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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100107g5.4508.mrna |
Orig protein id | gnl|cribi|Naga_100107g5.4508 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:1045288..1049070 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3226 ID=rna3226|Name=rna3226|organism=Nannochloropsis gaditana|type=mRNA|length=1990bp CTTCACTTCTGTAGTGAGTTTATGTCAGGTAAAGCACGGCTTCAACGTCT AGGGATCATAAAACTCGCCTTTGTTGGTGTCGTCTGCCTGCCTCTCCTAC TTGGACACACCGTCGCATTTCTCATCCAAGTGCATACCTGCAGTACAACA AACCCGTCGTCATCCCTCCGAATCGGCTTCACACGCAAAGCATGCCTTGT TGCTGCTAGCACACTGACAGGATCACGCACACGCCCCCGGCGTCGTGATC TTAAGATCGGTAAGCCACGCCCGGAAGTACCCGATGAGGCTGGCGATGAC GACGACTCAGAGGGGGGAGGAGGGAAAAGATGGGTGCGAGTGTACCCTCT CGGGCTGGGATCATACGGCGGACAGACGGCAGTTTTTTTAGGGCGGCGGA AAGAGGTCGAAAAAGAGAATGGTGGGCGCCTGGAGGCTTTGCCAGTACCG GTCTTCACCTCCGGCGACTTGGAGATGCTGCAAGCAGCATTTCGAGAAGC TGAACGAAGACGGAAAACGGAGGCGGAGGGATTGCAGAACAGCCGGGGCT CTAAGAGCCAATTCAAAGCATCTTCGATGTGGACGGGCAGGCATTTGTCC ACCAAAGACAACGGCTTTTTCGATAACGCGCCCTGGGAGTGGGCAGAAAG GATGGCTAGGGAGGCAGGAGAAAGCGGGCAGAGCGTGCCGACCGTTGCAG CGACGAATGTTAAAAAGGAAGCGTTCGACGCCTTTGTTTTCGGTAAGAAT GTACGGGCAGACTGGACCTCCTCTCCTTACGCACTGATGCTGCACGTCAT CACACGGGCCCTTGGCGCCGCGGTTTCGGAGCTGTTGATCGATGAGGAAG ACAGCCCCCGGGGTCCGGGAATTACCTTCGGTCCTGTACTTACATTGCAA GAGGAGGTGGGCACGGCACCCTCCGAGCAGGGGCGGGCCATGCTGGTAGA TTGCCTCATTGATGAGGTGGTGGGATTCGCCTTAGCGCTCAACCGAGCCA TCAAGATGCCCGTGGACCTGTACGAGGGGACGGCGGTAGCTTCCCGGGTC CTAGGACGGGGTTCTGATGATGGTATCCTGCAATTAGAGGCGGTGGGGGA GGGGGAAGAAGCGGCGGAGAGGCGGAAGGAGAACATGATGACGGTGATGG AAAACGTCCGGCCAGCATGGGAAATTTCATCGGTGGAGGCCTTTCGGAGC ATGGACAGTCGCAGCAAGAGGCTGTGCCTGATCAAAAGCGGGGCGGACGC GATCCCCAAGAGGAGACAAGGGCCCCAGGAACTCGACATTGCCCTGCTTC CCTACCTGGACGAAACTGTGCGCCGGGAAGCTCGCATTGCCTTGGCGGTA GAACGGGAGGATTGGAGCACCGTGTCAGCCTTGGAAGCGAACAAAAGCGA ACGTGGGCGGGTCAAGGACCGGTTGCGCGCGGCCCTGGCGGAAGGGAACG CCGCCGTGGTGGCCCGGTTGGAAGAGGAGTACGTCCGATTGACGGTGGCG AAGATGGATCCCACCCAGGACGAAGGCTCTTACCAGAAGGACTTGGACCA AGACGATTGGTACCTTAGAAGCCGACGGACATGATTGACGCGGTAGGTGG ATCGGGTTGGAGTTGGCATCTCGGAGAGCGAGGTGAGGAGGAGCCACCTT GAGGGCTGCTTAGCTTTTGATACGATTGGGAGATGGAAGGGCGAAGGGAG ACATAGATGTGACGCTTGGAGGGACAGAAATGATGAGAAGAAGGGGGGGC GTGACAGCATATGTGAAACAAGTCGTGAAAAGGAAGGCGTCGAAGTGGAA GAGTCCTACCCCTGGGAGCCAGAGATGCCTCCCTATCCACGGAAACTCCC AGGGTGCCTCATGTGCTCTTTGTGTGTAAACATCTTCCTACCCATCTAAT TTTGTCTGTCTTCTGGTACAAAAACATGCTGGGTTGCCCCTTGCTTCGTC CACGGTCATTTGACAATAAACCACTTCGATCTTGCAACGT back to topprotein sequence of rna3226 >rna3226-protein ID=rna3226-protein|Name=rna3226|organism=Nannochloropsis gaditana|type=polypeptide|length=1133bp MPHKTSRSGSVKTKPTTSIQDRKDCTSIAAAKRDVNVSGGVRETKAHAPP SLPEDTLLPPTAAPSAPPVPDKAESRAFNPQKENNPNRKHGTGSVTASAM KKKNARSDLSVKVSGFSAPILDWLSTGFLLQAAGASTVLNKFLTDLSKEY FGQILLQVQRQDAKGLREVLMQHAQEPRATALGVGMCATENNSGIKSKLV KSKDKITKRNGNETEQVGLTGPSSVLGPVALSWENTALSRLKHPVKGAWE AAKVYGPPLGPTPLALSGQATPETSDPDLKLAVLTKYKAFSPVLDPSLTA TAAATAQEWVESTTWMKKDGGGRFDKALDNLSALLSGMAAVYPSVRAALP TALEGLQKVQEVRNSLRSGEEGRGMGKEEVEGLIRWRVRRLLCQAWAGRK AKEKGEVLAAENALTALQTAMDAEDVQVGDFVRACRKEEETKIETADTKG QGGNDSEGVVDGRGELSERAVRNKEEEVEERTSMSAAESMSEQRAWEAHL KHHSGLSQAVASRIAAFRQWLQDGKAQDVIRDVLLLLRQHQHKETCLLPV DVHVLQENLGKAALVVGNPTLALSALDKAGKVGVCTEGDNPTLPPCVEYC PLALRLKALALEVKGEEEATKREGSAAEKTEDEPHATELALDVLGDLRKE DIERNDSVRRASYLTSAAVHTYHRLKRLSNGEGGQGEAPEKTRVVVERGL GLLEQARGMFDADRNEEGTEGGRWVSLVDPKWVSLSQDGDAMLWIQTNRL LAIFYAEPCLAPSLPHHHDLSIAAYQAALLPATRLLDGTLEAHSMVHTLR FELARAYARRGKNEQDEATCLALLREAEAALLPSQREEMGRLLHYTGRLL EEKGRKKVEDENEGGGEKELREAIELFGRAVEAFEGVRAKPKGEEERLNY MIGLNKSMAGIYVTLMKSMDKGCEGRSDGTEAGKEGGKDKNGQQQLSGKP SLFPSSPSLSPPKQAIWNADLEKAINRYTNAYTLLSAVAGGGGKASFEAG QVAFAIGDLYLQRRKEKRARNVENAIAWFEKAERDIRRSAPDRKDASGRY LPLYTQLYGKLAGLWHERAGLRKKEGGGSSGKVKEDLRKGEAYGVLFTNA RRNYELRADVLAGRMADGLRVEEEGKDRGKEER back to topmRNA from alignment at CM002460.1:1045288..1049070- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3226 ID=rna3226|Name=rna3226|organism=Nannochloropsis gaditana|type=mRNA|length=3783bp|location=Sequence derived from alignment at CM002460.1:1045288..1049070- (Nannochloropsis gaditana) GCTGTGACCAGGAATTGAATTGGACGTCTATGCCACACAAAACTAGTAGA
AGTGGCTCGGTCAAAACTAAGCCAACTACCTCAATTCAAGATAGAAAAGA
TTGTACATCGATAGCAGCCGCCAAAAGGGACGTCAATGTGTCTGGGGGCG
TAAGGGAGACTAAGGCACATGCTCCTCCCTCTCTTCCCGAGGATACTCTC
CTACCTCCTACCGCTGCGCCATCTGCGCCACCGGTACCAGACAAGGCGGA
AAGCAGAGCATTCAATCCTCAAAAGGAAAACAATCCTAATCGGAAACATG
GTACGGGGTCTGTCACAGCTTCCGCGATGAAGAAGAAAAACGCCAGAAGC
GACCTTTCCGTCAAAGTGTCGGGGTTCTCTGCGCCCATCCTTGATTGGCT
TAGCACAGGCTTCTTGCTCCAGGCAGCTGGGGCATCAACTGTCCTCAATA
AATTTTTGACGGATTTATCGAAAGAGTACTTTGGCCAGATACTCTTGCAG
GTTCAACGTCAAGATGCCAAAGGGTTGCGGGAGGTGCTTATGCAGCACGC
ACAAGAGCCACGTGCAACAGCCCTTGGCGTCGGTATGTGTGCAACAGAGA
ACAACAGCGGCATTAAAAGCAAGCTCGTTAAGAGTAAGGACAAGATCACT
AAGAGGAACGGGAACGAGACCGAGCAGGTGGGGCTGACAGGGCCGAGCTC
AGTCCTGGGTCCTGTCGCTCTGTCCTGGGAGAACACCGCGCTCAGCCGCT
TAAAACACCCGGTCAAAGGGGCTTGGGAAGCCGCGAAAGTCTACGGCCCT
CCTTTAGGACCTACCCCCCTGGCCCTTTCGGGGCAGGCGACCCCTGAAAC
GAGCGATCCCGACCTGAAGCTCGCCGTCCTCACCAAGTACAAGGCCTTTT
CTCCCGTGCTTGACCCCTCCCTCACCGCCACGGCGGCGGCAACAGCGCAG
GAGTGGGTGGAGTCTACCACGTGGATGAAGAAAGATGGAGGAGGAAGGTT
CGACAAAGCCTTGGACAACCTCTCGGCGCTGCTGAGCGGCATGGCAGCAG
TCTACCCGTCTGTGCGTGCTGCCCTCCCCACCGCCCTCGAGGGTTTGCAA
AAGGTTCAGGAGGTACGAAACAGCTTAAGAAGTGGGGAGGAAGGGAGAGG
GATGGGAAAAGAAGAGGTGGAAGGGCTGATCCGGTGGCGGGTGCGCAGAT
TACTGTGCCAAGCTTGGGCCGGTCGAAAAGCGAAGGAGAAGGGAGAGGTT
CTGGCTGCAGAGAATGCTCTGACAGCCTTACAGACAGCCATGGACGCCGA
GGATGTCCAGGTCGGCGATTTTGTCCGGGCGTGTAGGAAGGAAGAAGAAA
CGAAGATCGAGACCGCCGATACAAAGGGACAGGGGGGAAATGACAGCGAA
GGGGTGGTGGATGGGAGAGGCGAACTCTCTGAGAGGGCTGTGCGCAATAA
AGAGGAGGAGGTGGAAGAGAGGACCAGCATGAGTGCAGCGGAAAGCATGT
CGGAGCAGCGCGCCTGGGAGGCTCACCTCAAGCATCACTCAGGCCTCTCT
CAGGCCGTCGCCTCGCGCATTGCCGCCTTTCGACAGTGGTTGCAGGATGG
CAAGGCCCAAGACGTGATCCGAGACGTCCTCCTTTTGCTTCGACAGCACC
AACACAAGGAGACTTGCCTCCTTCCCGTCGATGTGCACGTGTTGCAGGAG
AACCTAGGCAAGGCGGCCTTGGTGGTGGGAAATCCGACCCTGGCCCTGTC
GGCGCTCGACAAGGCGGGGAAGGTGGGCGTCTGTACTGAAGGGGACAACC
CTACCCTGCCTCCTTGCGTGGAGTATTGTCCCCTGGCGCTGCGTTTGAAA
GCCCTCGCATTGGAAGTCAAAGGAGAGGAGGAGGCGACCAAGCGGGAAGG
GAGCGCGGCGGAGAAGACAGAAGACGAGCCGCACGCGACCGAGTTGGCAC
TGGACGTATTGGGGGACCTGAGGAAGGAGGATATAGAGAGAAACGACAGT
GTGAGGCGTGCGAGTTACTTGACCTCGGCGGCGGTGCATACGTACCACCG
GCTCAAACGCTTGAGCAATGGCGAAGGTGGCCAGGGAGAAGCTCCGGAGA
AGACACGAGTTGTAGTGGAGCGAGGGCTTGGCCTCTTGGAGCAGGCGCGG
GGCATGTTTGACGCGGACAGGAATGAGGAAGGGACAGAGGGTGGTCGATG
GGTGAGCCTCGTCGATCCGAAATGGGTGTCCCTGTCCCAAGACGGAGACG
CCATGCTCTGGATCCAAACCAACCGGCTGTTGGCCATCTTTTATGCGGAA
CCCTGCCTCGCTCCCTCCCTCCCACATCACCATGACCTCTCCATCGCCGC
CTACCAAGCTGCCCTCCTCCCTGCCACCCGCCTCTTAGATGGGACCCTGG
AGGCCCATTCCATGGTTCATACGCTTCGATTTGAACTCGCGAGAGCCTAC
GCGCGGCGCGGTAAGAACGAGCAGGACGAAGCAACCTGCCTTGCCCTCTT
GAGAGAGGCGGAAGCTGCTTTGCTGCCCTCGCAGAGGGAGGAGATGGGGC
GGCTTTTGCATTACACCGGGCGACTATTGGAGGAAAAGGGTCGCAAAAAA
GTGGAGGATGAGAATGAAGGCGGGGGCGAAAAGGAATTGCGGGAGGCAAT
AGAATTGTTTGGACGGGCTGTGGAGGCTTTCGAGGGTGTACGGGCGAAGC
CAAAGGGAGAGGAGGAGCGACTCAATTACATGATTGGATTGAACAAAAGC
ATGGCCGGCATCTATGTCACATTGATGAAAAGCATGGACAAAGGGTGTGA
AGGCAGGTCCGACGGAACAGAAGCGGGGAAAGAAGGAGGGAAGGACAAAA
ACGGGCAGCAACAGCTGTCCGGGAAGCCCTCTTTATTCCCGTCCTCGCCG
TCTCTGTCGCCTCCCAAACAGGCGATTTGGAACGCAGATTTGGAGAAAGC
CATCAACAGGTACACAAATGCTTACACTCTTTTGAGTGCAGTGGCGGGAG
GAGGCGGGAAAGCCTCCTTCGAAGCGGGCCAAGTAGCTTTTGCCATCGGA
GACTTGTACCTGCAACGTCGGAAGGAAAAACGGGCGCGGAATGTTGAAAA
TGCGATCGCTTGGTTTGAAAAAGCTGAGCGGGACATCCGCCGAAGTGCTC
CAGATCGGAAAGATGCGAGTGGGCGGTACTTACCGTTGTACACACAATTA
TACGGGAAGCTGGCTGGCTTGTGGCACGAGCGCGCGGGGTTGCGAAAAAA
GGAGGGAGGAGGGAGCAGTGGAAAAGTGAAGGAAGATTTGAGAAAAGGGG
AGGCGTACGGTGTACTGTTTACGAATGCAAGAAGAAATTACGAATTGCGG
GCGGACGTGTTGGCGGGCAGGATGGCAGATGGACTGAGAGTAGAGGAAGA
GGGGAAGGATAGGGGAAAAGAGGAGCGTTGACGGGCAACATCACAGAAAG
AATGATGTTTTGGTGCTCTGGCAATGGTTCCGCGACTGATGCGAGGAAAG
GAAAGCGGATTAGAATTAGGCACACTTCATTACAAAAAAAACTTTGAAAA
TAAAGGGAAACCGCCATGCAACGTAGGACTGCGATAACCATTGTCAGAAA
GGAAATGTGGAGAAGAGAGCTACCGGAAATCTCACGTTGCAAGATCGAAG
TGGTTTATTGTCAAATGACCGTGGACGAAGCAAGGGGCAACCCAGCATGT
TTTTGTACCAGAAGACAGACAAAATTAGATGGGTAGGAAGATGTTTACAC
ACAAAGAGCACATGAGGCACCCTGGGAGTTTCC back to topCoding sequence (CDS) from alignment at CM002460.1:1045288..1049070- >rna3226 ID=rna3226|Name=rna3226|organism=Nannochloropsis gaditana|type=CDS|length=3402bp|location=Sequence derived from alignment at CM002460.1:1045288..1049070- (Nannochloropsis gaditana) ATGCCACACAAAACTAGTAGAAGTGGCTCGGTCAAAACTAAGCCAACTAC CTCAATTCAAGATAGAAAAGATTGTACATCGATAGCAGCCGCCAAAAGGG ACGTCAATGTGTCTGGGGGCGTAAGGGAGACTAAGGCACATGCTCCTCCC TCTCTTCCCGAGGATACTCTCCTACCTCCTACCGCTGCGCCATCTGCGCC ACCGGTACCAGACAAGGCGGAAAGCAGAGCATTCAATCCTCAAAAGGAAA ACAATCCTAATCGGAAACATGGTACGGGGTCTGTCACAGCTTCCGCGATG AAGAAGAAAAACGCCAGAAGCGACCTTTCCGTCAAAGTGTCGGGGTTCTC TGCGCCCATCCTTGATTGGCTTAGCACAGGCTTCTTGCTCCAGGCAGCTG GGGCATCAACTGTCCTCAATAAATTTTTGACGGATTTATCGAAAGAGTAC TTTGGCCAGATACTCTTGCAGGTTCAACGTCAAGATGCCAAAGGGTTGCG GGAGGTGCTTATGCAGCACGCACAAGAGCCACGTGCAACAGCCCTTGGCG TCGGTATGTGTGCAACAGAGAACAACAGCGGCATTAAAAGCAAGCTCGTT AAGAGTAAGGACAAGATCACTAAGAGGAACGGGAACGAGACCGAGCAGGT GGGGCTGACAGGGCCGAGCTCAGTCCTGGGTCCTGTCGCTCTGTCCTGGG AGAACACCGCGCTCAGCCGCTTAAAACACCCGGTCAAAGGGGCTTGGGAA GCCGCGAAAGTCTACGGCCCTCCTTTAGGACCTACCCCCCTGGCCCTTTC GGGGCAGGCGACCCCTGAAACGAGCGATCCCGACCTGAAGCTCGCCGTCC TCACCAAGTACAAGGCCTTTTCTCCCGTGCTTGACCCCTCCCTCACCGCC ACGGCGGCGGCAACAGCGCAGGAGTGGGTGGAGTCTACCACGTGGATGAA GAAAGATGGAGGAGGAAGGTTCGACAAAGCCTTGGACAACCTCTCGGCGC TGCTGAGCGGCATGGCAGCAGTCTACCCGTCTGTGCGTGCTGCCCTCCCC ACCGCCCTCGAGGGTTTGCAAAAGGTTCAGGAGGTACGAAACAGCTTAAG AAGTGGGGAGGAAGGGAGAGGGATGGGAAAAGAAGAGGTGGAAGGGCTGA TCCGGTGGCGGGTGCGCAGATTACTGTGCCAAGCTTGGGCCGGTCGAAAA GCGAAGGAGAAGGGAGAGGTTCTGGCTGCAGAGAATGCTCTGACAGCCTT ACAGACAGCCATGGACGCCGAGGATGTCCAGGTCGGCGATTTTGTCCGGG CGTGTAGGAAGGAAGAAGAAACGAAGATCGAGACCGCCGATACAAAGGGA CAGGGGGGAAATGACAGCGAAGGGGTGGTGGATGGGAGAGGCGAACTCTC TGAGAGGGCTGTGCGCAATAAAGAGGAGGAGGTGGAAGAGAGGACCAGCA TGAGTGCAGCGGAAAGCATGTCGGAGCAGCGCGCCTGGGAGGCTCACCTC AAGCATCACTCAGGCCTCTCTCAGGCCGTCGCCTCGCGCATTGCCGCCTT TCGACAGTGGTTGCAGGATGGCAAGGCCCAAGACGTGATCCGAGACGTCC TCCTTTTGCTTCGACAGCACCAACACAAGGAGACTTGCCTCCTTCCCGTC GATGTGCACGTGTTGCAGGAGAACCTAGGCAAGGCGGCCTTGGTGGTGGG AAATCCGACCCTGGCCCTGTCGGCGCTCGACAAGGCGGGGAAGGTGGGCG TCTGTACTGAAGGGGACAACCCTACCCTGCCTCCTTGCGTGGAGTATTGT CCCCTGGCGCTGCGTTTGAAAGCCCTCGCATTGGAAGTCAAAGGAGAGGA GGAGGCGACCAAGCGGGAAGGGAGCGCGGCGGAGAAGACAGAAGACGAGC CGCACGCGACCGAGTTGGCACTGGACGTATTGGGGGACCTGAGGAAGGAG GATATAGAGAGAAACGACAGTGTGAGGCGTGCGAGTTACTTGACCTCGGC GGCGGTGCATACGTACCACCGGCTCAAACGCTTGAGCAATGGCGAAGGTG GCCAGGGAGAAGCTCCGGAGAAGACACGAGTTGTAGTGGAGCGAGGGCTT GGCCTCTTGGAGCAGGCGCGGGGCATGTTTGACGCGGACAGGAATGAGGA AGGGACAGAGGGTGGTCGATGGGTGAGCCTCGTCGATCCGAAATGGGTGT CCCTGTCCCAAGACGGAGACGCCATGCTCTGGATCCAAACCAACCGGCTG TTGGCCATCTTTTATGCGGAACCCTGCCTCGCTCCCTCCCTCCCACATCA CCATGACCTCTCCATCGCCGCCTACCAAGCTGCCCTCCTCCCTGCCACCC GCCTCTTAGATGGGACCCTGGAGGCCCATTCCATGGTTCATACGCTTCGA TTTGAACTCGCGAGAGCCTACGCGCGGCGCGGTAAGAACGAGCAGGACGA AGCAACCTGCCTTGCCCTCTTGAGAGAGGCGGAAGCTGCTTTGCTGCCCT CGCAGAGGGAGGAGATGGGGCGGCTTTTGCATTACACCGGGCGACTATTG GAGGAAAAGGGTCGCAAAAAAGTGGAGGATGAGAATGAAGGCGGGGGCGA AAAGGAATTGCGGGAGGCAATAGAATTGTTTGGACGGGCTGTGGAGGCTT TCGAGGGTGTACGGGCGAAGCCAAAGGGAGAGGAGGAGCGACTCAATTAC ATGATTGGATTGAACAAAAGCATGGCCGGCATCTATGTCACATTGATGAA AAGCATGGACAAAGGGTGTGAAGGCAGGTCCGACGGAACAGAAGCGGGGA AAGAAGGAGGGAAGGACAAAAACGGGCAGCAACAGCTGTCCGGGAAGCCC TCTTTATTCCCGTCCTCGCCGTCTCTGTCGCCTCCCAAACAGGCGATTTG GAACGCAGATTTGGAGAAAGCCATCAACAGGTACACAAATGCTTACACTC TTTTGAGTGCAGTGGCGGGAGGAGGCGGGAAAGCCTCCTTCGAAGCGGGC CAAGTAGCTTTTGCCATCGGAGACTTGTACCTGCAACGTCGGAAGGAAAA ACGGGCGCGGAATGTTGAAAATGCGATCGCTTGGTTTGAAAAAGCTGAGC GGGACATCCGCCGAAGTGCTCCAGATCGGAAAGATGCGAGTGGGCGGTAC TTACCGTTGTACACACAATTATACGGGAAGCTGGCTGGCTTGTGGCACGA GCGCGCGGGGTTGCGAAAAAAGGAGGGAGGAGGGAGCAGTGGAAAAGTGA AGGAAGATTTGAGAAAAGGGGAGGCGTACGGTGTACTGTTTACGAATGCA AGAAGAAATTACGAATTGCGGGCGGACGTGTTGGCGGGCAGGATGGCAGA TGGACTGAGAGTAGAGGAAGAGGGGAAGGATAGGGGAAAAGAGGAGCGTT GA back to top
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