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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100185g6.8949.mrna |
| Orig protein id | gnl|cribi|Naga_100185g6.8949 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:20530..21911 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3290 ID=rna3290|Name=rna3290|organism=Nannochloropsis gaditana|type=mRNA|length=2809bp
TGATTTCGCCAGACACTCGCAGGCGTTACTGTCGCAAGATGAGACTGTTG
GAATTTTGCAGATTGCGTGCATTTCTTTCTTTGCTTATGTCCGGTCCTGT
CGCTCCTCCGGTCTGTGGGTGAACTCGCCTTCCCTCTACACCCCCGTATA
CTTCCTTGCTTCTCCCTCACCGACGTACGCTCTTCCATTATTTCCTCCTT
TTCACCACATGTTCATGTAGGGGCCATTAAATTACGTTGGATGCGCTTCG
TAGGCTTGCCGTTCGACTTGCAGGGCCTGAGACAATTTACTGAGGCATCG
CGGCGTTCCTCCGCAGGCGCCTTTGACGCACACATATGAACAACCGGTAT
CGCGGTTTGGGATCAGCCAATAGTGGATTGCAGTCTCATGGCCCACAACG
CTTCTCATTGGCATGTCGTATCGCAACATGGACATGCATTGCTGGCATGG
GGGTCTTCGGCCTCCTTCTATTCCGCTTTTCTTCCTACTCCACCTCCCCA
TTTACGCTTCTCCCGCCCCACTCGATCTCTTCCCCTCCCTCCTCCACCGC
AGCCCCCAATTTTGCTCCCGCTTCCTCTCCAGAGACATTTCAAGCGAAAT
GCGCAGCAGCTAGCAAGTTGCTGCGGCAGCGCGGAGGTTGGGACTATATG
CGGGTTATGCGCGGAGGGCAGGCCAGCGTAGACAGTGTTGTCCACCAGGG
GAATCTGAATCGCCTCCACAAAGCCATAGCTCGAGCGAATGCTGAGGAGC
GACCCTTGAAAATCGCTGTGTTGGGGGGGTCGTTTTCGGCTGGAGGGGCG
GTCGCGGACATGGAAGACTCCTTTCCGGAGGTATTGGCTTCCCTCCTAGC
GGGAAAAGAGGAGGATGGAGGGGACGGGCCGATCCCAAGCACCCCAGTGC
AGTACGGTGCAGAGATCGTGAATATGGCGCAAGGAGGCGCCGGGTTTATG
TTGCCACTATTCTGCACCATGAAAGTCTACTCGCTGGTGGCAGAGGCCCC
AGAGCAAGTGCCGGACGTGTGGATCGTAGAATTTGGGGAGAATTTCGACT
CCAGTGTGGAGCAGTACGAGGCATTGCTAGCTATGCTCCTTTTTGACCAT
AACCGCTTCGGCCAGGCCGCGGTCCTGACCGCGGCAGTAGCCAAGAACTT
CTGCTGGTGGTCGGATGGGCCCATTCGCGCCAGCCAATGTGGTCTCCAGC
GGACGTGGGTCTGGCTGGAGGGGGTAGCTCAGAGAATGGCTGTGCCACTC
GTCTCCTTCGTGCATGGTGTGGCTCCCTGGGTGAACTACAGGCCACCGGC
CTGGGTGGAAAGCGTGGGGGGGGAGGGAGGGGCGCGGGACAGGGGGAGGA
CACTGCCAGGGCTCTTGCTTGGCAACACGAGTGAGCTGTCCAAGCAGGAG
TATCCAGGGTTATACGATAAGCTCGACCGGGTGGAAAAGCAGTTGTACGC
AGATTGTGGGGAGAACCAGCATTTTAACGAGTACGGGCATCGGCTGTTGG
GGCACTTTCTTTACGGCGTCTTTGTGGAGGCGGGCCGTAACGGTGGGAGG
GAGGAAAGCGAAGAGGAAATCATGACGAGGTTGTCGCCCCAGGCAGTGGA
AGTCTTTCACCGCGTGTCGAGTGGTTCTGAAGGCTACACTTTATCATGTA
ACCTGACCTTGACCCAGGTGCGTGGATGGGGAGCAACGAGTAAATGGAGA
GACGGCTGGGCCACCCTCCCCTTTTTTTGCGTGTGACTTCAGTTTCTCTA
TCGCCATGCCTAAGTACCGATTTGCGTTGCAGCTCTTCCATGACCATGCT
TATATTCGCTCGAGTGTAGTCTGAGTGTGGAAGGATTTTACCATGTTCAC
CACTTCATTCCCTACCTCCCCGTTGCCTTGCATCTTGCATTGCGCATTTA
GGGCCGTGCCCTGGACTTAATACCTACAGCGCGATACAATTATACCCTAT
GGAGCGAGAAGGCCGAGGGCAGCAGCAACATTTTTAGCGGTGGAAAGAAG
ACGCGCACGGATAGGAAGCAGACTTGGTCCCCTCTCTCTGAGAACGCCAC
ATTGGACTTTGACTTCACAGTGCCGCGCGGGGCGAGCACACTTTGTGTTC
TGATGTACGGTAGCCAAGGAATGTTTCTTGACGCTTCCTTTCCTGACCAC
CCTCAGCGGATGGTTGAAGAGGTCAACGGCGGGAGCGATGTGCAGGCTAG
CTCAACGAAACATGACGAGAAGAATGGTGGTCAGGAAGATGGGCTTTGTC
GACATGTCCAGCCGGACGGCAAAATCACGGTGGTAGCTTGTGGGAGCTCT
GTGGAGAAAAGTACCTGGCCGTCGACTCCTCATTCTCTTCGCACGAATAC
TAATACTGTCAGAAATGATACACAATCCTCAGCGAGCTCCTCGAAAGTAT
CGAAGGATATTTATCGGCATCCAGATGGCTCTCCCTCTTCAACTCGAGTG
AACAGCACATGTGTCTTCCGAGGAGGCGTAGACTGGACCATATACTCCGT
GTATAAGATAGACTGTAGCTGCTTGTTTCCTCAGGGGATGGCAGATGGAG
GGGTGCACAGAATTCAATTGAAAAATACGAAAGGTAAGGTCCAGGTCGCC
GGGGTTGTAATATGGTGAGCATGCGGTGACAGGAAACTCAATACTTGCTC
CCTTGATTGGTAGTCATCTTTAAGCTACAGTACGGTGCTTGTGAGAAGTG
AGTGAATGAGAGCCGCTAGAATCCTTGCAATTTTGTCGTAAATGAATAAA
AATATAAGGGAAACTGAAGCAAAGAATGTAATTATTGGTGTAGAAGGAAG
CATTTATTA back to topprotein sequence of rna3290 >rna3290-protein ID=rna3290-protein|Name=rna3290|organism=Nannochloropsis gaditana|type=polypeptide|length=308bp
MSAAIRAYGLPAHYLCLPSSCIIATKKHTANLSLHILAYFGLLTLAGYLS
SELLGRETQKLPGDATVSQPQTAQMHPFFSILVPMTLFPGTSTTFYVLQS
LKTVGVMVPGLDLLTIRPLGDICPSAYAIGKWITFLFRISEKLAYLLILL
SACGILAIELRILLGKQMTDLTSPDISRLWWPSEFTALRVFLGASSCLLG
ISIPFLVLYHFPFQLAHDLEQNPNSDPLLKTLFAEHTVYRFVHWEGAGID
DPSLVTILRAETSVVLVVALSLCWVGLGSKIMLPIPLTKRHSSHHHGNKN
SMFLTTVV back to topmRNA from alignment at CM002461.1:20530..21911+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3290 ID=rna3290|Name=rna3290|organism=Nannochloropsis gaditana|type=mRNA|length=1382bp|location=Sequence derived from alignment at CM002461.1:20530..21911+ (Nannochloropsis gaditana)
TAGACTACTCTTACTTGTCTATACAGACTATATGTTGTGCGCTGACTCAA
TTCAACTTCAACCATGTCTGCCGCTATCAGAGCATATGGTTTGCCAGCGC
ATTACCTGTGTTTGCCATCATCTTGCATAATAGCGACGAAAAAGCATACA
GCAAACCTTTCACTGCACATTTTAGCTTATTTTGGACTTCTGACTCTCGC
TGGATATCTTTCGAGTGAACTACTTGGCCGAGAGACCCAAAAATTACCTG
GAGATGCAACTGTCTCTCAACCTCAGACTGCGCAGATGCATCCCTTTTTC
TCCATCCTTGTGCCTATGACGCTATTTCCTGGGACTTCGACGACATTTTA
TGTCCTTCAAAGTCTGAAAACAGTTGGAGTGATGGTTCCTGGGCTAGATT
TGCTAACAATACGTCCTTTGGGTGACATTTGTCCAAGCGCTTATGCAATA
GGAAAATGGATTACTTTTCTATTTCGAATATCTGAAAAGTTAGCCTATTT
ATTGATCCTTCTGTCAGCTTGTGGAATACTTGCTATAGAATTGAGAATTT
TACTTGGCAAGCAAATGACGGACCTGACCTCTCCTGATATATCGAGGTTG
TGGTGGCCTTCTGAATTTACAGCCCTCCGTGTTTTCCTGGGGGCGAGCTC
CTGTCTTTTGGGGTACGTTATTTCCAACTCAATGATTACGCTTTTTATCC
CTCCTAACAGGAAAGTGTAGATCTGCCAAAGTTATTGAATTTACATTAAG
CGATCTAAACTCAATTCTGTCCCTATATTACCTTGTACAGCATCTCGATC
CCTTTTCTAGTTCTCTaccattttcccttccaacTCGCTCACGACCTGGA
ACAGAATCCGAATTCTGATCCATTGCTGAAAACCCTTTTTGCGGAGCATA
CAGTATATCGCTTCGTCCACtgggaaggagcgggcaTTGATGACCCAAGT
CTCGTCACCATCCTCCGGTAAGAGGGAATTAGTTTGCATGAATATTCACG
GGTCTACTACATTTCTTGAATTGCGCTCACTTAAAGCTGCACTGATCAGT
TAAATAAGTCACATGACGTATGTTTGGTCGTACTTTATACTTAGATAACT
TCACACGAACAACCACACGTATTTTGGAAAAAAGATTATCACGCATTCCT
TTATGACATAATTTCTCCAGCGCTGAGACGTCTGTGGTGCTTGTCGTAGC
TCTCAGCCTCTGCTGGGTGGGCTTAGGAAGCAAGATTATGCTTCCAATAC
CGCTGACTAAGCGGCATTCTTCTCACCACCACGGAAACAAGAATTCGATG
TTTTTAACGACTGTTGTATAATATAACGCATATTGCGCAAGCCAAAGAGA
AATCACGCCAAGGCGCTCCCAAGTTTTTACTC back to topCoding sequence (CDS) from alignment at CM002461.1:20530..21911+ >rna3290 ID=rna3290|Name=rna3290|organism=Nannochloropsis gaditana|type=CDS|length=2781bp|location=Sequence derived from alignment at CM002461.1:20530..21911+ (Nannochloropsis gaditana)
ATGTCTGCCGCTATCAGAGCATATGGTTTGCCAGCGCATTACCTGTGTTT
GCCATCATCTTGCATAATAGCGACGAAAAAGCATACAGCAAACCTTTCAC
TGCACATTTTAGCTTATTTTGGACTTCTGACTCTCGCTGGATATCTTTCG
AGTGAACTACTTGGCCGAGAGACCCAAAAATTACCTGGAGATGCAACTGT
CTCTCAACCTCAGACTGCGCAGATGCATCCCTTTTTCTCCATCCTTGTGC
CTATGACGCTATTTCCTGGGACTTCGACGACATTTTATGTCCTTCAAAGT
CTGAAAACAGTTGGAGTGATGGTTCCTGGGCTAGATTTGCTAACAATACG
TCCTTTGGGTGACATTTGTCCAAGCGCTTATGCAATAGGAAAATGGATTA
CTTTTCTATTTCGAATATCTGAAAAGTTAGCCTATTTATTGATCCTTCTG
TCAGCTTGTGGAATACTTGCTATAGAATTGAGAATTTTACTTGGCAAGCA
AATGACGGACCTGACCTCTCCTGATATATCGAGGTTGTGGTGGCCTTCTG
AATTTACAGCCCTCCGTGTTTTCCTGGGGGCGAGCTCCTGTCTTTTGGGC
ATCTCGATCCCTTTTCTAGTTCTCTaccattttcccttccaacTCGCTCA
CGACCTGGAACAGAATCCGAATTCTGATCCATTGCTGAAAACCCTTTTTG
CGGAGCATACAGTATATCGCTTCGTCCACtgggaaggagcgggcaTTGAT
GACCCAAGTCTCGTCACCATCCTCCGCGCTGAGACGTCTGTGGTGCTTGT
CGTAGCTCTCAGCCTCTGCTGGGTGGGCTTAGGAAGCAAGATTATGCTTC
CAATACCGCTGACTAAGCGGCATTCTTCTCACCACCACGGAAACAAGAAT
TCGATGTTTTTAACGACTGTTGTATAAATGTCTGCCGCTATCAGAGCATA
TGGTTTGCCAGCGCATTACCTGTGTTTGCCATCATCTTGCATAATAGCGA
CGAAAAAGCATACAGCAAACCTTTCACTGCACATTTTAGCTTATTTTGGA
CTTCTGACTCTCGCTGGATATCTTTCGAGTGAACTACTTGGCCGAGAGAC
CCAAAAATTACCTGGAGATGCAACTGTCTCTCAACCTCAGACTGCGCAGA
TGCATCCCTTTTTCTCCATCCTTGTGCCTATGACGCTATTTCCTGGGACT
TCGACGACATTTTATGTCCTTCAAAGTCTGAAAACAGTTGGAGTGATGGT
TCCTGGGCTAGATTTGCTAACAATACGTCCTTTGGGTGACATTTGTCCAA
GCGCTTATGCAATAGGAAAATGGATTACTTTTCTATTTCGAATATCTGAA
AAGTTAGCCTATTTATTGATCCTTCTGTCAGCTTGTGGAATACTTGCTAT
AGAATTGAGAATTTTACTTGGCAAGCAAATGACGGACCTGACCTCTCCTG
ATATATCGAGGTTGTGGTGGCCTTCTGAATTTACAGCCCTCCGTGTTTTC
CTGGGGGCGAGCTCCTGTCTTTTGGGCATCTCGATCCCTTTTCTAGTTCT
CTaccattttcccttccaacTCGCTCACGACCTGGAACAGAATCCGAATT
CTGATCCATTGCTGAAAACCCTTTTTGCGGAGCATACAGTATATCGCTTC
GTCCACtgggaaggagcgggcaTTGATGACCCAAGTCTCGTCACCATCCT
CCGCGCTGAGACGTCTGTGGTGCTTGTCGTAGCTCTCAGCCTCTGCTGGG
TGGGCTTAGGAAGCAAGATTATGCTTCCAATACCGCTGACTAAGCGGCAT
TCTTCTCACCACCACGGAAACAAGAATTCGATGTTTTTAACGACTGTTGT
ATAAATGTCTGCCGCTATCAGAGCATATGGTTTGCCAGCGCATTACCTGT
GTTTGCCATCATCTTGCATAATAGCGACGAAAAAGCATACAGCAAACCTT
TCACTGCACATTTTAGCTTATTTTGGACTTCTGACTCTCGCTGGATATCT
TTCGAGTGAACTACTTGGCCGAGAGACCCAAAAATTACCTGGAGATGCAA
CTGTCTCTCAACCTCAGACTGCGCAGATGCATCCCTTTTTCTCCATCCTT
GTGCCTATGACGCTATTTCCTGGGACTTCGACGACATTTTATGTCCTTCA
AAGTCTGAAAACAGTTGGAGTGATGGTTCCTGGGCTAGATTTGCTAACAA
TACGTCCTTTGGGTGACATTTGTCCAAGCGCTTATGCAATAGGAAAATGG
ATTACTTTTCTATTTCGAATATCTGAAAAGTTAGCCTATTTATTGATCCT
TCTGTCAGCTTGTGGAATACTTGCTATAGAATTGAGAATTTTACTTGGCA
AGCAAATGACGGACCTGACCTCTCCTGATATATCGAGGTTGTGGTGGCCT
TCTGAATTTACAGCCCTCCGTGTTTTCCTGGGGGCGAGCTCCTGTCTTTT
GGGCATCTCGATCCCTTTTCTAGTTCTCTaccattttcccttccaacTCG
CTCACGACCTGGAACAGAATCCGAATTCTGATCCATTGCTGAAAACCCTT
TTTGCGGAGCATACAGTATATCGCTTCGTCCACtgggaaggagcgggcaT
TGATGACCCAAGTCTCGTCACCATCCTCCGCGCTGAGACGTCTGTGGTGC
TTGTCGTAGCTCTCAGCCTCTGCTGGGTGGGCTTAGGAAGCAAGATTATG
CTTCCAATACCGCTGACTAAGCGGCATTCTTCTCACCACCACGGAAACAA
GAATTCGATGTTTTTAACGACTGTTGTATAA back to top
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