|
|
Properties
| Property Name | Value |
|---|
| Product | Nicotinamide N-methyltransferase, putative |
| Orig transcript id | gnl|cribi|Naga_100107g8.4512.mrna |
| Orig protein id | gnl|cribi|Naga_100107g8.4512 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1057805..1059578 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3229 ID=rna3229|Name=rna3229|organism=Nannochloropsis gaditana|type=mRNA|length=1819bp
GGTATTACTATAAGTGTCTATGACTCGCACTACACGAATTTCTTAGTCAC
CATAATAGCCTTCTTCCCCTACTTTACATGATCATCAAAGCAAGAACATA
ACAACAATCATCCATCAGGAACAAGAAGCAATGACCGAGGCCAGCCCTAA
TGACGTGCAAAGCTTCCTCCATGCAATGGAGATGAATGATGAGCGGTACT
TGACCCTTCTAGCCAAGCTCATCGGAGAAGCCGAAAACCTGCAAAACAAT
CCGCAGCAAGGCTTGGTTCCCCAAGAGAATCTGGCCGCCAACCACGTGCT
TGCTTTGCTGGAGCCGCACAGTAAAGAGAAAGGTGGCCCGCTTCTTATTG
AGCGCATCGAATTTACGCCGGGAAGGAGCAACTTGATCGTCAAGTACCCT
GGAACATCGGAGGCCACCACCGCCTTTGTGGGCTCGCACATGGACGTGGT
GCCTGCAAACCCTGAGGGCTGGGAGCGCAATCCTTTCGAACTCACGCGAG
AAGGCGATATGCTCTTTGGGCGGGGCACAACCGACTGCCTCGGTCACGTG
GCTCTCATCACGGAGCTCTTGGTCCAGATCGCAGAACACAGACCGGCGTT
GAAACGCAGCCTGATCGTTGTCTTCATTGCCAACGAGGAGAACAGCTCGG
TGCCTGGGATCGGGGTGGACGGACTCCTCAAGGCGGGGGCGCTCGAGCAG
ATCAAGAATGGTCCCCTCTTTTGGGTCGATTGCGCCGACTCCCAGCCCTG
TCTGGGCACCTGTGGCATGGTGTGCTGGAAACTCAAGGTCCATGGCCGCC
TTTTTCATAGTGGTCTTCCTCACAAGGCCATCAACCCCATCGAGCTGGGC
ACCGTCGCTCTGCAAGAAATTTTGAGGCGGTTCTATGCCGATTTCCCGAC
CCACTCCGAGGAGAGCAAGTACAACTACGTCGTGTCCTCCTCCATGAAAC
CAACACAGGTGGAATGCGCGCGCGGGAGTCTCAATCAGGTGCCTCCGCAT
GCCACTTTCAGCGGTGACATCCGTTCGGTCCCTTTCTATGAGATAAAGGA
TGTAAAGGCCAAGGTGGAAAGCTACGTCACCGATCTGAACCAGAACATCA
CCAGCCTTCCCTCCCTTGGCCCTTTTTCTTCCTACGTGGTTTCCTCCGAA
GACCCGCCCATTCGAGGCAAGCTAGAATTGGAATGGATCGGAGAGGGAGA
AAACGGGATTGCGGTCAAGCTGGGAACCGTGGGCAATATTGCCTTGACGG
AAGCGACCAAGGAAGTGCTGGGTTCCGTGACCCCGTACTCCATTACAGGC
TCGCTCCCATTGGTTCGGTACTTGCAAGATAACGACTTCGACGTCCAATT
AGTGGGCTATGGAAAAAGCGCCAAATACCACGCCGAAAACGAGGCAGCGG
ATTTGAAAGACTTCCGTCAGGCGCTGCGAATACTGGCAAGGGTGGTGGCG
CGCTTGGAGAAAGAATGAATGGGCAGGGAAAAAGGGGAGGTGTCAGTAGC
GCTCTTGCGAGAAGACAGACAATTAAAGATTCAGGGGTTATTGCAAGCGG
CTGTTACAACAAACTAAAAGCTCATGTCATAAAGTCTTTCTAGGAAATAG
GCGAAAGGCAAGGATCGCGATCGTTCGTATGTTTCACGCGATTGAAGGCA
GGTTTGATGTTTGCCTCAATCCCATGCATCTCTGTAGCTAAGGACGGTGA
CACAATGAAGTGTACCGGCGTGCGACATCATCAAATGGAAAAGAAAAAGT
TACGACCCGATGGTATGAAAACTTATCGTCGAGTCACGCATATGAGGAAC
TAAACTGAATCTAGATTGA back to topprotein sequence of rna3229 >rna3229-protein ID=rna3229-protein|Name=rna3229|organism=Nannochloropsis gaditana|type=polypeptide|length=298bp
MSSLPTIPSATNLVTSEGDENENEEEGNLLEELWPRETKPLLNYQVSFSN
GCTVNVPIVQDLMGRRYEMGIGNIVWDAAVAMHHFFQKEFPPGHFQGARV
LELGSGTGLVGITLTLLGAQVVLTDLPVFLPLLRNNVTTSLSSLSASDTA
CLPHPILPPLIEPLTWGQSLPLTSRRPYDYVIGSDITYCKEHLDDLLATL
TEPVPPSLPPLPPSLSSTGDTLDPSAPSSSSLPPCKGVVGPDTVVYIGHL
ERGDEHAFFERLRQRGMEVEEVWKEDVGEGGVARKLWVHVYRSWRNAN back to topmRNA from alignment at CM002460.1:1057805..1059578+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3229 ID=rna3229|Name=rna3229|organism=Nannochloropsis gaditana|type=mRNA|length=1774bp|location=Sequence derived from alignment at CM002460.1:1057805..1059578+ (Nannochloropsis gaditana)
AGCGACGCTCCAGCGAGTTCCACCATCAAATCGCCAGACGCACATTACTG
TCCCGTTGCCCCGAAACGATGCCCTTTACAAATACATTTGTCAAAGTAAA
ATCCCGGTGGCAATGAAAAACCCTTCATGATTCAACGGTTCTTTTTAAAA
ACGCAGCGGTTTACCCATCAAGCTCAGCTATGAGCTCCCTTCCCACTATC
CCCTCTGCGACAAACTTGGTGACTTCAGAGGGGGATGAGAATgaaaatga
agaggagggcaactTATTGGAGGAGCTGTGGCCCCGGGAGACCAAGCCTC
TGCTAAATTATCAAGTACGTTTGCCATGGAATTCGCCTATTGTGCAGGAC
GTGCCACGTATACGTCATTGCCGTTTAAATATGTTAAAACTTTCTCGCAT
GCCTGACACGTTCCCCTAGGTTTCATTTTCGAATGGATGTACTGTGAATG
TACCAATCGTCCAAGACCTTATGGGACGCCGGTATGAAATGGGAATCGGC
AACATTGTGGTATGTAAATGAGTCCCTATCATTGtaaacctccccccttg
acTTCGCTCACATCAGGATTCAAAGTCTCATCCCCAGCATAATTTTTACT
CAACATTGGCTGacgtccctttctttctatAACTGTATTTGTAGTGGGAC
GCTGCCGTCGCAATGCATCATTTTTTCCAAAAGGAATTTCCTCCTGGACA
CTTTCAGGGCGCACGCGTTCTGGAGCTCGGAAGCGGCACAGGCCTCGGTG
CGTAAATGGGAGCACCGTGCTGCTTGCATGCGAACATGTATGCCAGAAAT
CTCCATGTGATACAAGAGACCATGTGATGTACAGTTATGGGAACGACTTA
CCGCTTGAGCCGTCTGCGTCCTTTTCACCCTTTTGTTGCCTACCGTAACT
CTTTATTTCATGCCGCAGTTGGGATAACGCTGACTCTTCTCGGCGCTCAG
GTGGTCCTAACCGAtttgcccgtcttcctccccctccttcgaaaCAacgt
caccacctccctctcttccctttccgcctccgACACTGCgtgcctccctc
atcccatcctccctcctctcatcGAACCCTTGACCTGGggccagtccctc
cctctaacCTCCCGTCGACCCTACGACTACGTTATCGGTTCCGACATCAC
GTACTGCAAAGAGCACCTGGACGATCTCCTGGCCACGCTGACCGAACcag
tcccaccctcccttccccctctccctccctcactgtCTTCCACTGGGGAC
ACCCTGGacccctccgctccttcctcatcctccttacctccgtgcaaggg
cgtggtgggcCCTGACACGGTGGTATACATCGGCCATTTGGAGCGTGGGG
ATGAACATGCTTTCTTCGAGCGCCTTCGCCAGCGAGGGATGGAGGTAGAA
GAGGtatggaaggaggatgtgggggagggaggggtggcgCGGAAATTGTG
GGTGCATGTGTATCGATCTTGGAGGAACGCAAATTGAGACAAAAAGATTG
CGATCACGTTTCAGCACCTGGTGTATTGCCAGCTCCACTGTTAGACCACG
GCGAGGGCTTAGACATGTGTATTCATTATTGGCCGGGAGGCATTCCAGGA
AAGAGGAACTCCTCGGAGTCATAGTGAAGGGCCCACAAAGATGGGGACTG
TACGAGGATTGTGCAACTTAGACTGTGAAAGGGTACGAAAGGGTGTGGTA
CGACGTTTGAAAAAGTAgctggcgaggaaggaaagcacaaTAAGAAAGTC
CACATTGAAGAAGCCTAGTTATCC back to topCoding sequence (CDS) from alignment at CM002460.1:1057805..1059578+ >rna3229 ID=rna3229|Name=rna3229|organism=Nannochloropsis gaditana|type=CDS|length=3588bp|location=Sequence derived from alignment at CM002460.1:1057805..1059578+ (Nannochloropsis gaditana)
ATGAGCTCCCTTCCCACTATCCCCTCTGCGACAAACTTGGTGACTTCAGA
GGGGGATGAGAATgaaaatgaagaggagggcaactTATTGGAGGAGCTGT
GGCCCCGGGAGACCAAGCCTCTGCTAAATTATCAAGTTTCATTTTCGAAT
GGATGTACTGTGAATGTACCAATCGTCCAAGACCTTATGGGACGCCGGTA
TGAAATGGGAATCGGCAACATTGTGTGGGACGCTGCCGTCGCAATGCATC
ATTTTTTCCAAAAGGAATTTCCTCCTGGACACTTTCAGGGCGCACGCGTT
CTGGAGCTCGGAAGCGGCACAGGCCTCGTTGGGATAACGCTGACTCTTCT
CGGCGCTCAGGTGGTCCTAACCGAtttgcccgtcttcctccccctccttc
gaaaCAacgtcaccacctccctctcttccctttccgcctccgACACTGCg
tgcctccctcatcccatcctccctcctctcatcGAACCCTTGACCTGGgg
ccagtccctccctctaacCTCCCGTCGACCCTACGACTACGTTATCGGTT
CCGACATCACGTACTGCAAAGAGCACCTGGACGATCTCCTGGCCACGCTG
ACCGAACcagtcccaccctcccttccccctctccctccctcactgtCTTC
CACTGGGGACACCCTGGacccctccgctccttcctcatcctccttacctc
cgtgcaagggcgtggtgggcCCTGACACGGTGGTATACATCGGCCATTTG
GAGCGTGGGGATGAACATGCTTTCTTCGAGCGCCTTCGCCAGCGAGGGAT
GGAGGTAGAAGAGGtatggaaggaggatgtgggggagggaggggtggcgC
GGAAATTGTGGGTGCATGTGTATCGATCTTGGAGGAACGCAAATTGAATG
AGCTCCCTTCCCACTATCCCCTCTGCGACAAACTTGGTGACTTCAGAGGG
GGATGAGAATgaaaatgaagaggagggcaactTATTGGAGGAGCTGTGGC
CCCGGGAGACCAAGCCTCTGCTAAATTATCAAGTTTCATTTTCGAATGGA
TGTACTGTGAATGTACCAATCGTCCAAGACCTTATGGGACGCCGGTATGA
AATGGGAATCGGCAACATTGTGTGGGACGCTGCCGTCGCAATGCATCATT
TTTTCCAAAAGGAATTTCCTCCTGGACACTTTCAGGGCGCACGCGTTCTG
GAGCTCGGAAGCGGCACAGGCCTCGTTGGGATAACGCTGACTCTTCTCGG
CGCTCAGGTGGTCCTAACCGAtttgcccgtcttcctccccctccttcgaa
aCAacgtcaccacctccctctcttccctttccgcctccgACACTGCgtgc
ctccctcatcccatcctccctcctctcatcGAACCCTTGACCTGGggcca
gtccctccctctaacCTCCCGTCGACCCTACGACTACGTTATCGGTTCCG
ACATCACGTACTGCAAAGAGCACCTGGACGATCTCCTGGCCACGCTGACC
GAACcagtcccaccctcccttccccctctccctccctcactgtCTTCCAC
TGGGGACACCCTGGacccctccgctccttcctcatcctccttacctccgt
gcaagggcgtggtgggcCCTGACACGGTGGTATACATCGGCCATTTGGAG
CGTGGGGATGAACATGCTTTCTTCGAGCGCCTTCGCCAGCGAGGGATGGA
GGTAGAAGAGGtatggaaggaggatgtgggggagggaggggtggcgCGGA
AATTGTGGGTGCATGTGTATCGATCTTGGAGGAACGCAAATTGAATGAGC
TCCCTTCCCACTATCCCCTCTGCGACAAACTTGGTGACTTCAGAGGGGGA
TGAGAATgaaaatgaagaggagggcaactTATTGGAGGAGCTGTGGCCCC
GGGAGACCAAGCCTCTGCTAAATTATCAAGTTTCATTTTCGAATGGATGT
ACTGTGAATGTACCAATCGTCCAAGACCTTATGGGACGCCGGTATGAAAT
GGGAATCGGCAACATTGTGTGGGACGCTGCCGTCGCAATGCATCATTTTT
TCCAAAAGGAATTTCCTCCTGGACACTTTCAGGGCGCACGCGTTCTGGAG
CTCGGAAGCGGCACAGGCCTCGTTGGGATAACGCTGACTCTTCTCGGCGC
TCAGGTGGTCCTAACCGAtttgcccgtcttcctccccctccttcgaaaCA
acgtcaccacctccctctcttccctttccgcctccgACACTGCgtgcctc
cctcatcccatcctccctcctctcatcGAACCCTTGACCTGGggccagtc
cctccctctaacCTCCCGTCGACCCTACGACTACGTTATCGGTTCCGACA
TCACGTACTGCAAAGAGCACCTGGACGATCTCCTGGCCACGCTGACCGAA
CcagtcccaccctcccttccccctctccctccctcactgtCTTCCACTGG
GGACACCCTGGacccctccgctccttcctcatcctccttacctccgtgca
agggcgtggtgggcCCTGACACGGTGGTATACATCGGCCATTTGGAGCGT
GGGGATGAACATGCTTTCTTCGAGCGCCTTCGCCAGCGAGGGATGGAGGT
AGAAGAGGtatggaaggaggatgtgggggagggaggggtggcgCGGAAAT
TGTGGGTGCATGTGTATCGATCTTGGAGGAACGCAAATTGAATGAGCTCC
CTTCCCACTATCCCCTCTGCGACAAACTTGGTGACTTCAGAGGGGGATGA
GAATgaaaatgaagaggagggcaactTATTGGAGGAGCTGTGGCCCCGGG
AGACCAAGCCTCTGCTAAATTATCAAGTTTCATTTTCGAATGGATGTACT
GTGAATGTACCAATCGTCCAAGACCTTATGGGACGCCGGTATGAAATGGG
AATCGGCAACATTGTGTGGGACGCTGCCGTCGCAATGCATCATTTTTTCC
AAAAGGAATTTCCTCCTGGACACTTTCAGGGCGCACGCGTTCTGGAGCTC
GGAAGCGGCACAGGCCTCGTTGGGATAACGCTGACTCTTCTCGGCGCTCA
GGTGGTCCTAACCGAtttgcccgtcttcctccccctccttcgaaaCAacg
tcaccacctccctctcttccctttccgcctccgACACTGCgtgcctccct
catcccatcctccctcctctcatcGAACCCTTGACCTGGggccagtccct
ccctctaacCTCCCGTCGACCCTACGACTACGTTATCGGTTCCGACATCA
CGTACTGCAAAGAGCACCTGGACGATCTCCTGGCCACGCTGACCGAACca
gtcccaccctcccttccccctctccctccctcactgtCTTCCACTGGGGA
CACCCTGGacccctccgctccttcctcatcctccttacctccgtgcaagg
gcgtggtgggcCCTGACACGGTGGTATACATCGGCCATTTGGAGCGTGGG
GATGAACATGCTTTCTTCGAGCGCCTTCGCCAGCGAGGGATGGAGGTAGA
AGAGGtatggaaggaggatgtgggggagggaggggtggcgCGGAAATTGT
GGGTGCATGTGTATCGATCTTGGAGGAACGCAAATTGA back to top
|