCGTAACATGGAGGAAACTTCTGCGCATGTGCAGTCCTTTGAGGCCGCTA
GCTCAGACTTGAAAGCGCCCGACGGGACTGAAAACGAGGCGTTGGGCAGG
TACATTGAACGATCCGGTAATGTGGTAGGAATAGAAGCAGCAGACACAGA
AATGAATGCTTTGCTCGCAAGAGAGAAAAGTGGTGTAATCAAAATTCAAG
ACCAAGATGAAGAAGGTGAAAATCTGGAAGAGCTGGAGGAAAATGCGGTT
GAAGACTTTGGGCCAATCGAAGAGGATGGAGAGAGGAGCCTTTCCTCCTC
CTCTTCTTCCTCCACCTCCGCCCCTACCTCAACCTCGCCTTCCTCCATCT
GGCCCCCTCCATCATGGGCGTGGCCCCTCGACCCCGACCATGAAGCCTAT
GGGAGAGACATGTTCAAGATTCGCTTTCCCCCTTCCGCCGCCGCCTCCAA
TGCAACTTGCACGGGCGCTGGCAGCCTCGATGAGGACTTGGACTTCACCC
TTGTCTCCCAAAGCTCGCCTGACAGAATCTGGATGCTCCCTCATATCTGT
GAGCGGTGGGAAGGGCCCATAATCGTCGCCATCTTCATGCACGGCTTCAC
CGCCGAGCACGACGCCTTCATGGCAAACCTGAAGTGCCCCCAGCTGCAAT
GTCTCCCAGTGCACCCCTCTGTCCCTGCCTCCAGCTCCATTCCCGCCTCA
GTATGGGCCGCACCAAACCTATATCCTGTCAATGCCTTGCGAAATCTCGC
GATCTCGGAAGTGAGAACGACGCACTTCCTTCTCACGGACATGGACCTGT
GGCCTTCCCGCCGTCTCTACCCTCTCCTGAAGCACCTGTCGTCGAAGAGG
GAGATAGACAGTAAGGGCACGCGCGAGACGTTTCTGGACCCGCTTCAGGC
GCTAGTGGTGCCTGCTTTTAGTTATCTTGGACAAGTAACTGGAGGCGAGA
AGCAGGAGGCCAGGGAGGACAAGGTGGGAGGGATGCCGGACGACCAGAGG
GGCCTGGTGGAATGCTTGTGGAAGGGAAACTGCCTTGTGTTTGATGCTCA
GTACAACGTGCACGGCCACGGCACCACGGACACGGCCTACTGGGTGGGCC
GGCAGGAGAACGAAGAGATCAAGCCCATCCCTTGCTTTCTATCCAACAGA
TACGAGCCCTACGTGGTCCTTCGGCGCTGTCCTACCACGCCTCCTTTCGC
CGAAGCCTTCACAGGATATGGAAAGAACAAGATACAACACATTGCCCATT
TACGCTTCCGCGGATTTACCTTCTCGGTGCTTCCACCCGAGGCATTCTTG
GTACACTACCCTCACCCGAAGAGTAGAAGCAAGCAGTCGTGGCTGGAGGG
TGGGAAGCAGGAGGCGAGCAGAGGCTGGAGGGGAAGGATGGATGACCTTT
ATAGCCGATTTTTGGACTGGGCTTTTAACGAAAGGGCGGCCAGAGCAGGG
TCAATCACGCATTTGTGCCAGCCTCCTGAGTCAACTGCCCTGAAAGCGTG
AATGCGTCCACACTCTACCCATCAGTATGCCACCCGGAGTGCCTTGAGCA
CAGGGAATGGTAGATTTACCCTCATTTTGCGGTCCATTGTTTTCCTTTTT
TTCCTATCTGCATATCTATTGGGAAATTTGTGGATGACATTACCCATGGT
CCCTCGAGAAATGGGAAGAGAAACAAGTGCTGACGCGAGACCTCGATACA
GCGTGCTACGACACGGCAATCACGGTTCTGCTGCTTGGTCGCTAAGAAAT
CGTAACATGGAGGAAACTTCTGCGCATGTGCAGTCCTTTGAGGCCGCTAG
CTCAGACTTGAAAGCGCCCGACGGGACTGAAAACGAGGCGTTGGGCAGGT
ACATTGAACGATCCGGTAATGTGGTAGGAATAGAAGCAGCAGACACAGAA
ATGAATGCTTTGCTCGCAAGAGAGAAAAGTGGTGTAATCAAAATTCAAGA
CCAAGATGAAGAAGGTGAAAATCTGGAAGAGCTGGAGGAAAATGCGGTTG
AAGACTTTGGGCCAATCGAAGAGGATGGAGAGAGGAGCCTTTCCTCCTCC
TCTTCTTCCTCCACCTCCGCCCCTACCTCAACCTCGCCTTCCTCCATCTG
GCCCCCTCCATCATGGGCGTGGCCCCTCGACCCCGACCATGAAGCCTATG
GGAGAGACATGTTCAAGATTCGCTTTCCCCCTTCCGCCGCCGCCTCCAAT
GCAACTTGCACGGGCGCTGGCAGCCTCGATGAGGACTTGGACTTCACCCT
TGTCTCCCAAAGCTCGCCTGACAGAATCTGGATGCTCCCTCATATCTGTG
AGCGGTGGGAAGGGCCCATAATCGTCGCCATCTTCATGCACGGCTTCACC
GCCGAGCACGACGCCTTCATGGCAAACCTGAAGTGCCCCCAGCTGCAATG
TCTCCCAGTGCACCCCTCTGTCCCTGCCTCCAGCTCCATTCCCGCCTCAG
TATGGGCCGCACCAAACCTATATCCTGTCAATGCCTTGCGAAATCTCGCG
ATCTCGGAAGTGAGAACGACGCACTTCCTTCTCACGGACATGGACCTGTG
GCCTTCCCGCCGTCTCTACCCTCTCCTGAAGCACCTGTCGTCGAAGAGGG
AGATAGACAGTAAGGGCACGCGCGAGACGTTTCTGGACCCGCTTCAGGCG
CTAGTGGTGCCTGCTTTTAGTTATCTTGGACAAGTAACTGGAGGCGAGAA
GCAGGAGGCCAGGGAGGACAAGGTGGGAGGGATGCCGGACGACCAGAGGG
GCCTGGTGGAATGCTTGTGGAAGGGAAACTGCCTTGTGTTTGATGCTCAG
TACAACGTGCACGGCCACGGCACCACGGACACGGCCTACTGGGTGGGCCG
GCAGGAGAACGAAGAGATCAAGCCCATCCCTTGCTTTCTATCCAACAG back to top
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