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Properties
| Property Name | Value |
|---|
| Product | atp-dependent metalloprotease |
| Orig transcript id | gnl|cribi|Naga_100003g173.1750.mrna |
| Orig protein id | gnl|cribi|Naga_100003g173.1750 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:799290..802532 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna323 ID=rna323|Name=rna323|organism=Nannochloropsis gaditana|type=mRNA|length=2323bp
CCGACAAGCCACGTTTGCGTGGAAAGTACACCACTAAGATCTTTGGATGT
CTGCAACGACTATTCCCACTTGTGCGCTTTGAGCGAAATTTCAATATTCC
TCTTGGGCAGCTACATTTCTTTCCGTCTTTGTCAGCGAAGGGGCAGGTTG
GTGCGGTGGTCTGATTTGGATCGGACAGATTGGACACGAGTGTCTGACCA
GACCTCCCCACCCTACGCTCTGACACAAGCCCGTGTCGACCCCTGCAAGG
ACTCTCATGCATGGGGTAAAGGCAAAAAGACTGTGAGCAATTGATGAGGC
ACTGATTCTGGGTCCTCATAAGGAACTTATCTTAGGTGTTATTTTTATCA
AAAGCGAAAAATTCATAAGTAAAATGCACGCAGTAAGTATGTGCTTCGAC
TGAAGGATGCTTGCTCACTTGATGATTCATTTATATATCACAGACAGAAG
TCAATCAAACTTGTCTGTGAACGATGGACTTCGTGAATCATCCAATGGGT
GCAGCGGAAGAGACAGTGAGGACGCCTACCGGGGCAGGGCCCGAGCCTGT
CAACATCAGAGAGTTCGAGGCCTACGCGAAAGCGACCCTCCCCAAAAATG
CTTTCGATTATTATGCTAGCGGAGCCAACGACATGATAACATTACGAGAA
AATCGAGCGGCTTTCGAACGCCTGCGCATGCGGCCCCGCATTCTTCGGGA
TGTAAGTCATGTGGACACCCGGACTACTGTCCTCGGAGACCCCGTGGCAT
TCCCCATCTGTGTTGCACCCACCGCGATGCAGCGGATGGCCAGTCCGGAA
GGAGAGTTGGCTACAGCTCGTGCATGTGCTCGGCAGCAAACACTGATGAC
ATTATCTTCCTGGTCGACGACATCAGTCGAAGACGTGGCAGCGGCCGCCC
CGATTCCTAAATGGTTCCAGCTGTACGTCTATAAAGATAGAGAGCTAACG
GCGGAGCTGGCCAGGCGCGCAGAGCGAGCAGGATACAAGGCGTTGGCAAT
CACTGTGGACACCCCCGTCCTTGGAAGACGGGAAGCAGATGTTCGAAACC
GCTTCAAGTTGCCGGCGCACCTGACCATGGCGAACTTCGCGGGGGCAGGG
GGTTCGCACGCGGAGGGCACCAAAGATGGAGGAAAGGACTCTGGCCTGGC
CGCCTATGTGGCCTCCCTTATCGACCGAACCCTGCAGTGGAAGGATGTGC
AGTGGTTGCGCAGCATTTGCAACCTGCCCATCGTGGTGAAGGGGGTCATG
ACGCCGGAGGACGCGCTCGTGGCCATGCAGTGCGGAGTCGACGCCATCTG
GGTCTCGAACCACGGCGCGCGCCAGCTCGACACGGTGGCCTCCACCATCG
AGCTCCTCCCTGATATCGTGAAGGCCGTCAACGGTCGCTGTGAGGTTTAC
CTCGACGGCGGTGTTTGCCGCGGGACGGACGCTTTCAAGGCACTGGCCCT
GGGGGCCCGCGCCGTCTTCATCGGCCGCCCCGTTCTGTGGGGCTTGGCGC
ACAGCGGGGAGGACGGGGTGTATCAGGTGCTAGAGCTCCTGAAGAAGGAG
TTCGAAATGGCCATGCAGCTGACAGGGTGCACAAAGCTTTCGGATATCCA
GCGGTCTATGGTCACGCATGTAGTCTCGTACCAATCCAAGATCTAGATCG
GGCAGAATGTTCACAGCCAGCGGAGTACGGATAGGAAGGCATGATTACTA
CGTTGGAGGGGTGGTTTGAGACAGAAGACAAGCAGAGATCGAGCGTCGGA
ATTTTCTCGAGTAGCGGGGACGGAAAAGCACATAATGGGGGGTCATCTTG
GCCGCCTGTGGTGAAACGGGGACGAGCCTATTGACGATGTGAATTCTTGC
TCCGATTCATGGACTTGCAAGTCAAAGCCTCACGTCAGTCTCTCGTGCCA
TTTTTAGTCGGGATAATTGGAGACTGTGCGCAACCACGCGTACAAAAGGT
GCAAAGAGCGGTTGTGGAGTAGAACGGGACGTTGAAGAGGGAAAGACAAT
ATTTATGTAAGTTCGACGCCGTATTTGGGAAGGATTCGCCTTCTAAATGC
CAACCACAGAAAAATCTGGTGGCAGATCCAAGCGTAAAGCCTTGGGGGGA
GGGGAGAAACGAGAAAAGATTCCTCAGACAATGGGATGAGAAGAAGGAAA
ATGTGAGCAAGCACACTGGTCCGAAAGAAGTTTTTCGTTGAATCTCACAG
TGCTGTATCAACTGGGTTGTTGAGCCGGTCGTTTTCCAGAGACGAGGCTC
ACGGTCAGTACGCAGAAACTCGAGGATGGCCTAATAGAGCATTTCAGACA
ACTAATTTTGGCCTCCTTTAACG back to topprotein sequence of rna323 >rna323-protein ID=rna323-protein|Name=rna323|organism=Nannochloropsis gaditana|type=polypeptide|length=794bp
MGLNLRSVMKRARRCVPVALLYLVMSQEALAVRRNIQSTKAFIGNTRLAR
TSEMARRSSRSSNSFGSRVLAMKEGPCVNGVCPSKATALAMTALGLFSGL
APQAAQAADAPPALQQSMNRQAGVPSLVRYSDFLDMVEKGQIEKVTFSAD
GQKLVATDTDGQRYRLDALPNDPDLLATLTQKMVDVTVLPEQPKADGFNF
FQSILFPGLLFLGLFFLARRGGSGAGGGAGPGGMPGMGGQGPMEFSKSSA
KIMLTPDTGVTFDNVAGCDGAKMELTEVVDFLKNPEKYTDVGAKIPRGVI
LDGPPGTGKTLLAKAVAGESGVPFISAAGSEFVEMFVGVGASRVRDMFEQ
AKKNAPCIIFIDEIDAVGRQRGAGFAGGNDEREQTLNQLLTEMDGFEGNP
GIIVIAATNRADVLDQALLRPGRFDRRVTVDLPDFKGRTAILKVHSKGKP
LAPDVDLESISRRTPGFSGASLQNIMNEAAISAARADKSYVGWEEIDNAV
DRVLVGLEKRGADVPALRKELVAFHEAGHAIVGAVIPDYDMVQKVTIIPR
SNGAGGLTFFAPNEDRLESSMYTRQYLEAQLAVALGGRLAEELIFGADQV
TTGAMNDIQQVANIAKRMVTQFGMSDTVGPLGIGESGPVFMGRRMAEGVT
EWSQSLKKEVDDEVERLVSNAYNLAKDVLQKNMDLLYALADRLVEQETVT
AEEFAFMLLEYQVQMVPYAVYPNDSKMGDLPYYPDQMPGWKSGTNIRFSR
EVKGRMESEADKVLGASRLIGAGGGGGASVAPAAPASSPDAPAA back to topmRNA from alignment at CM002455.1:799290..802532- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna323 ID=rna323|Name=rna323|organism=Nannochloropsis gaditana|type=mRNA|length=3243bp|location=Sequence derived from alignment at CM002455.1:799290..802532- (Nannochloropsis gaditana)
TGCTGCATTCGTAGGCTGTGCCACCCAATTCTATCTATGCTCACAGCTGT
CATATTTGGAAGAAGAGAAGAACCACGATGACTCGGTCGCAATGCGCGCA
CGTGCGCCCCATCACGCAACTCCACACGCACGCCTCTAATGAACTCGATA
TATCCTTACCGCACAACTTGTTACAGATATGGGACTTAACTTGAGGTCCG
TCATGAAGCGCGCTCGGCGCTGCGTACCTGTGGCGTTGCTCTACCTGGTG
ATGAGCCAGGAAGCTCTTGCTGTTCGTCGGAATATCCAGTCGACAAAAGC
CTTTATTGGAAACACTCGGCTGGCCCGCACTTCCGAAATGGCACGTCGCA
GCAGTCGAAGCAGCAACAGCTTCGGTTCCCGCGTTCTGGCCATGAAGGAA
GGTCCTTGCGTCAACGGCGTTTGCCCCAGCAAGGCCACCGCTTTGGCTAT
GACTGCCCTCGGCCTCTTCTCCGGTCTTGCGCCCCAGGCCGCGCAAGCTG
CGGACGCACCTCCTGCACTTCAGCAAAGCATGAACAGGCAAGCGGGCGTG
CCGTCATTGGTGCGCTACAGTGACTTCTTGGACATGGTGGAGAAAGGACA
GATCGAGAAGGTCACGTTTTCGGCGGACGGACAAAAATTGGTCGCCACGG
ACACGGACGGTCAGCGCTACCGCCTGGACGCCCTGCCGAATGACCCTGAC
CTTCTCGCGACCCTGACGCAGAAGATGGTGGACGTAACAGTGCTCCCCGA
ACAACCCAAGGCCGACGGCTTTAACTTCTTCCAGTCCATCCTCTTCCCCG
GCCTCCTCTTCCTGGGGCTCTTCTTCTTGGCCCGCCGGGGCGGGTCGGGA
GCTGGCGGCGGTGCAGGACCTGGTGGAATGCCTGGCATGGGCGGCCAAGG
GCCGATGGAGTTTTCCAAGTCGTCGGCCAAGATCATGCTGACCCCCGACA
CCGGCGTCACCTTCGACAACGTTGCTGGCTGTGATGGCGCGAAAATGGAG
CTGACCGAGGTAGTTGACTTCCTCAAGAACCCCGAAAAATACACGGACGT
AGGCGCAAAGATCCCTCGCGGGGTGATCTTGGACGGACCCCCCGGGACGG
GTAAGACACTGCTGGCTAAAGCCGTCGCGGGGGAGTCGGGCGTGCCCTTC
ATCTCGGCCGCCGGCTCGGAGTTTGTTGAGATGTTTGTGGGGGTGGGTGC
CTCGCGTGTGCGCGATATGTTCGAACAGGCGAAGAAGAACGCGCCATGCA
TCATTTTTATCGACGAGATTGATGCCGTGGGCCGTCAGCGCGGGGCGGGC
TTTGCCGGAGGGAACGACGAGCGGGAGCAGACCCTGAACCAGCTGCTGAC
CGAGATGGACGGCTTCGAGGGCAACCCTGGGATCATCGTCATCGCCGCCA
CCAATCGTGCAGACGTCTTGGACCAGGCCTTGCTCCGCCCGGGCCGCTTC
GATCGTCGCGTCACAGTGGACTTGCCGGACTTCAAGGGCCGCACGGCTAT
CCTGAAGGTGCACTCGAAGGGGAAGCCCCTCGCCCCCGACGTAGACCTCG
AATCTATTTCTCGTCGCACACCAGGCTTTTCCGGTGCCTCCCTGCAGAAC
ATCATGAACGAGGCGGCCATCTCGGCCGCGCGCGCAGACAAGTCGTACGT
GGGGTGGGAGGAGATCGACAACGCGGTGGACCGTGTCTTGGTGGGACTGG
AGAAGCGAGGGGCGGACGTCCCGGCGCTGCGCAAGGAGCTTGTCGCCTTC
CACGAGGCCGGCCATGCGATCGTCGGGGCTGTCATCCCTGACTACGACAT
GGTCCAGAAGGTGACGATCATCCCTCGGTCGAACGGGGCCGGCGGCTTGA
CTTTCTTTGCCCCCAACGAGGACCGGCTGGAAAGTAGCATGTACACTCGC
CAGTACCTGGAGGCCCAGCTCGCGGTGGCCTTGGGAGGTCGCTTGGCGGA
GGAGCTGATCTTTGGAGCGGATCAAGTCACGACGGGCGCGATGAACGACA
TCCAACAGGTGGCCAACATCGCCAAGCGCATGGTCACGCAGTTCGGCATG
AGCGACACCGTGGGCCCTCTGGGGATCGGAGAGTCGGGCCCCGTGTTCAT
GGGCCGGCGCATGGCCGAGGGGGTGACAGAGTGGTCGCAGTCTCTGAAGA
AGGAGGTGGACGACGAGGTGGAGCGCCTTGTTTCCAACGCCTACAACTTG
GCCAAGGACGTGCTCCAGAAGAATATGGACCTCCTCTACGCGCTGGCGGA
TCGACTTGTGGAGCAGGAGACCGTGACGGCGGAAGAGTTCGCCTTCATGC
TTTTGGAGTACCAGGTACAGATGGTGCCTTACGCCGTATACCCCAACGAC
AGCAAGATGGGCGACCTGCCGTACTACCCGGACCAGATGCCAGGATGGAA
GTCGGGAACCAACATTCGTTTTTCCCGCGAGGTAAAGGGCCGCATGGAGA
GCGAAGCCGACAAGGTTCTGGGTGCCTCTCGTCTTATTGGCGCAGGTGGC
GGTGGAGGAGCTTCTGTCGCGCCTGCGGCCCCCGCGTCCTCTCCCGATGC
CCCAGCAGCGTGAATCTGATCCACGCATACAAGCACCGATCTTCGAGGAA
GCAGTTCGGCGAGCTATCGAGTTCTTATGCTGAGAGGAAGGGAGGAAACT
CAGACCCTGCTATTGGTACAATGATATCCGCTTGCGAAACAGGTTTAGGA
CGAGTAATAAGGTAATAGGGAAGACAGTGGTACCAATAGCGGTAAGAGTG
ACACCTGGAAAATCTTTGGTTGTTGTATAGCGAGCAAAAAGGCGTGCATG
GAGAGGATGCCATGCTTAGGTAACGACGAAGAGTACGACTTTTACCAGAC
ATATACGAGCTTGCGGCTCTCTCTGCCAGCAGCGATAGTGCCGTCACACT
CGACTAGGGAGGGACGAGTTGCAAGCAATACGCATGCCTGAGGAAGGGCG
TTTGTGCCCACTCTAGAATATACAAGGGAAGAATAAGTTGGTAGTTGACC
ACAAATAGTTCCATTTTTTTGGTTCGTGTCACGCGGCACTAAGGAGAAAA
CCGCTAGAAAGTTCACATTTGTCGCAATGGATGCCGACCCGCATGACCTC
CCTACCCGTTGCAGCAATTGAAATTGCCGATTGAATCATCCCCAGTCTTT
CCGGGAGGACGTTACTGAAAATATACCTTACACTCGCTCAGCATGTTATC
GGTCCCATGAAAACCACCCATCAGCCAATGAAGATGATGACTT back to topCoding sequence (CDS) from alignment at CM002455.1:799290..802532- >rna323 ID=rna323|Name=rna323|organism=Nannochloropsis gaditana|type=CDS|length=2385bp|location=Sequence derived from alignment at CM002455.1:799290..802532- (Nannochloropsis gaditana)
ATGGGACTTAACTTGAGGTCCGTCATGAAGCGCGCTCGGCGCTGCGTACC
TGTGGCGTTGCTCTACCTGGTGATGAGCCAGGAAGCTCTTGCTGTTCGTC
GGAATATCCAGTCGACAAAAGCCTTTATTGGAAACACTCGGCTGGCCCGC
ACTTCCGAAATGGCACGTCGCAGCAGTCGAAGCAGCAACAGCTTCGGTTC
CCGCGTTCTGGCCATGAAGGAAGGTCCTTGCGTCAACGGCGTTTGCCCCA
GCAAGGCCACCGCTTTGGCTATGACTGCCCTCGGCCTCTTCTCCGGTCTT
GCGCCCCAGGCCGCGCAAGCTGCGGACGCACCTCCTGCACTTCAGCAAAG
CATGAACAGGCAAGCGGGCGTGCCGTCATTGGTGCGCTACAGTGACTTCT
TGGACATGGTGGAGAAAGGACAGATCGAGAAGGTCACGTTTTCGGCGGAC
GGACAAAAATTGGTCGCCACGGACACGGACGGTCAGCGCTACCGCCTGGA
CGCCCTGCCGAATGACCCTGACCTTCTCGCGACCCTGACGCAGAAGATGG
TGGACGTAACAGTGCTCCCCGAACAACCCAAGGCCGACGGCTTTAACTTC
TTCCAGTCCATCCTCTTCCCCGGCCTCCTCTTCCTGGGGCTCTTCTTCTT
GGCCCGCCGGGGCGGGTCGGGAGCTGGCGGCGGTGCAGGACCTGGTGGAA
TGCCTGGCATGGGCGGCCAAGGGCCGATGGAGTTTTCCAAGTCGTCGGCC
AAGATCATGCTGACCCCCGACACCGGCGTCACCTTCGACAACGTTGCTGG
CTGTGATGGCGCGAAAATGGAGCTGACCGAGGTAGTTGACTTCCTCAAGA
ACCCCGAAAAATACACGGACGTAGGCGCAAAGATCCCTCGCGGGGTGATC
TTGGACGGACCCCCCGGGACGGGTAAGACACTGCTGGCTAAAGCCGTCGC
GGGGGAGTCGGGCGTGCCCTTCATCTCGGCCGCCGGCTCGGAGTTTGTTG
AGATGTTTGTGGGGGTGGGTGCCTCGCGTGTGCGCGATATGTTCGAACAG
GCGAAGAAGAACGCGCCATGCATCATTTTTATCGACGAGATTGATGCCGT
GGGCCGTCAGCGCGGGGCGGGCTTTGCCGGAGGGAACGACGAGCGGGAGC
AGACCCTGAACCAGCTGCTGACCGAGATGGACGGCTTCGAGGGCAACCCT
GGGATCATCGTCATCGCCGCCACCAATCGTGCAGACGTCTTGGACCAGGC
CTTGCTCCGCCCGGGCCGCTTCGATCGTCGCGTCACAGTGGACTTGCCGG
ACTTCAAGGGCCGCACGGCTATCCTGAAGGTGCACTCGAAGGGGAAGCCC
CTCGCCCCCGACGTAGACCTCGAATCTATTTCTCGTCGCACACCAGGCTT
TTCCGGTGCCTCCCTGCAGAACATCATGAACGAGGCGGCCATCTCGGCCG
CGCGCGCAGACAAGTCGTACGTGGGGTGGGAGGAGATCGACAACGCGGTG
GACCGTGTCTTGGTGGGACTGGAGAAGCGAGGGGCGGACGTCCCGGCGCT
GCGCAAGGAGCTTGTCGCCTTCCACGAGGCCGGCCATGCGATCGTCGGGG
CTGTCATCCCTGACTACGACATGGTCCAGAAGGTGACGATCATCCCTCGG
TCGAACGGGGCCGGCGGCTTGACTTTCTTTGCCCCCAACGAGGACCGGCT
GGAAAGTAGCATGTACACTCGCCAGTACCTGGAGGCCCAGCTCGCGGTGG
CCTTGGGAGGTCGCTTGGCGGAGGAGCTGATCTTTGGAGCGGATCAAGTC
ACGACGGGCGCGATGAACGACATCCAACAGGTGGCCAACATCGCCAAGCG
CATGGTCACGCAGTTCGGCATGAGCGACACCGTGGGCCCTCTGGGGATCG
GAGAGTCGGGCCCCGTGTTCATGGGCCGGCGCATGGCCGAGGGGGTGACA
GAGTGGTCGCAGTCTCTGAAGAAGGAGGTGGACGACGAGGTGGAGCGCCT
TGTTTCCAACGCCTACAACTTGGCCAAGGACGTGCTCCAGAAGAATATGG
ACCTCCTCTACGCGCTGGCGGATCGACTTGTGGAGCAGGAGACCGTGACG
GCGGAAGAGTTCGCCTTCATGCTTTTGGAGTACCAGGTACAGATGGTGCC
TTACGCCGTATACCCCAACGACAGCAAGATGGGCGACCTGCCGTACTACC
CGGACCAGATGCCAGGATGGAAGTCGGGAACCAACATTCGTTTTTCCCGC
GAGGTAAAGGGCCGCATGGAGAGCGAAGCCGACAAGGTTCTGGGTGCCTC
TCGTCTTATTGGCGCAGGTGGCGGTGGAGGAGCTTCTGTCGCGCCTGCGG
CCCCCGCGTCCTCTCCCGATGCCCCAGCAGCGTGA back to top
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