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Properties
| Property Name | Value |
|---|
| Product | Esterase, SGNH hydrolase-type |
| Orig transcript id | gnl|cribi|Naga_100185g7.8946.mrna |
| Orig protein id | gnl|cribi|Naga_100185g7.8946 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:17179..20257 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3289 ID=rna3289|Name=rna3289|organism=Nannochloropsis gaditana|type=mRNA|length=3292bp
GTCTGGCGAAATCAGCTGGCTGTGTAGGCGTGCCAATTATAAATCCGAAC
ATGGCTTGGGAAGGTTGAGCTAGGAGAGACACGTCACGGGCACCGAAGCT
AGCAAGTAGGCGAAGCAGAGAAGCCGGAGCGCAAACGAAGCCAGTCCCAG
CGATGTGAAGGGCAGGGTGGCTCAAACAGCTGCAGGTGACGGCCCTGAGG
GTTTCTATAATCTGTCGAGGCGATGTCTCCGAGTAAAGCGTGGAGTTTAT
GTGGACTCCAAGCTCTCGCATCTCCTCCCGACCGTCCGCAGCGTGCAAGC
CATGCCCCTCCGGCTTGGGGCGGTCGCGAGGGAGGGTGAAGACGCCAACA
GGTCGAAATCGACGCTTGCACGAACAGGTGGAAGGATTTACATAAATTGA
TAAGCGCAGAATCGGTGATAAAGACATAGACAGGAACTCAGGGTTCTGAG
TGCGCTGTTTTTTTGTGTCGTACACGCGTGTCTTGGCTCCTCCGGCACCG
CCAGATGGGGGCTTCCAAGCTACCACTGTGCTCTGTGCTCTCCTTTTTCG
TAAACCCACCTCCAACCTACTGAGCTTCTGCTTGTACACCATTTGCGCTA
GATTGTGGCTTTCCTTTATGGAGGCGGGCACCTGAAGGCCCCCATGGTCT
ACCTCCCGACAGTGTTCTTTGTAGCTGTGGAATTCATTGTCAGGACATCT
TTCTCCTGTCAACTTATTCTTTCATGAACAATTCGCTTTTCAAACACGCG
ATTACGAAGCACAGACAGAGGCCTCTCTTGGGCGCCGCGCGTGATCAACG
CCTGGAGATTGAGACGTGATGGGGGCGTATCTCAGTAGTCCAGTGACCGA
GAAGGATTGGGAGGATGGGGAGTACGGGCGTCTCCGATATGGAATTGCCG
CAATGCAGGGTTGGCGCCGGAATATGGAAGATGCGCATTTGGCAGAGGCT
GAGGTGGAAGGCGATGAACGTACCGCCATGTTTGGTGTCTTTGACGGGCA
CGGAGGCAGAGAAGTCGCACATTTTGTTGCCCGGCATTTCATTGAAGAGG
TGGTGAAGCAGCGGGAATGGAAGGACGGTGCTTACGAAGATGCCCTGCGG
CAATCTTTCCATCGGATGGACGAGCTGCTACGGAGGGATGAATTCGACAG
CGAGCTGAAGCTGTACAAAGTATGTGCACCGACAGCGGCCGCCTCAGGGA
AAGCGTCGAGCCTCACCCCCCAAGGGTCGGTCCCTCCCAAGGGAAGCGAT
GAGGGCGAGACGCCCCGATCCACATCACCTGTGGCAGACTCAGAAGGGGG
CGTTGGAGGAGCGAGGGACGAAAGCAAGGGGCGGCTTCCGGACCCAGCAG
TGCTCAAGCTGGAAGGTCTCAGCCTAGGGGATGGACAGGAGGGAGGGTCG
GGGGAGAGGGGCGGGAGGAAGACGCAGGGCAGCGACCAGGCGGGCGCAGG
TGTTGGAGGCAAGGAGGAAGGCGTGAATGTAGAGAAAGGAGAGGGAGAAA
AGGAGAGGAAGGAGGTGTTAAGAGCAGGGGGGGGGCAGGGAGTAGCCGCA
CTGACGCGCAGAGCGACATCGGTCTCGGACGGAGCGATTCCCGAGGAGGA
CGTGGTGCTGGGAAGAAGAGAGGGGCTGGAGAAGGAAGAAGGGAGTGGAC
TTGCCCTGCGGCCTGTGGAGGACCCCAACCTCCGGGAGGAGGCGGAGGGT
TTGCCCCGCAGCCCTCTGCCCTTCGAGGAGGCGGCGACAGAGCTCCTGAA
AGCGCAAGGCATCTCACCTCCCTTCCCGAGGGGGGAGACGGGCGAAGAGG
ATGAAGAGGGGGGAGCGGGTGGAGGGGGCGGACGGGCAGCGAGTGAGGTG
GCAGAGATGGCGGGCGTGATCGTTACGGAGTTGCTGAATCGAGTCAAGGG
CGAGGAAGCGGGGTCTGAAGGCCCGGGAGGCGCGAGGGAGGAGGGGGAAA
GGGGGACGGGTGCCAGTGGGGGGAGGGAGGGAGAAGAAAGCGAGACCGAG
GGCAGCTTGGGCACGGACGCTTCCTCGGACGCCGTCGTCTCATCTTCCTA
CCCCCCACCAGCCTCGACCTTCCGAACCGCCGGGTCCCGTGCTCGATGCG
CTCTCCCTGATCATCGGGTCCAAGCCGGCTGCACGTCGGTGGTGGCCCTG
ATCGTGGAAAAGGAATTGTTCGTGGCCAACGCCGGGGACTCAAGGGCGGT
GCTCTGCCGGGGCGGCAGGGCTATCGCGCTCACGGAGGATCACAAGCCTT
TCCAAGACAGGGAGATGGAGCGCATTCGAAAAGCGGGAGGGTTCGTGACC
GAACAGGGGCGGGTGAATGGAAATTTGAACCTAAGTCGGTCGATCGGAGA
TTTGAAGTACAAAGGCAACCTGTCCCTGCCTGCCAAGGACCAAATGATCA
CGGCGGAGCCGGACCTGGCGCGTATCACCTTGGTGCCCGAGGATGAGTTT
CTCGTGCTGGCATGCGATGGGATCTGGGACTGTCTGAGTAATCAAGAGTG
TGTGGACTTTGTGCGGTCTCGGCTGGAGGCTTGGAAGGAGGAGAAGAGGG
AGTGGGACCCCCTGAGCAAGATCGCCGAGGAGATGCTGGACGCCTGCTTG
GCAGACGACCCGCGCAAGACAACGGGAGTGGGGGGCGACAACATGACCTG
CCTGATCGTGCAACTGAAGGCGCGGCCGGGCCTGAAGCGTGCAGGGGATG
TGAAGAGAGAGGGACCGGCGGTCGGAGAGGAGCAAATTTCGTCCTAAGCC
CGGCACGGAGAGAGGGGAAGGACCGCTTGATCAGTCGGGATGGAGCGGCC
GAGGGGATGGGGTTTAGCATTGGGGTGCGATGCTAAATAAGGACGCGAGT
AATAGATGCATTGATAAGAGATAGGTTAAGAAATGCAAGCAAATCAAGAA
AAATAACCAAGGTGGAGGTCTGAAGAAAGGCAAATCAGATCCGCCTCGTC
AATCGGCATGCGTGCGGCGTGTGAGAGTAGGAACAGGGAGGGGGAAAAGG
GGCACAGGATCAGCTGAGGGCTCTCCCTTATAGAAGGAACTGCTATTGTA
CCGGCGTAAGAAAACGAGACAACTAGAGGATTTAGTTGCGAGGAAGGCAG
CAGGAGCAGAGCAGCAGGGGTGTGGCAGCACGAACCAAAAATGCCAAAAG
CATAGAGGACTTACGAAAGAAATGAGAGGTGAATAAATCGCAAAATGCAT
CGTGGTTGGCATTGCTGGTGGGTGTGTCCCGAAGTTTGTAGTTCATCTTA
CCAAAGAATACCTGCATAACGTATAATGTATCAGCTCTCTCC back to topprotein sequence of rna3289 >rna3289-protein ID=rna3289-protein|Name=rna3289|organism=Nannochloropsis gaditana|type=polypeptide|length=466bp
MNNRYRGLGSANSGLQSHGPQRFSLACRIATWTCIAGMGVFGLLLFRFSS
YSTSPFTLLPPHSISSPPSSTAAPNFAPASSPETFQAKCAAASKLLRQRG
GWDYMRVMRGGQASVDSVVHQGNLNRLHKAIARANAEERPLKIAVLGGSF
SAGGAVADMEDSFPEVLASLLAGKEEDGGDGPIPSTPVQYGAEIVNMAQG
GAGFMLPLFCTMKVYSLVAEAPEQVPDVWIVEFGENFDSSVEQYEALLAM
LLFDHNRFGQAAVLTAAVAKNFCWWSDGPIRASQCGLQRTWVWLEGVAQR
MAVPLVSFVHGVAPWVNYRPPAWVESVGGEGGARDRGRTLPGLLLGNTSE
LSKQEYPGLYDKLDRVEKQLYADCGENQHFNEYGHRLLGHFLYGVFVEAG
RNGGREESEEEIMTRLSPQAVEVFHRVSSGSEGYTLSCNLTLTQVRGWGA
TSKWRDGWATLPFFCV back to topmRNA from alignment at CM002461.1:17179..20257+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3289 ID=rna3289|Name=rna3289|organism=Nannochloropsis gaditana|type=mRNA|length=3079bp|location=Sequence derived from alignment at CM002461.1:17179..20257+ (Nannochloropsis gaditana)
TGATTTCGCCAGACACTCGCAGGCGTTACTGTCGCAAGATGAGACTGTTG
GAATTTTGCAGATTGCGtgcatttctttctttgcttATGTCCGGTCCTGT
CGCTCCTCCGGTCTGTGGGTGaactcgccttccctctacACCCCCGTATA
CTTCCttgcttctccctcaccgACGTACGCTCTTCCAttatttcctcctt
ttcaccaCATGTTCATGTAGGGGCCATTAAATTACGTTGGATGCGCTTCG
TAGGCTTGCCGTTCGACTTGCAGGGCCTGAGACAATTTACTGAGGCATCG
CGGCGTTCCTCCGCAGGCGCCTTTGACGCACACATATGAACAACCGGTAT
CGCGGTTTGGGATCAGCCAATAGTGGATTGCAGTCTCATGGCCCACAACG
CTTCTCATTGGCATGTCGTATCGCAACATGGACATGCATTGCTGGCATGG
GGGTCTTCGGCCTCCTTCTATTCCGCTTTTCTTCCTACTCCACCTCCCCA
TTTACGCTTCTCCCGCCCCACTCgatctcttcccctccctcctccaccgc
agcCCCCAATTTtgctcccgcttcctctccagaGACATTTCAAGCGAAAT
GCGCAGCAGCTAGCAAGTTGCTGCGGCAGCGCGGAGGTTGGGACTATATG
CGGGTTATGCGCGGAGGGCAGGCCAGCGTAGACAGTGTTGTCCACCAGGG
GAATCTGAATCGCCTCCACAAAGCCATAGCTCGAGCGAATGCTGAGGAGC
GACCCTTGAAAATCGCTGTGTTGGGGGGGTCGTTTTCGGCTGGAGGGGCG
GTCGCGGACATGGAAGACTCCTTTCCGGAGGTATTGGCTTCCCTCCtagc
gggaaaagaggaggatggaggggacgggCCGATCCCAAGCACCCCAGTGC
AGTACGGTGCAGAGATCGTGAATATGGCGCAAGGAGGCGCCGGGTTTATG
TTGCCACTATTCTGCACCATGAAAGTCTACTCGCTGGTGGCAGAGGCCCC
AGAGCAAGTGCCGGACGTGTGGATCGTAGAATTTGGGGAGAATTTCGACT
CCAGTGTGGAGCAGTACGAGGTGCGTTCTTGAGTTAGGTTAGCCTACGTC
CTCTCCCAATCGCACTCCGACGACTTGCTAGCGTCATTCTTTGTAGTGTT
AGGGTTATGACTAGTCgccctttccatttccttaattcttcctcctttcc
gtcgCTTTGtctccgctttcctttcgTCTCCCTAGGCATTGCTAGCTATG
CTCCTTTTTGACCATAACCGCTTCGGCCAGGCCGCGGTCCTGACCGCGGC
AGTAGCCAAGAACTTCTGCTGGTGGTCGGATGGGCCCATTCGCGCCAGCC
AATGTGGTCTCCAGCGGACGTGGGTCTGGCTGGAGGGGGTAGCTCAGAGA
ATGGCTGTGCCACTCGTCTCCTTCGTGCATGGTGTGGCTCCCTGGGTGAA
CTACAGGCCACCGGCCTGGGTGGAAagcgtggggggggagggaggggcgc
gggacagggggaggacactGCCAGGGCTCTTGCTTGGCAACACGAGTGAG
CTGTCCAAGCAGGAGTATCCAGGGTTATACGATAAGCTCGACCGGGTGGA
AAAGCAGTTGTACGCAGATTGTGGGGAGAACCAGCATTTTAACGAGTACG
GGCATCGGCTGTTGGGGCACTTTCTTTACGGCGTCTTTGTGGAGGCGGGC
CGTaacggtgggagggaggaaagcgaagaGGAAATCATGACGAGGTTGTC
GCCCCAGGCAGTGGAAGTCTTTCACCGCGTGTCGAGTGGTTCTGAAGGCT
ACACTTTATCATGTAACCTGACCTTGACCCAGGTGCGTGGATGGGGAGCA
ACGAGTAAATGGAGAGACGGCTgggccaccctcccctttttttgCGTGTG
ACTTCAGTTTCTCTATCGCCATGCCTAAGTACCGATTTGCGTTGCAGCTC
TTCCATGACCATGCTTATATTCGCTCGAGTGTAGTCTGAGTGTGGAAGGA
TTTTACCATGTTCACCACTTcattccctacctccccgtTGCCTTGCATCT
TGCATTGCGCATTTAGGGCCGTGCCCTGGACTTAATACCTACAGCGCGAT
ACAATTATACCCTATGGAGCGAGAAGGCCGagggcagcagcaacatTTTT
AGCGGTGGAAAGAAGACGCGCACGGATAGGAAGCAGACTTGGTCCCCTCT
CTCTGAGAACGCCACATTGGACTTTGACTTCACAGTGCCGCGCGGGGTAC
GTTCGCAGGCTCTGGAAGTGAAGAGTACGCAGTCGTTTCAGGGGACTGCT
TGAGAAACAATCTGATTCTTGCTTTTTCGTTCTGGATGCATTCACTTACA
GGCGAGCACACTTTGTGTTCTGATGTACGGTAGCCAAGGAATGTTTCTTg
acgcttcctttcctgacCACCCTCAGCGGATGGTTGAAGAGGTCAACGGC
GGGAGCGATGTGCAGGCTAGCTCAACGAAACATGACGAGAAGAATGGTGG
TCAGGAAGATGGGCTTTGTCGACATGTCCAGCCGGACGGCAAAATCACGG
TGGTAGCTTGTGGGAGCTCTGTGGAGAAAAGTACCTGGCCGTCGACTCCT
CATTCTCTTCGCACGAATACTAATACTGTCAGAAATGATACACAATCCTC
AGCGAGCTCCTCGAAAGTATCGAAGGATATTTATCGGCATCCAGAtggct
ctccctcttcaactCGAGTGAACAGCACATGTGTCTTCCGAGGAGGCGTA
GACTGGACCATATACTCCGTGTATAAGATAGACTGTAGCTGCTTGTTTCC
TCAGGGGATGGCAGATGGAGGGGTGCACAGAATTCAATTGAAAAATACGA
AAGGTAAGGTCCAGGTCGCCGGGGTTGTAATATGGTGAGCATGCGGTGAC
AGGAAACTCAATACTTGCTCCCTTGATTGGTAGTCATCTTTAAGCTACAG
TACGGTGCTTGTGAGAAGTGAGTGAATGAGAGCCGCTAGAATCCTTGCAA
TTTTGTCGTAAATGAATAAAAATATAAGGGAAACTGAAGCAAAGAATGTA
ATTATTGGTGTAGAAGGAAGCATTTATTA back to topCoding sequence (CDS) from alignment at CM002461.1:17179..20257+ >rna3289 ID=rna3289|Name=rna3289|organism=Nannochloropsis gaditana|type=CDS|length=2802bp|location=Sequence derived from alignment at CM002461.1:17179..20257+ (Nannochloropsis gaditana)
ATGAACAACCGGTATCGCGGTTTGGGATCAGCCAATAGTGGATTGCAGTC
TCATGGCCCACAACGCTTCTCATTGGCATGTCGTATCGCAACATGGACAT
GCATTGCTGGCATGGGGGTCTTCGGCCTCCTTCTATTCCGCTTTTCTTCC
TACTCCACCTCCCCATTTACGCTTCTCCCGCCCCACTCgatctcttcccc
tccctcctccaccgcagcCCCCAATTTtgctcccgcttcctctccagaGA
CATTTCAAGCGAAATGCGCAGCAGCTAGCAAGTTGCTGCGGCAGCGCGGA
GGTTGGGACTATATGCGGGTTATGCGCGGAGGGCAGGCCAGCGTAGACAG
TGTTGTCCACCAGGGGAATCTGAATCGCCTCCACAAAGCCATAGCTCGAG
CGAATGCTGAGGAGCGACCCTTGAAAATCGCTGTGTTGGGGGGGTCGTTT
TCGGCTGGAGGGGCGGTCGCGGACATGGAAGACTCCTTTCCGGAGGTATT
GGCTTCCCTCCtagcgggaaaagaggaggatggaggggacgggCCGATCC
CAAGCACCCCAGTGCAGTACGGTGCAGAGATCGTGAATATGGCGCAAGGA
GGCGCCGGGTTTATGTTGCCACTATTCTGCACCATGAAAGTCTACTCGCT
GGTGGCAGAGGCCCCAGAGCAAGTGCCGGACGTGTGGATCGTAGAATTTG
GGGAGAATTTCGACTCCAGTGTGGAGCAGTACGAGGCATTGCTAGCTATG
CTCCTTTTTGACCATAACCGCTTCGGCCAGGCCGCGGTCCTGACCGCGGC
AGTAGCCAAGAACTTCTGCTGGTGGTCGGATGGGCCCATTCGCGCCAGCC
AATGTGGTCTCCAGCGGACGTGGGTCTGGCTGGAGGGGGTAGCTCAGAGA
ATGGCTGTGCCACTCGTCTCCTTCGTGCATGGTGTGGCTCCCTGGGTGAA
CTACAGGCCACCGGCCTGGGTGGAAagcgtggggggggagggaggggcgc
gggacagggggaggacactGCCAGGGCTCTTGCTTGGCAACACGAGTGAG
CTGTCCAAGCAGGAGTATCCAGGGTTATACGATAAGCTCGACCGGGTGGA
AAAGCAGTTGTACGCAGATTGTGGGGAGAACCAGCATTTTAACGAGTACG
GGCATCGGCTGTTGGGGCACTTTCTTTACGGCGTCTTTGTGGAGGCGGGC
CGTaacggtgggagggaggaaagcgaagaGGAAATCATGACGAGGTTGTC
GCCCCAGGCAGTGGAAGTCTTTCACCGCGTGTCGAGTGGTTCTGAAGGCT
ACACTTTATCATGTAACCTGACCTTGACCCAGGTGCGTGGATGGGGAGCA
ACGAGTAAATGGAGAGACGGCTgggccaccctcccctttttttgCGTGTG
AATGAACAACCGGTATCGCGGTTTGGGATCAGCCAATAGTGGATTGCAGT
CTCATGGCCCACAACGCTTCTCATTGGCATGTCGTATCGCAACATGGACA
TGCATTGCTGGCATGGGGGTCTTCGGCCTCCTTCTATTCCGCTTTTCTTC
CTACTCCACCTCCCCATTTACGCTTCTCCCGCCCCACTCgatctcttccc
ctccctcctccaccgcagcCCCCAATTTtgctcccgcttcctctccagaG
ACATTTCAAGCGAAATGCGCAGCAGCTAGCAAGTTGCTGCGGCAGCGCGG
AGGTTGGGACTATATGCGGGTTATGCGCGGAGGGCAGGCCAGCGTAGACA
GTGTTGTCCACCAGGGGAATCTGAATCGCCTCCACAAAGCCATAGCTCGA
GCGAATGCTGAGGAGCGACCCTTGAAAATCGCTGTGTTGGGGGGGTCGTT
TTCGGCTGGAGGGGCGGTCGCGGACATGGAAGACTCCTTTCCGGAGGTAT
TGGCTTCCCTCCtagcgggaaaagaggaggatggaggggacgggCCGATC
CCAAGCACCCCAGTGCAGTACGGTGCAGAGATCGTGAATATGGCGCAAGG
AGGCGCCGGGTTTATGTTGCCACTATTCTGCACCATGAAAGTCTACTCGC
TGGTGGCAGAGGCCCCAGAGCAAGTGCCGGACGTGTGGATCGTAGAATTT
GGGGAGAATTTCGACTCCAGTGTGGAGCAGTACGAGGCATTGCTAGCTAT
GCTCCTTTTTGACCATAACCGCTTCGGCCAGGCCGCGGTCCTGACCGCGG
CAGTAGCCAAGAACTTCTGCTGGTGGTCGGATGGGCCCATTCGCGCCAGC
CAATGTGGTCTCCAGCGGACGTGGGTCTGGCTGGAGGGGGTAGCTCAGAG
AATGGCTGTGCCACTCGTCTCCTTCGTGCATGGTGTGGCTCCCTGGGTGA
ACTACAGGCCACCGGCCTGGGTGGAAagcgtggggggggagggaggggcg
cgggacagggggaggacactGCCAGGGCTCTTGCTTGGCAACACGAGTGA
GCTGTCCAAGCAGGAGTATCCAGGGTTATACGATAAGCTCGACCGGGTGG
AAAAGCAGTTGTACGCAGATTGTGGGGAGAACCAGCATTTTAACGAGTAC
GGGCATCGGCTGTTGGGGCACTTTCTTTACGGCGTCTTTGTGGAGGCGGG
CCGTaacggtgggagggaggaaagcgaagaGGAAATCATGACGAGGTTGT
CGCCCCAGGCAGTGGAAGTCTTTCACCGCGTGTCGAGTGGTTCTGAAGGC
TACACTTTATCATGTAACCTGACCTTGACCCAGGTGCGTGGATGGGGAGC
AACGAGTAAATGGAGAGACGGCTgggccaccctcccctttttttgCGTGT
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