rna3255, rna3255 (mRNA) Nannochloropsis gaditana

Overview
Namerna3255
Unique Namerna3255
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length756
Alignment locationCM002460.1:1130802..1132122 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101958g1.8994.mrna
Orig protein idgnl|cribi|Naga_101958g1.8994
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1130802..1132122 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101958g1gene3134Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27427.1cds3246Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3255rna3255-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3255 ID=rna3255|Name=rna3255|organism=Nannochloropsis gaditana|type=mRNA|length=756bp
GTGGGGGAAGGGGGAAAAGGGTGTCCTCTACCTCTTTCTCTGCCCTTGCG
ATCATCTTTGCCTCGCGTACCCTCCCTTGGGACGGCCTGTAAACCCACCG
GCCCCGGTTCCGATCTCTTCCCGGCGACTTATCCGCAACATTTCTCTCCT
TCTATGTTTATGTGTCAACGCTCTCCGTTGCAGCCCTTTGTTCATCCTTT
TCCTCCCCTCCCTCCCCCCCCCCTCCTTTCCTTCTTTCCCTCCACCGCCC
CTCTCTTTCTCCTTGGGCCACGCTCCTCCATCCTTCCCCTGTTCCCAGCA
ATGCCGACAAGCCCTGGACAGCCTCGTCGCCAGATTTTACTCCGATGCCG
TGGAGGCACGAGAAACGCCCGAAGTGAAGTACTGCGCGAGCATGCTGCAA
TATCTCGACGCGCGCCTGGAACGGGCAGGGGACGCTGCCCAGCGGCGGGA
AGAAGAAAAGTTGGCGCGTGTGGCCGCGGGAGAGGAAGGAGGGGGACTCA
GGGAAGGAGGAGACTGGAAGGGGAGTGTGGGTCACCTTTTGGGGCTTATG
TGCGGTCATAATGCGTCGTTCTCGGAAGAAGAGAGGGCAAGGTTGATGTA
TCACCTGTCACGGGGGTGGACAGTCGAGTCCTTTGCCGGCCCCTGAGAAA
AAAGTAGAAGCTTGCGAGGCAAAGGGTCATGACTGAGATACTCCAGCAAT
ATCGGCATGTAAAACATAATTATGCCGCCTCCTGGTCGGTTCCGTTACCG
CTTTGG
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protein sequence of rna3255

>rna3255-protein ID=rna3255-protein|Name=rna3255|organism=Nannochloropsis gaditana|type=polypeptide|length=223bp
PPSLRPSLPPSQLPRPRSHGCGGHWARPACLPPLIPLLLLRLRILFHSRR
RLFQRGGGGGGGREGKSRHLLRGCPSRKRGGGGGGRGGGGRRGDDAHGLL
PLPQAAPRSRRTQEFILLRILLLCFLPSLPLVHALLLALPPPSYLRRGRK
TRGKLAGATDGYGAYSAGGKTDGRREGGREGGREGVSHLAMAGDEILAWA
VRCTRSPSNSLPAARRSRPFSRL
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mRNA from alignment at CM002460.1:1130802..1132122-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3255 ID=rna3255|Name=rna3255|organism=Nannochloropsis gaditana|type=mRNA|length=1321bp|location=Sequence derived from alignment at CM002460.1:1130802..1132122- (Nannochloropsis gaditana)
CCTCCTTCCCTCCGTCCCTCCCTCCCTCCCTCCCAGCTCCCGCGCCCACG
ATCTCATGGATGCGGAGGCCACTGGGCACGGCCAGCGTGCCTCCCTCCCC
TTATCCCCCTCCTCCTCCTCCGCCTCCGTATCCTCTTCCACAGCCGACGA
CGGCTTTTTCAGCGAGGGGGAGGGGGAGGGGGAGGGAGGGAAGGCAAGTC
GCGCCACCTCCTCCGAGGCTGTCCCAGCAGGAAGCGAGGAGGAGGAGGGG
GAGGAAGAGGAGGAGGAGGACGAAGAGGAGATGATGCGCATGGGCTCCTA
CCACTACCACAAGCAGCGCCACGGTCCAGGCGGACGCAGGAATTCATTCT
ACTCCGCATCCTCCTCCTTTGCTTCCTCCCCTCCCTCCCCCTCGTCCATG
CCCTCCTCCTCGCCCTCCCCCCCCCCTCCTACCTTAGGAGAGGTCGGAAG
ACGAGAGGGAAACTTGCGGGTGCTACAGATGGGTATGGCGCCTATTCAGC
AGGTGGGAAGACAGACGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGTGAGTCATCTGGCCATGGCGGGCGATGAGATCCTGGCGTGGGCT
GTACGATGCACACGTAGCCCCTCAAATTCCCTCCCGGCGGCGCGAAGGAG
TAGGCCATTTTCACGGCTTTAGCGCCCCTCCGAGCTTATTCGCAGGAATC
AATATCGCTCTGTCCACCGATGGTGCTATTTACCTCTGTATCTATCCATT
CCTCTATCCATCCACACATCGCTCCCTCTAGCCTTCCGATGAATGTATCC
ATCTACCCCCCACCTTTTCCATGTGCTCAGCCATCACTCCCCCCGCCAAG
CCATCCCTCCCTCCATCCATCCACCCCCGGCACCCCCCGCCTCCCTTCTC
CCTTTCCATCAGGCCTGGCGGGCACTCGCGCGCTGCGACAATCTGTGTGG
CCGCCTCCTCGGGCAAGCCGTCTCCGTGGAGGGCACAGGGGTGAGGGAGT
GGCTGTGCTGCCTGGTCACCTTCGGGCCGGGCCAAGAGGTAGGTAGGTAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGCAATC
TTTGATGATTTCCTACGGTCCTGCAGGCGGTGGCCAAGTTGGGCAGCTTG
CCGCGGAGCGAGCGCGAGCACAACTTCCTTCCCAAGCTGAGCGTTAAGGT
AACGTCCGTGGTGTTTGAACGAGAAATTTGGAATTTCGATGCCGACTTAA
CGCATGTTTTTATGGATTCATGCACCCATATATATATATATATATACAAA
TCACCTGAGGGAGGGTTGGAG
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Coding sequence (CDS) from alignment at CM002460.1:1130802..1132122-

>rna3255 ID=rna3255|Name=rna3255|organism=Nannochloropsis gaditana|type=CDS|length=672bp|location=Sequence derived from alignment at CM002460.1:1130802..1132122- (Nannochloropsis gaditana)
CCTCCTTCCCTCCGTCCCTCCCTCCCTCCCTCCCAGCTCCCGCGCCCACG
ATCTCATGGATGCGGAGGCCACTGGGCACGGCCAGCGTGCCTCCCTCCCC
TTATCCCCCTCCTCCTCCTCCGCCTCCGTATCCTCTTCCACAGCCGACGA
CGGCTTTTTCAGCGAGGGGGAGGGGGAGGGGGAGGGAGGGAAGGCAAGTC
GCGCCACCTCCTCCGAGGCTGTCCCAGCAGGAAGCGAGGAGGAGGAGGGG
GAGGAAGAGGAGGAGGAGGACGAAGAGGAGATGATGCGCATGGGCTCCTA
CCACTACCACAAGCAGCGCCACGGTCCAGGCGGACGCAGGAATTCATTCT
ACTCCGCATCCTCCTCCTTTGCTTCCTCCCCTCCCTCCCCCTCGTCCATG
CCCTCCTCCTCGCCCTCCCCCCCCCCTCCTACCTTAGGAGAGGTCGGAAG
ACGAGAGGGAAACTTGCGGGTGCTACAGATGGGTATGGCGCCTATTCAGC
AGGTGGGAAGACAGACGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGTGAGTCATCTGGCCATGGCGGGCGATGAGATCCTGGCGTGGGCT
GTACGATGCACACGTAGCCCCTCAAATTCCCTCCCGGCGGCGCGAAGGAG
TAGGCCATTTTCACGGCTTTAG
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Synonyms
Publications