rna3205, rna3205 (mRNA) Nannochloropsis gaditana

Overview
Namerna3205
Unique Namerna3205
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1367
Alignment locationCM002460.1:995751..997174 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100174g9.7290.mrna
Orig protein idgnl|cribi|Naga_100174g9.7290
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:995751..997174 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100174g9gene3083Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3205rna3205-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27475.1cds3197Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3205 ID=rna3205|Name=rna3205|organism=Nannochloropsis gaditana|type=mRNA|length=1367bp
CACACACACACACACACACACACACACACACATACGAAGTAAATTTATCC
CTGAGACCAACAATATTGTTCCCATTATCCTTTACTTGCTGACTTCATCC
TCTCCTTCGCATGGTCACAGGAGGAGCGGCGGAGTCACGAACGAGGAGGC
CTTCCTCATTACACTCCATTTGCTTCCTGTCTCCCCGACCTTGTCGCATG
CCACGTAGTCGCAGCCGAAGCCGTAGCCGTAGCTTACATCGACAGCGGAA
GAGGAGCGGGAGTCGGAGCAGATATGGCACTTCTTCCCCATTATCCTCGT
CACGATACCACAGTCCCCATCGGGGGGGGGACCAGAAAGGTCAAAGCCGC
AGGAGGAGACGAAGCCAAGAGAGTGAGGAAGGGGACAGAGATCGTAGAAG
GAGGCATCGAGGTTTAGAAAGGGAAGAATCCCCTGCGCCAGGAGGGGGGA
ACCAGGCTCAGGGGCAAAGGTCACGGTGGGAAAAGGGCCGAGGAAGGCAG
GAGGGCCTCTCAGGCGGGGAGAACGGAGGGAACGGGCGCTACGAAGAGGA
GAGGAGGGATATCAGCCTGCAGGAGCGTGAAAGGGACGGTCGTGGCGCAC
GACTCAGGAAAAGCACCGAGGCAAGAGCCCAGGCAGGCGCAGGGAGAGAG
CGCGAGGCTTTAGTCCCGGGCGGAGAGCCGTCCCGTGGGCAAGAAGAACG
CTATGAATGGGGCAAGCCCGCCATCTCCCCGTTGAACGGCGATGCGTCAA
GCAGAGGGGAGGACGGAGGAAAGGGGGAGGAGAAAGCACCGACCTTGGTG
GCCAAACCCAATTTCGGCCTGACTGGCGCGCTGGCACAAGATGCTCAGAC
GGGGAACGTGTACAAGGGCGTGGTGTTGAAGTGGAGCGAGCCGGACGACG
CCCGCCTCCCCTCGCGGGGCTGGCGGTTGTACGTGTTCAAACAGGGGGAG
TTGAAGGACACCCTTCACTTGCACCGTCAGAGCGCCTACCTGGTGGGGCG
GCACGGTGTGGCCGATCTGAAGGTGGAACATCCTTCCTGTTCCAAGCAGC
ACGCCGTCCTCCAGTTCCGCCAAAAGCATGAGGGGGCCGAGGTGAAACCC
TACCTGATGGATCTGGAGTCCGTGAACAAGACCAGGCTGAATGGGGAGGA
GGTTCCCCCCGCCCGGTACGTGGAACTGCGGGCGCAGGACACGATCCAAT
TCGGCCTTTCCTCGCGGGAATACGTGCTTATGCACGAGAGCCTGGTCGGG
TCGAGCTAATGGACAGACGCAGAGGAGGTTGGGGAGGAACGAGGGGAGGG
TCTGGGGGGGGGAACGGTCGCCCTGAACCGGGTGGACACGAAAGGGAAAA
GAAAGAAACGGTTGAGC
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protein sequence of rna3205

>rna3205-protein ID=rna3205-protein|Name=rna3205|organism=Nannochloropsis gaditana|type=polypeptide|length=385bp
MDRTYTTWAQWVLTSQFASSSIEVEASLAPFSDVSVQSMEWEMSFTAQKL
MQARRMQELQMVERNIAIDRDGGGSNKDKDLHDRLSGSDSEEYNDEESAI
SLLRGRAKHIYPARRAGGSRENGPSRENRVERGRERPPWVQRPLSLFLGA
CFPCLLLARAASLLARSPMNAGNRGKSPCNGLDMDGWKTCLSAAVVAMAC
PLPCLWPSLWWWRKRQRHRILQRFSHFPDPVPTSSSGTSGSDGRKMGVLT
ACQLCAPCPLVSEVAFLEEVERLQREKEMLSGSTGTEGDDENECLDPGKS
MATCNLRSDSALRDSPAKPFPPTPAEGKKENGGKRRDSVAQWQAFESWDL
RPVGGGTTAVAATGPSLRAVENEKDTRTNWDRGKE
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mRNA from alignment at CM002460.1:995751..997174-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3205 ID=rna3205|Name=rna3205|organism=Nannochloropsis gaditana|type=mRNA|length=1424bp|location=Sequence derived from alignment at CM002460.1:995751..997174- (Nannochloropsis gaditana)
ATGGACAGGACTTATACTACCTGGGCACAATGGTATGGCATTTCCTCCTG
GGCGGAAGAAAGCACATGCTTTATTCCCTTCAATTACCTGGCGCGTCTTG
ACTACGTGCATCTTGATGAGTGTTCAGCGAGTGCTCTTTGCGAACGGAAC
ATGGACTCACACTTATTTTTTAATGGATTAAAACTTTGATATGCACACAC
CGATAGACCATGCTTGAGACAACGAACGTCTCGCGCGAGCATCAAGACAA
GGTAGATTTTGGCCGACGCGCTAAATCGACAGGATTTTAGCCGTCCAGGG
TTTTAACCTCCCAGTTTGCTTCCTCTTCGATAGAGGTTGAGGCCAGCTTA
GCACCCTTCTCAGACGTATCGGTTCAAAGCATGGAGTGGGAAATGAGTTT
CACAGCTCAAAAGCTGATGCAAGCGCGGCGGATGCAGGAATTGCAGATGG
TGGAGCGAAACATCGCTATAGACAGGGACGGAGGAGGGAGCAATAAAGAC
AAGGACTTGCATGATAGGTTAAGCGGAAGTGACAGCGAGGAGTACAACGA
CGAAGAATCAGCAATTTCACTACTACGTGGAAGAGCAAAGCATATTTATC
CTGCGCGGAGAGCGGGTGGAAGCAGGGAAAATGGCCCCTCTAGGGAAAAT
CGGGTTGAGCGCGGAAGGGAACGGCCACCCTGGGTACAGCGCCCTCTCTC
CCTTTTCCTGGGGGCCTGCTTCCCCTGCCTTCTCCTTGCACGTGCCGCAA
GTCTACTGGCGCGAAGCCCGATGAATGCAGGTAACAGGGGCAAGTCGCCG
TGTAACGGCTTAGACATGGATGGGTGGAAAACCTGTCTTTCCGCGGCCGT
CGTGGCCATGGCGTGCCCGTTGCCCTGCCTGTGGCCCTCTTTGTGGTGGT
GGAGGAAGCGACAGCGCCACCGGATCCTCCAGCGCTTCTCTCACTTCCCC
GACCCTGTCCCCACGTCTTCCTCCGGCACATCCGGGTCAGATGGCCGGAA
GATGGGCGTGCTAACGGCCTGTCAGCTGTGTGCCCCCTGCCCTCTGGTAA
GCGAAGTCGCCTTCTTGGAAGAGGTAGAGAGACTCCAGAGGGAGAAGGAG
ATGCTCTCAGGCAGCACGGGGACGGAAGGTGACGACGAGAACGAGTGTCT
GGATCCAGGCAAGTCCATGGCAACGTGCAACCTGAGGAGCGACAGTGCCT
TGAGAGATTCGCCCGCGAAGCCTTTCCCTCCGACCCCCGCCGAGGGAAAA
AAGGAAAATGGGGGTAAGCGGAGGGATTCTGTGGCACAATGGCAGGCGTT
TGAGAGCTGGGATCTCCGCCCGGTGGGTGGCGGGACCACCGCCGTCGCGG
CGACTGGACCGAGCCTGCGGGCGGTGGAAAACGAGAAGGATACCCGGACA
AATTGGGATAGGGGGAAGGAGTGA
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Coding sequence (CDS) from alignment at CM002460.1:995751..997174-

>rna3205 ID=rna3205|Name=rna3205|organism=Nannochloropsis gaditana|type=CDS|length=2316bp|location=Sequence derived from alignment at CM002460.1:995751..997174- (Nannochloropsis gaditana)
GGTTTTAACCTCCCAGTTTGCTTCCTCTTCGATAGAGGTTGAGGCCAGCT
TAGCACCCTTCTCAGACGTATCGGTTCAAAGCATGGAGTGGGAAATGAGT
TTCACAGCTCAAAAGCTGATGCAAGCGCGGCGGATGCAGGAATTGCAGAT
GGTGGAGCGAAACATCGCTATAGACAGGGACGGAGGAGGGAGCAATAAAG
ACAAGGACTTGCATGATAGGTTAAGCGGAAGTGACAGCGAGGAGTACAAC
GACGAAGAATCAGCAATTTCACTACTACGTGGAAGAGCAAAGCATATTTA
TCCTGCGCGGAGAGCGGGTGGAAGCAGGGAAAATGGCCCCTCTAGGGAAA
ATCGGGTTGAGCGCGGAAGGGAACGGCCACCCTGGGTACAGCGCCCTCTC
TCCCTTTTCCTGGGGGCCTGCTTCCCCTGCCTTCTCCTTGCACGTGCCGC
AAGTCTACTGGCGCGAAGCCCGATGAATGCAGGTAACAGGGGCAAGTCGC
CGTGTAACGGCTTAGACATGGATGGGTGGAAAACCTGTCTTTCCGCGGCC
GTCGTGGCCATGGCGTGCCCGTTGCCCTGCCTGTGGCCCTCTTTGTGGTG
GTGGAGGAAGCGACAGCGCCACCGGATCCTCCAGCGCTTCTCTCACTTCC
CCGACCCTGTCCCCACGTCTTCCTCCGGCACATCCGGGTCAGATGGCCGG
AAGATGGGCGTGCTAACGGCCTGTCAGCTGTGTGCCCCCTGCCCTCTGGT
AAGCGAAGTCGCCTTCTTGGAAGAGGTAGAGAGACTCCAGAGGGAGAAGG
AGATGCTCTCAGGCAGCACGGGGACGGAAGGTGACGACGAGAACGAGTGT
CTGGATCCAGGCAAGTCCATGGCAACGTGCAACCTGAGGAGCGACAGTGC
CTTGAGAGATTCGCCCGCGAAGCCTTTCCCTCCGACCCCCGCCGAGGGAA
AAAAGGAAAATGGGGGTAAGCGGAGGGATTCTGTGGCACAATGGCAGGCG
TTTGAGAGCTGGGATCTCCGCCCGGTGGGTGGCGGGACCACCGCCGTCGC
GGCGACTGGACCGAGCCTGCGGGCGGTGGAAAACGAGAAGGATACCCGGA
CAAATTGGGATAGGGGGAAGGAGTGAATGGACAGGACTTATACTACCTGG
GCACAATGGGTTTTAACCTCCCAGTTTGCTTCCTCTTCGATAGAGGTTGA
GGCCAGCTTAGCACCCTTCTCAGACGTATCGGTTCAAAGCATGGAGTGGG
AAATGAGTTTCACAGCTCAAAAGCTGATGCAAGCGCGGCGGATGCAGGAA
TTGCAGATGGTGGAGCGAAACATCGCTATAGACAGGGACGGAGGAGGGAG
CAATAAAGACAAGGACTTGCATGATAGGTTAAGCGGAAGTGACAGCGAGG
AGTACAACGACGAAGAATCAGCAATTTCACTACTACGTGGAAGAGCAAAG
CATATTTATCCTGCGCGGAGAGCGGGTGGAAGCAGGGAAAATGGCCCCTC
TAGGGAAAATCGGGTTGAGCGCGGAAGGGAACGGCCACCCTGGGTACAGC
GCCCTCTCTCCCTTTTCCTGGGGGCCTGCTTCCCCTGCCTTCTCCTTGCA
CGTGCCGCAAGTCTACTGGCGCGAAGCCCGATGAATGCAGGTAACAGGGG
CAAGTCGCCGTGTAACGGCTTAGACATGGATGGGTGGAAAACCTGTCTTT
CCGCGGCCGTCGTGGCCATGGCGTGCCCGTTGCCCTGCCTGTGGCCCTCT
TTGTGGTGGTGGAGGAAGCGACAGCGCCACCGGATCCTCCAGCGCTTCTC
TCACTTCCCCGACCCTGTCCCCACGTCTTCCTCCGGCACATCCGGGTCAG
ATGGCCGGAAGATGGGCGTGCTAACGGCCTGTCAGCTGTGTGCCCCCTGC
CCTCTGGTAAGCGAAGTCGCCTTCTTGGAAGAGGTAGAGAGACTCCAGAG
GGAGAAGGAGATGCTCTCAGGCAGCACGGGGACGGAAGGTGACGACGAGA
ACGAGTGTCTGGATCCAGGCAAGTCCATGGCAACGTGCAACCTGAGGAGC
GACAGTGCCTTGAGAGATTCGCCCGCGAAGCCTTTCCCTCCGACCCCCGC
CGAGGGAAAAAAGGAAAATGGGGGTAAGCGGAGGGATTCTGTGGCACAAT
GGCAGGCGTTTGAGAGCTGGGATCTCCGCCCGGTGGGTGGCGGGACCACC
GCCGTCGCGGCGACTGGACCGAGCCTGCGGGCGGTGGAAAACGAGAAGGA
TACCCGGACAAATTGGGATAGGGGGAAGGAGTGAATGGACAGGACTTATA
CTACCTGGGCACAATG
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Synonyms
Publications