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Properties
| Property Name | Value |
|---|
| Product | malate dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100855g2.1137.mrna |
| Orig protein id | gnl|cribi|Naga_100855g2.1137 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:974158..976418 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3196 ID=rna3196|Name=rna3196|organism=Nannochloropsis gaditana|type=mRNA|length=1657bp
GCCAAAATCAGGACAGTCGGTGAATTGGCCATGCCGAGGGCTGGCTTGCG
TGGGTGTGTCGTCCTTGTCTGGCGTGGGATTAAACTCAGCACGTGGTTGC
TTTGACTCGGAGCCGGCGCTCGCTCCCAGCGACGGCTTGAAGAAGACGAG
GCACATGGAAAAAGCACGCCACCGAAACAGGGCCCAGCGCACGGCGTGGC
ACACGTCGATGCCCCAATCATGACTTGACGACAACGTGCTCTCTGTCCGT
CGCATGGGACTGGGATTTCTCCGACCCTTTCAAAGAAACGGACGAAGCTT
TGTGCCGGCTGCTTGTGTGAGGAGGAAGTAGCAACTACGCCCTCGTTCGC
TTGCTCAACTTATAAAGGTTTCAAATCATTCCCGTCCTCTGCTTTCGACA
GGCATATGGCGATGCGTCCAATCCTTATTGCTTTTCTTCTTCTGGTGCTA
TTGCCCATGCAAAAGGCCTTCCTGGTTAGGGCAGTGCCAGCCATCCCTGT
ATATCAACCTCCTCCACCCTGCTATATGGCTGTGCACGGTGCAGGGGACG
CTATTTCCGCACCGAGTGGCGCAAGTGTGTCCCTTCTCGCTGGACCTTTC
TCTCAGATCGTGCACAGTCGGTTTTCCAACACCCATTACGCTTCCCACAA
ACCTGTGCATATTTCGACCTTGAATGAGCTTCTCCGCTTGACCCAGCGGG
CCCCTTCTTCGTTTAATATCCAGCCGTTCAAACTGGTTGTCATCCGAGAT
CCCACCCTCCGCGACAAGGTCGGCCATCAAGCTATGCTGGGTGCCAACGG
CAACCGTGTTCGGACCGCGCCGGTCACCGTGGTGTTTGCGGCGGACGTGG
AGAGCAGCCGATTGATGCCCCAGGTGGTGGCGCTCCTGCGCCAGGCCGGC
ACGTTTCCCGAAGGATTTTTGAAGAAGATACCTTTCTTTGCCAACCTTTT
TTCTACCGGGTATCCTTTCTCCCTGCTTCGATGGTGCTTGTATTGGGGCA
AGCGCGTGGCAATGCACGTGGTCGGGTGGTTTAAAGCGGTGCCACGATTG
GAACGCCCGGAGACCTGGGCCGTGAAGAACACGATGCTGGCCGCCATGAC
CTTCATGCTGGCTGCTTCCTCCCACGGCCTCACCACCTGCCCCATGGAAG
GCTTCGACGCCCGGCGACTGCGGCATTTGCTCGGGCTTCCGACTCGGTAC
GTGCTCCCGGTGGTGGTCTCCCTGGGATATGCGGCCACCCCGGGGGAAGA
AGCGGCGCAGGGCGGGAAGGAGGGGCACGCGGTCTCCTCCAAGCAACCTC
CCCCCTCCCTGCGCTTTCCCATGGAGGAGGTGGTTTGTGAGGAGGCGTAC
GGCCGACCCTGGAAGGGCGTGGCGTAGGAAGGGAAATAGAAAAGGAGGAA
GGAGGGAGGGAAGGAGGGAAGAGGAGGGAAGGCGGAGGGAGGGGAGGAAG
GAGGAAAAAGGGAAAGAGCGAAGCCTGCGGCCGGAGATGTACAAAACCAT
AAAATTGCCTAAGCGGGATCTAAAGCAATGATTGAGAGTCGGAAGCCGCC
ATTTTCCCGTCACATTCTTCCTTTCCTCGCTCCCTCCCTCTCGCGCTTAA
AATGCTGCTCAGGGAGACGATTGACGACACCAAGATCGAAGGAGATACGA
AAAGGTC back to topprotein sequence of rna3196 >rna3196-protein ID=rna3196-protein|Name=rna3196|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MFAARSSLRPAAMGAVACAVRSISSTKATAARVAVVGASGGIGQPLSMLL
KLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVTGYKGADSIHAALEGCD
VIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEASAKVAPKACYLIISNPV
NSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVAENQGTDVLQTNV
TVVGGHAGTTILPLLSQVKGASFTPDALAALTHRIQFGGDEVVKAKDGAG
SATLSMAYAGYLFTAKLLQALKGEKDVVACAFVENTLTAAPFFAAPVTLG
KEGVEKVHALGSLSAMEQEALEKALPDLLAQAKKGVEFVQNAK back to topmRNA from alignment at CM002460.1:974158..976418+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3196 ID=rna3196|Name=rna3196|organism=Nannochloropsis gaditana|type=mRNA|length=2261bp|location=Sequence derived from alignment at CM002460.1:974158..976418+ (Nannochloropsis gaditana)
GGCCCTGTTTCGGTGGCGTGCTTTTTCCATgtgcctcgtcttcttcaaGC
CGTCGCTGGGAGCGAGCGCCGGCTCCGAGTCAAAGCAACCACGTGCTGAG
TTTAATCCCACGCCAGACAAGGACGACACACCCACGCAAGCCAGCCCTCG
GCATGGCCAATTCACCGACTGTCCTGATTTTGGCACGCAGTGCATGCGTG
CACAGCAGTTTATGCTCTGGGCTTGTGAACGCATGTGAATCCCTGCTTAG
ACGAGAACATCTCCAACTCGCCAGTCCCCCTCAACCTGCGTGCATctgcc
ttcccgcccctccaatGTCCTTCCCGTGTCACAGATAGCGTCCGACTCAA
GCAGACATCATGTTCGccgcccgttcctcccttcgccctgcTGCCATGGG
CGCTGTGGCCTGTGCCGTgcgctccatttcctccacgaAAGCGACGGCAG
CCCGGGTTGCAGTTGTCGGCGCATCTGGCGGTATCGGGCAACCTTTATCC
ATGCTACTCAAATTGGACCCCAGCATCAAGGAATTGAACCTGTACGACAT
CGTCCATACACCCGGTGTGGCTGCAGACCTTTCTcacatccctttccccg
ccaaAGTGACTGGCTACAAGGGCGCAGATTCCATCCACGCCGCCCTGGAG
GGATGCGACGTGATCGTGGTTCCCGCGGGTGTTCCTCGTAAACCAGGCAT
GACCCGAGACGACCTTTTCAACATCAACGCCGGTATCGTCAAGACCATTG
CAGAGGCCTCCGCCAAAGTGGCTCCCAAGGCCTGTTACCTCATCATCTCC
AACCCGGTGAATTCCACCGTCCCCATTTTTGCGGAGGTCTTGAAGAAGGT
AGGTCTGAGGGGGTGGCAAGACAGGGCGTGCGATCATGGGCCAAGATGCA
GGACATGGACGTCTGGAAGCACGGAGGGTGGCACAGGGGGCGCCGCTGAC
ATGACGTACCCGGCTGGCGTGCGTGGAtgttggggggggagggggaagag
gagatgaagaggaggtaaagaggaggacgggggccgCTCGTTCCGCTCAA
AGGCGCTGTGGACGCACCGGGCCTTCCAGTTGCGCAGGTCGCTCCAGCGA
CGCATCTCGTCCGTCGCCTTGATACTGCCAACACACAagcccactctccc
tccctccctccctccctccctccctccctccctcccttcctccctccctc
cctccctccctcgcccggcAGGCAGGAACGTACAATCCGAAGAAACTCTT
CGGCGTGACCACCCTGGACGTGATCCGCGCCAACACTTTTGTGGCCGAGA
ACCAGGGCACCGACGTCCTCCAGACCAACGTCACGGTCGTGGGGGGGCAC
GCAGGGACgaccatccttcccctcctctcccaagtCAAGggcgcctcctt
cacccccgATGCCCTGGCAGCCCTGACGCACCGGATCCAGTTCGGCGGGG
ACGAGGTGGTAAAGGCGAAGGACGGGGCAGGCTCGGCCACCCTGTCAATG
GCCTACGCCGGCTACTTGTTCACGGCGAAGCTCCTCCAGGCgttgaaggg
ggagaaagatgTGGTGGCCTGTGCCTTCGTCGAGAACACTTTGACCGCCG
CGCCTTTCTTCGCGGCCCCCGTTACCCTgggcaaagagggcgtggagaaa
GTGCACGCGTTGGGCAGCCTGTCGgcgatggagcaggaggctcTGGAGAA
GGCCCTGCCGGACTTGCTGGCgcaggcgaagaagggggtggagtTTGTCC
AGAACGCCAAGTGAGGGacggggcgaggcggggggagaggggtccGGGAG
TAGTCCCTGGTAGGGAGAAATTTTTTGACGCGGTTACAtgaggggagcga
ggagggagggaggggaggcgtgggaCGGGATGCCGAGGGGATttagggaa
gagagggagtgctaggggagacaggaagccaggaagggggagaagggaag
gacgacaACGCCCTCCGCGCCAGGTCCCCCTTGCCGCCGTTTGCTCTCCA
CGGCGTCATTTTACCGTTTGGATCCCTTGTTGAATTTCTTTTAaatccct
ttttccctttcggAGGCTCGTTAGGAATAAAGCAAGCATTGCTGTGCGAT
CCTCGCTCGCTCTTATTTTGTCACGCGCCGTCTCCGTGGActttcccctg
ctcccctccttcccgccctcctccccaccctccttcccgccctccttccg
ctcctcctATTCACAAATGTGcctgctgcccctctccttccttcactcta
tctcccctccc back to topCoding sequence (CDS) from alignment at CM002460.1:974158..976418+ >rna3196 ID=rna3196|Name=rna3196|organism=Nannochloropsis gaditana|type=CDS|length=2064bp|location=Sequence derived from alignment at CM002460.1:974158..976418+ (Nannochloropsis gaditana)
ATGTTCGccgcccgttcctcccttcgccctgcTGCCATGGGCGCTGTGGC
CTGTGCCGTgcgctccatttcctccacgaAAGCGACGGCAGCCCGGGTTG
CAGTTGTCGGCGCATCTGGCGGTATCGGGCAACCTTTATCCATGCTACTC
AAATTGGACCCCAGCATCAAGGAATTGAACCTGTACGACATCGTCCATAC
ACCCGGTGTGGCTGCAGACCTTTCTcacatccctttccccgccaaAGTGA
CTGGCTACAAGGGCGCAGATTCCATCCACGCCGCCCTGGAGGGATGCGAC
GTGATCGTGGTTCCCGCGGGTGTTCCTCGTAAACCAGGCATGACCCGAGA
CGACCTTTTCAACATCAACGCCGGTATCGTCAAGACCATTGCAGAGGCCT
CCGCCAAAGTGGCTCCCAAGGCCTGTTACCTCATCATCTCCAACCCGGTG
AATTCCACCGTCCCCATTTTTGCGGAGGTCTTGAAGAAGGCAGGAACGTA
CAATCCGAAGAAACTCTTCGGCGTGACCACCCTGGACGTGATCCGCGCCA
ACACTTTTGTGGCCGAGAACCAGGGCACCGACGTCCTCCAGACCAACGTC
ACGGTCGTGGGGGGGCACGCAGGGACgaccatccttcccctcctctccca
agtCAAGggcgcctccttcacccccgATGCCCTGGCAGCCCTGACGCACC
GGATCCAGTTCGGCGGGGACGAGGTGGTAAAGGCGAAGGACGGGGCAGGC
TCGGCCACCCTGTCAATGGCCTACGCCGGCTACTTGTTCACGGCGAAGCT
CCTCCAGGCgttgaagggggagaaagatgTGGTGGCCTGTGCCTTCGTCG
AGAACACTTTGACCGCCGCGCCTTTCTTCGCGGCCCCCGTTACCCTgggc
aaagagggcgtggagaaaGTGCACGCGTTGGGCAGCCTGTCGgcgatgga
gcaggaggctcTGGAGAAGGCCCTGCCGGACTTGCTGGCgcaggcgaaga
agggggtggagtTTGTCCAGAACGCCAAGTGAATGTTCGccgcccgttcc
tcccttcgccctgcTGCCATGGGCGCTGTGGCCTGTGCCGTgcgctccat
ttcctccacgaAAGCGACGGCAGCCCGGGTTGCAGTTGTCGGCGCATCTG
GCGGTATCGGGCAACCTTTATCCATGCTACTCAAATTGGACCCCAGCATC
AAGGAATTGAACCTGTACGACATCGTCCATACACCCGGTGTGGCTGCAGA
CCTTTCTcacatccctttccccgccaaAGTGACTGGCTACAAGGGCGCAG
ATTCCATCCACGCCGCCCTGGAGGGATGCGACGTGATCGTGGTTCCCGCG
GGTGTTCCTCGTAAACCAGGCATGACCCGAGACGACCTTTTCAACATCAA
CGCCGGTATCGTCAAGACCATTGCAGAGGCCTCCGCCAAAGTGGCTCCCA
AGGCCTGTTACCTCATCATCTCCAACCCGGTGAATTCCACCGTCCCCATT
TTTGCGGAGGTCTTGAAGAAGGCAGGAACGTACAATCCGAAGAAACTCTT
CGGCGTGACCACCCTGGACGTGATCCGCGCCAACACTTTTGTGGCCGAGA
ACCAGGGCACCGACGTCCTCCAGACCAACGTCACGGTCGTGGGGGGGCAC
GCAGGGACgaccatccttcccctcctctcccaagtCAAGggcgcctcctt
cacccccgATGCCCTGGCAGCCCTGACGCACCGGATCCAGTTCGGCGGGG
ACGAGGTGGTAAAGGCGAAGGACGGGGCAGGCTCGGCCACCCTGTCAATG
GCCTACGCCGGCTACTTGTTCACGGCGAAGCTCCTCCAGGCgttgaaggg
ggagaaagatgTGGTGGCCTGTGCCTTCGTCGAGAACACTTTGACCGCCG
CGCCTTTCTTCGCGGCCCCCGTTACCCTgggcaaagagggcgtggagaaa
GTGCACGCGTTGGGCAGCCTGTCGgcgatggagcaggaggctcTGGAGAA
GGCCCTGCCGGACTTGCTGGCgcaggcgaagaagggggtggagtTTGTCC
AGAACGCCAAGTGA back to top
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