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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101093g1.2623.mrna |
| Orig protein id | gnl|cribi|Naga_101093g1.2623 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1032053..1032884 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3221 ID=rna3221|Name=rna3221|organism=Nannochloropsis gaditana|type=mRNA|length=775bp
TGGTCGCGTCGTGCGTTTAATGCCGCACTTCCCGTAATTTGCCTTCCTCA
ACTTGTGTACACGTCCTACAAGTATGCAGGGCTTTTCACGCAGCCACGGC
ACCGACAGCAACAGCGGTAGCAACAATCGCGAAAGCGGTGCTTTGTTCTA
CAATAACATGGACTATCGCAGCTTGCAGGACACTGCTTTGTCACGCGGGA
GTCAGGAGCATCAGGATGGAGCGGCAGGCGCGGGTTCCTGCCGCCAGCTC
CATGGCATTGACGGCTTGGATTTTCACTCGCGCTGGCGCACAACCCAGCT
GCGGCCGGCGGTCTTCTCATTGGTGAACACAGGTATGTCGCTTATGGACA
GGGTAGATCCTATCGAAGCTTCCGCTGCGTGAGCGTTTTTGGTAAGAAGC
GGACGGGCAAAGAGTAGCGTCCAACATCCTTTTGAAGGGCGATCAAAGCA
TGCGACCATGTACGATTGAGGGGTGGTTGAAGTTTCTGTATCCCCACCTG
CCTCTCTACGGCACTGATTTTCTTCCTTTCCCTGCACACAACCCCTCCAC
ACGGCTTGCCGCCTCCCCACATTGTCTTCTCCCTCTCGCACCAGTGGTGG
GGGGGGGGACGCTTTCGCTGGCCTACTCCTTCGCCAAGGCGGGGAGTGTG
GTAGGCATATTGGTCCTAGCGCTGATCTGTGTTGCCACTGACTTCTCTCT
CTTTGCCATGGTCTCTGCCAGCCGCCGCACGGGCCAGAAGTCGTACGAAG
GGGTCATGAAGGCCGGTACGTGGGC back to topprotein sequence of rna3221 >rna3221-protein ID=rna3221-protein|Name=rna3221|organism=Nannochloropsis gaditana|type=polypeptide|length=158bp
PPPPPPPPPICHLHVPPPHEPPPALPPSRPPSRPPSPHPYQRHAPPPPPP
PHLLAPPPHPFPGHTGRLGGEHMGRPGLLCLLCHLLRPSPPCLLTRGLSG
ATGETGLGLVCVRGGGYPDPFVRHQYGRGAAQVVREGAAVAEGGGEGRRR
KAVRRAMT back to topmRNA from alignment at CM002460.1:1032053..1032884+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3221 ID=rna3221|Name=rna3221|organism=Nannochloropsis gaditana|type=mRNA|length=832bp|location=Sequence derived from alignment at CM002460.1:1032053..1032884+ (Nannochloropsis gaditana)
cctcctcctcctcctcctcctcctcccatttgTCACCTCcacgttcctcc
cccccacgaaccacctcccgccctccctccctcccgccctccctcccgcc
ctccctccccccatccctaCCAACGCCAcgcaccgcctccccctcctcct
cctcacctacttgctcctcctccccatccttttcctggccATACGGGTCG
ACTCGGTGGCGAGCATATGGGCCGTCCTGGGCTCCTTTGCCTGCTTTgcc
atctccttcgtccttcccccccttgcttaCTTACGCGTGGGCTGTCGGGA
GCAACGGGTGAAACGGGCTTGGGCCTGGTGTGTGTGCGTGGGGGGGGCTA
TCCTGACCCTTTTGTGCGGCATCAATACGGTCGGGGAGCTGCTCAAgtcg
tgagggagggcgcggcggtggccgagggcgggggggagggccgtcGGCGG
AAAGCGGTCAGGAGGGCCATGACGtgatggggcgggaaggaaggaaagtg
tGGATAACGCTAGCTATCGAGTGGGGAGATGGGGACGCGACACGTACCTG
CcctgaggggggaggaagggatagaGATCAAGGCCGGAGCCTGCCTCTTC
TGGGTTccccccctgctttcccctcaAGCCCTTTCCGGGcgtgggagcgg
gagggaggcaaacGGCAAAGTGATTTCGCCAAAATGCAGACGAGGTCGTC
TTCAATGAGTCTTTCGGTACATCAATGCCTCCAGTCATGTATAGATAGGG
CCTGTCCCATACACTGTGAATAGACTCCCTGTAACCGAAGAAGCCCGCAG
GCACGACAGCGTGCCCAAAGACACCGACCTCG back to topCoding sequence (CDS) from alignment at CM002460.1:1032053..1032884+ >rna3221 ID=rna3221|Name=rna3221|organism=Nannochloropsis gaditana|type=CDS|length=477bp|location=Sequence derived from alignment at CM002460.1:1032053..1032884+ (Nannochloropsis gaditana)
cctcctcctcctcctcctcctcctcccatttgTCACCTCcacgttcctcc
cccccacgaaccacctcccgccctccctccctcccgccctccctcccgcc
ctccctccccccatccctaCCAACGCCAcgcaccgcctccccctcctcct
cctcacctacttgctcctcctccccatccttttcctggccATACGGGTCG
ACTCGGTGGCGAGCATATGGGCCGTCCTGGGCTCCTTTGCCTGCTTTgcc
atctccttcgtccttcccccccttgcttaCTTACGCGTGGGCTGTCGGGA
GCAACGGGTGAAACGGGCTTGGGCCTGGTGTGTGTGCGTGGGGGGGGCTA
TCCTGACCCTTTTGTGCGGCATCAATACGGTCGGGGAGCTGCTCAAgtcg
tgagggagggcgcggcggtggccgagggcgggggggagggccgtcGGCGG
AAAGCGGTCAGGAGGGCCATGACGtga back to top
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